Ammar Hoori

Dr. Ammar Hoori


Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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12 September 2019 in IEEE Transactions on Industrial Electronics
Verified
Journal Article
Closed access
AHAmmar Hoori
Ammar Hoori
AKAhmad Al Kazzaz
Ahmad Al Kazzaz
RKRameez Khimani
Rameez Khimani
YMYuichi Motai
Yuichi Motai
AAAlex J. Aved
Alex J. Aved
In this paper, a new approach to short term load forecasting (STLF) is proposed using a Multi-Column Radial Basis Function Neural Network (MCRN). The advantage of this new approach over similar models in speed and accuracy is also discussed, especially in regards to renewable generation forecasting. Because weather and seasonal effects have a direct impact not only on load demand but also on renewable energy production, it follows, that as the penetration rate of renewable DG increases, the grid will become even more sensitive to weather impacts in the long term. In our approach, we use a k-d tree algorithm to split our feature rich data set, into dense, specialized subsets. These subsets are then trained in parallel as multiple Artificial Neural Network (ANN) using a modified error correction (ErrCor) algorithm to form the MCRN. This approach reduces the number of hidden neurons, increases the speed of convergence, and improves generalization over similar, alternative forecasting methods.

20 January 2017 in IEEE Transactions on Neural Networks and Learning Systems
Verified
Journal Article
Open access
AHAmmar Hoori
Ammar Hoori
YMYuichi Motai
Yuichi Motai
This paper proposes the multicolumn RBF network (MCRN) as a method to improve the accuracy and speed of a traditional radial basis function network (RBFN). The RBFN, as a fully connected artificial neural network (ANN), suffers from costly kernel inner-product calculations due to the use of many instances as the centers of hidden units. This issue is not critical for small datasets, as adding more hidden units will not burden the computation time. However, for larger datasets, the RBFN requires many hidden units with several kernel computations to generalize the problem. The MCRN mechanism is constructed based on dividing a dataset into smaller subsets using the k-d tree algorithm. N resultant subsets are considered as separate training datasets to train N individual RBFNs. Those small RBFNs are stacked in parallel and bulged into the MCRN structure during testing. The MCRN is considered as a well-developed and easy-to-use parallel structure, because each individual ANN has been trained on its own subsets and is completely separate from the other ANNs. This parallelized structure reduces the testing time compared with that of a single but larger RBFN, which cannot be easily parallelized due to its fully connected structure. Small informative subsets provide the MCRN with a regional experience to specify the problem instead of generalizing it. The MCRN has been tested on many benchmark datasets and has shown better accuracy and great improvements in training and testing times compared with a single RBFN. The MCRN also shows good results compared with those of some machine learning techniques, such as the support vector machine and k-nearest neighbors.

28 August 2024 in JACC: Advances
Verified
Journal Article
Open access
THTao Hu
Tao Hu
JFJoshua Freeze
Joshua Freeze
PSPrerna Singh
Prerna Singh
JKJustin Kim
Justin Kim
YSYingnan Song
Yingnan Song
AHAmmar Hoori
Ammar Hoori
Recent studies have used basic epicardial adipose tissue (EAT) assessments (eg, volume and mean Hounsfield unit [HU]) to predict risk of atherosclerosis-related, major adverse cardiovascular events (MACEs). The purpose of this study was to create novel, hand-crafted EAT features, “fat-omics,” to capture the pathophysiology of EAT and improve MACE prediction. We studied a cohort of 400 patients with low-dose cardiac computed tomography calcium score examinations. We purposefully used a MACE-enriched cohort (56% event rate) for feature engineering purposes. We divided the cohort into training/testing sets (80%/20%). We segmented EAT using a previously validated, deep-learning method with optional manual correction. We extracted 148 initial EAT features (eg, morphologic, spatial, and HU), dubbed fat-omics, and used Cox elastic-net for feature reduction and prediction of MACE. Bootstrap validation gave CIs. Traditional EAT features gave marginal prediction (EAT-volume/EAT-mean-HU/BMI gave C-indices 0.53/0.55/0.57, respectively). Significant improvement was obtained with the 15-feature fat-omics model (C-index = 0.69, test set). High-risk features included the volume-of-voxels-having-elevated-HU-[-50,-30-HU] and HU-negative-skewness, both of which assess high HU values in EAT, a property implicated in fat inflammation. Other high-risk features include kurtosis-of-EAT-thickness, reflecting the heterogeneity of thicknesses, and EAT-volume-in-the-top-25%-of-the-heart, emphasizing adipose near the proximal coronary arteries. Kaplan-Meyer plots of Cox-identified, high- and low-risk patients were well separated with the median of the fat-omics risk, with the high-risk group having an HR 2.4 times that of the low-risk group (P < 0.001). Preliminary findings indicate an opportunity to use finely tuned, explainable assessments on EAT for improved cardiovascular risk prediction.

3 November 2022 in Bioengineering
Verified
Journal Article
Open access
PDF file
JLJuhwan Lee
Juhwan Lee
JKJustin Namuk Kim
Justin Namuk Kim
LGLia Gomez-Perez
Lia Gomez-Perez
YGYazan Gharaibeh
Yazan Gharaibeh
IMIssam Motairek
Issam Motairek
DWDavid Wilson
David Wilson
Microvessels in vascular plaque are associated with plaque progression and are found in plaque rupture and intra-plaque hemorrhage. To analyze this characteristic of vulnerability, we developed an automated deep learning method for detecting microvessels in intravascular optical coherence tomography (IVOCT) images. A total of 8403 IVOCT image frames from 85 lesions and 37 normal segments were analyzed. Manual annotation was performed using a dedicated software (OCTOPUS) previously developed by our group. Data augmentation in the polar (r,θ) domain was applied to raw IVOCT images to ensure that microvessels appear at all possible angles. Pre-processing methods included guidewire/shadow detection, lumen segmentation, pixel shifting, and noise reduction. DeepLab v3+ was used to segment microvessel candidates. A bounding box on each candidate was classified as either microvessel or non-microvessel using a shallow convolutional neural network. For better classification, we used data augmentation (i.e., angle rotation) on bounding boxes with a microvessel during network training. Data augmentation and pre-processing steps improved microvessel segmentation performance significantly, yielding a method with Dice of 0.71 ± 0.10 and pixel-wise sensitivity/specificity of 87.7 ± 6.6%/99.8 ± 0.1%. The network for classifying microvessels from candidates performed exceptionally well, with sensitivity of 99.5 ± 0.3%, specificity of 98.8 ± 1.0%, and accuracy of 99.1 ± 0.5%. The classification step eliminated the majority of residual false positives and the Dice coefficient increased from 0.71 to 0.73. In addition, our method produced 698 image frames with microvessels present, compared with 730 from manual analysis, representing a 4.4% difference. When compared with the manual method, the automated method improved microvessel continuity, implying improved segmentation performance. The method will be useful for research purposes as well as potential future treatment planning.

1 February 2023 in Heliyon
Verified
Journal Article
Open access
JLJuhwan Lee
Juhwan Lee
JKJustin Namuk Kim
Justin Namuk Kim
YGYazan Gharaibeh
Yazan Gharaibeh
VZVladislav N. Zimin
Vladislav N. Zimin
LDLuis A.P. Dallan
Luis A.P. Dallan
DWDavid Wilson
David Wilson
Compared with other imaging modalities, intravascular optical coherence tomography (IVOCT) has significant advantages for guiding percutaneous coronary interventions, assessing their outcomes, and characterizing plaque components. To aid IVOCT research studies, we developed the Optical Coherence TOmography PlaqUe and Stent (OCTOPUS) analysis software, which provides highly automated, comprehensive analysis of coronary plaques and stents in IVOCT images. User specifications for OCTOPUS were obtained from detailed, iterative discussions with IVOCT analysts in the Cardiovascular Imaging Core Laboratory at University Hospitals Cleveland Medical Center, a leading laboratory for IVOCT image analysis. To automate image analysis results, the software includes several important algorithmic steps: pre-processing, deep learning plaque segmentation, machine learning identification of stent struts, and registration of pullbacks for sequential comparisons. Intuitive, interactive visualization and manual editing of segmentations were included in the software. Quantifications include stent deployment characteristics (e.g., stent area and stent strut malapposition), strut level analysis, calcium angle, and calcium thickness measurements. Interactive visualizations include (x,y) anatomical, en face, and longitudinal views with optional overlays (e.g., segmented calcifications). To compare images over time, linked visualizations were enabled to display up to four registered vessel segments at a time. OCTOPUS has been deployed for nearly 1 year and is currently being used in multiple IVOCT studies. Underlying plaque segmentation algorithm yielded excellent pixel-wise results (86.2% sensitivity and 0.781 F1 score). Using OCTOPUS on 34 new pullbacks, we determined that following automated segmentation, only 13% and 23% of frames needed any manual touch up for detailed lumen and calcification labeling, respectively. Only up to 3.8% of plaque pixels were modified, leading to an average editing time of only 7.5 s/frame, an approximately 80% reduction compared to manual analysis. Regarding stent analysis, sensitivity and precision were both greater than 90%, and each strut was successfully classified as either covered or uncovered with high sensitivity (94%) and specificity (90%). We demonstrated use cases for sequential analysis. To analyze plaque progression, we loaded multiple pullbacks acquired at different points (e.g., pre-stent, 3-month follow-up, and 18-month follow-up) and evaluated frame-level development of in-stent neo-atherosclerosis. In ex vivo cadaver experiments, the OCTOPUS software enabled visualization and quantitative evaluation of irregular stent deployment in the presence of calcifications identified in pre-stent images. We introduced and evaluated the clinical application of a highly automated software package, OCTOPUS, for quantitative plaque and stent analysis in IVOCT images. The software is currently used as an offline tool for research purposes; however, the software's embedded algorithms may also be useful for real-time treatment planning.

19 August 2024 in Bioengineering
Verified
Journal Article
Open access
PDF file
JLJuhwan Lee
Juhwan Lee
YGYazan Gharaibeh
Yazan Gharaibeh
VZVladislav N. Zimin
Vladislav N. Zimin
JKJustin Namuk Kim
Justin Namuk Kim
NHNeda Shafiabadi Hassani
Neda Shafiabadi Hassani
DWDavid Wilson
David Wilson
This study aimed to investigate whether plaque characteristics derived from intravascular optical coherence tomography (IVOCT) could predict a long-term cardiovascular (CV) death. This study was a single-center, retrospective study on 104 patients who had undergone IVOCT-guided percutaneous coronary intervention. Plaque characterization was performed using Optical Coherence TOmography PlaqUe and Stent (OCTOPUS) software developed by our group. A total of 31 plaque features, including lesion length, lumen, calcium, fibrous cap (FC), and vulnerable plaque features (e.g., microchannel), were computed from the baseline IVOCT images. The discriminatory power for predicting CV death was determined using univariate/multivariate logistic regressions. Of 104 patients, CV death was identified in 24 patients (23.1%). Univariate logistic regression revealed that lesion length, calcium angle, calcium thickness, FC angle, FC area, and FC surface area were significantly associated with CV death (p < 0.05). In the multivariate logistic analysis, only the FC surface area (OR 2.38, CI 0.98–5.83, p < 0.05) was identified as a significant determinant for CV death, highlighting the importance of the 3D lesion analysis. The AUC of FC surface area for predicting CV death was 0.851 (95% CI 0.800–0.927, p < 0.05). Patients with CV death had distinct plaque characteristics (i.e., large FC surface area) in IVOCT. Studies such as this one might someday lead to recommendations for pharmaceutical and interventional approaches.