Павел Бочаров

Mr. Павел Бочаров

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Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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25 January 2021 in Molecules
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Journal Article
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Sergei BoichukSergei Boichuk
Sergei Boichuk
AGAigul Galembikova
Aigul Galembikova
FBFiryuza Bikinieva
Firyuza Bikinieva
PDPavel Dunaev
Pavel Dunaev
AAAida Aukhadieva
Aida Aukhadieva
ПБПавел Бочаров
Павел Бочаров
Microtubules are known as the most attractive molecular targets for anti-cancer drugs. However, the number of serious limitations of the microtubule targeting agents (MTAs) including poor bioavailability, adverse effects (e.g., systemic and neural toxicity), and acquired resistance after initiation of MTA-based therapy remain the driving forces to develop the novel therapeutic agents effectively targeting microtubules and exhibiting potent anti-tumor activities. Here, we report the discovery of 2-amino-pyrrole-carboxamides (2-APCAs), a novel class of MTA, which effectively inhibited the growth of the broad spectrum of cancer cell lines in vitro, including various types of breast, prostate, and non-small lung cancer (NSLC), soft tissue sarcomas (STS) (e.g., leio-, rhabdomyo-, and fibrosarcomas), osteosarcomas and gastrointestinal stromal tumors (GISTs). Importantly, 2-APCAs were also effective in cancer cell lines exhibiting resistance to certain chemotherapeutic agents, including MTAs and topoisomerase II inhibitors. The anti-proliferative effect of 2-APCAs was due to their ability to interfere with the polymerization of tubulin and thereby leading to the accumulation of tumor cells in the M-phase. As an outcome of the mitotic arrest, cancer cells underwent apoptotic cell death which was evidenced by increased expression of cleaved forms of the poly-ADP-ribose polymerase (PARP) and caspase-3 and the increased numbers of Annexin V-positive cells, as well. Among the compounds exhibiting the potent anti-cancer activities against the various cancer cell lines indicated above, 2-APCA-III was found the most active. Importantly, its cytotoxic activities correlated with its highest potency to interfere with the dynamics of tubulin polymerization and inducement of cell cycle arrest in the G2/M phase. Interestingly, the cytotoxic and tubulin polymerization activities of 2-APCAs correlated with the stability of the «tubulin—2-АРСА» complexes, illustrating the “tubulin-2-APCA-III” complex as the most stable. Molecular docking showed that the binding site for 2-АРСА-III is located in α tubulin by forming a hydrogen bond with Leu23. Of note, single-cell electrophoresis (Comet assay) data illustrated the low genotoxic activities of 2-APCAs when compared to certain anti-cancer chemotherapeutic agents. Taken together, our study describes the novel MTAs with potent anti-proliferative and pro-apoptotic activities, thereby illustrating them as a scaffold for the development of successful chemotherapeutic anti-cancer agent targeting microtubules.

1 April 2020 in Journal of Molecular Liquids
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Journal Article
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LALyubov A. Antina
Lyubov A. Antina
Alexander A. KsenofontovAlexander A. Ksenofontov
Alexander A. Ksenofontov
ПБПавел Бочаров
Павел Бочаров
NKNadezhda V. Kharitonova
Nadezhda V. Kharitonova
AKAlexandr V Kazak
Alexandr V Kazak
MBMikhail B. Berezin
Mikhail B. Berezin

1 January 2019 in Journal of Photochemistry and Photobiology A: Chemistry
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Journal Article
Closed access
Alexander A. KsenofontovAlexander A. Ksenofontov
Alexander A. Ksenofontov
ПБПавел Бочаров
Павел Бочаров
EAElena V. Antina
Elena V. Antina

1 September 2019 in Journal of Photochemistry and Photobiology A: Chemistry
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Journal Article
Closed access
Alexander A. KsenofontovAlexander A. Ksenofontov
Alexander A. Ksenofontov
SSSvetlana A. Stupikova
Svetlana A. Stupikova
ПБПавел Бочаров
Павел Бочаров
MLMikhail M. Lukanov
Mikhail M. Lukanov
KKKsenia V. Ksenofontova
Ksenia V. Ksenofontova
EAElena V. Antina
Elena V. Antina

16 November 2022 in Molecules
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KKKsenia V. Ksenofontova
Ksenia V. Ksenofontova
AKAnastasia A. Kerner
Anastasia A. Kerner
Alexander A. KsenofontovAlexander A. Ksenofontov
Alexander A. Ksenofontov
ASArtyom Yu. Shagurin
Artyom Yu. Shagurin
ПБПавел Бочаров
Павел Бочаров
MYMarfin Yuriy
Marfin Yuriy
A boron-dipyrromethene (BODIPY) derivative reactive towards amino groups of proteins (NHS-Ph-BODIPY) was synthesized. Spectroscopic and photophysical properties of amine-reactive NHS-Ph-BODIPY and its non-reactive precursor (COOH-Ph-BODIPY) in a number of organic solvents were investigated. Both fluorescent dyes were characterized by green absorption (521–532 nm) and fluorescence (538–552 nm) and medium molar absorption coefficients (46,500–118,500 M−1·cm−1) and fluorescence quantum yields (0.32 – 0.73). Solvent polarizability and dipolarity were found to play a crucial role in solvent effects on COOH-Ph-BODIPY and NHS-Ph-BODIPY absorption and emission bands maxima. Quantum-chemical calculations were used to show why solvent polarizability and dipolarity are important as well as to understand how the nature of the substituent affects spectroscopic properties of the fluorescent dyes. NHS-Ph-BODIPY was used for fluorescent labeling of a number of proteins. Conjugation of NHS-Ph-BODIPY with bovine serum albumin (BSA) resulted in bathochromic shifts of absorption and emission bands and noticeable fluorescence quenching (about 1.5 times). It was demonstrated that the sensitivity of BSA detection with NHS-Ph-BODIPY was up to eight times higher than with Coomassie brilliant blue while the sensitivity of PII-like protein PotN (PotN) detection with NHS-Ph-BODIPY and Coomassie brilliant blue was almost the same. On the basis of the molecular docking results, the most probable binding sites of NHS-Ph-BODIPY in BSA and PotN and the corresponding binding free energies were estimated.

30 October 2022 in Biomolecules
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Alexander A. KsenofontovAlexander A. Ksenofontov
Alexander A. Ksenofontov
ПБПавел Бочаров
Павел Бочаров
Elena V. AntinaElena V. Antina
Elena V. Antina
OSOksana G. Shevchenko
Oksana G. Shevchenko
ASAleksandr Samorodov
Aleksandr Samorodov
Liliya E. NikitinaLiliya E. Nikitina
Liliya E. Nikitina
Natural monoterpenes and their derivatives are widely considered as effective ingredients for the design and production of new biologically active compounds with high antioxidant, antimicrobial and anti-protozoa properties. In this study, we synthesized two series of thiotherpenoids “sulfide-sulfoxide-sulfone”, with different bicyclic monoterpene skeleton (bornane and pinane) structures. The effect of the obtained compounds on platelet aggregation was investigated by using the molecular docking technique. The obtained data revealed that all the synthesized compounds may act as potential inhibitors of platelet aggregation. Moreover, the studied sulfides have shown high antioxidant activity as revealed by lipid peroxidation (LPO) process inhibition in a non-cellular substrate containing animal lipids. The sulfides were able to inhibit erythrocyte oxidative hemolysis, to reduce the accumulation of secondary LPO products in cells and to prevent the oxidation of native oxyhemoglobin. Additionally, the corresponding sulfones and sulfoxides exhibited insignificant antioxidant activity. However, the sulfides were found to exhibit significant antiaggregant and anticoagulant effects. These findings suggest as well that the sulfides could serve as a leader compound for future research and possible practical applications.