Annie Lumen

Dr. Annie Lumen


Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 May 2022 in Toxics
Verified
Journal Article
Open access
PDF file
XCXiaoqing Chang
Xiaoqing Chang
CTCecilia Tan
Cecilia Tan
DADavid G. Allen
David G. Allen
SBShannon Bell
Shannon Bell
PBPaul C. Brown
Paul C. Brown
M. Moiz MumtazM. Moiz Mumtaz
M. Moiz Mumtaz
During the past few decades, the science of toxicology has been undergoing a transformation from observational to predictive science. New approach methodologies (NAMs), including in vitro assays, in silico models, read-across, and in vitro to in vivo extrapolation (IVIVE), are being developed to reduce, refine, or replace whole animal testing, encouraging the judicious use of time and resources. Some of these methods have advanced past the exploratory research stage and are beginning to gain acceptance for the risk assessment of chemicals. A review of the recent literature reveals a burst of IVIVE publications over the past decade. In this review, we propose operational definitions for IVIVE, present literature examples for several common toxicity endpoints, and highlight their implications in decision-making processes across various federal agencies, as well as international organizations, including those in the European Union (EU). The current challenges and future needs are also summarized for IVIVE. In addition to refining and reducing the number of animals in traditional toxicity testing protocols and being used for prioritizing chemical testing, the goal to use IVIVE to facilitate the replacement of animal models can be achieved through their continued evolution and development, including a strategic plan to qualify IVIVE methods for regulatory acceptance.

9 May 2022 in Birth Defects Research
Verified
Journal Article
Open access
XCXiaoqing Chang
Xiaoqing Chang
JPJessica Palmer
Jessica Palmer
ALAnnie Lumen
Annie Lumen
ULUn Jung Lee
Un Jung Lee
PCPatricia Ceger
Patricia Ceger
NKNicole Kleinstreuer
Nicole Kleinstreuer
Background: The developmental toxicity potential (dTP) concentration from the devTOX quickPredict (devTOXqP) assay, a metabolomics‐based human induced pluripotent stem cell assay, predicts a chemical's developmental toxicity potency. Here, in vitro to in vivo extrapolation (IVIVE) approaches were applied to address whether the devTOXqP assay could quantitatively predict in vivo developmental toxicity lowest effect levels (LELs) for the prototypical teratogen valproic acid (VPA) and a group of structural analogues.Methods: VPA and a series of structural analogues were tested with the devTOXqP assay to determine dTP concentration and we estimated the equivalent administered doses (EADs) that would lead to plasma concentrations equivalent to the in vitro dTP concentrations. The EADs were compared to the LELs in rat developmental toxicity studies, human clinical doses, and EADs reported using other in vitro assays. To evaluate the impact of different pharmacokinetic (PK) models on IVIVE outcomes, we compared EADs predicted using various open‐source and commercially available PK and physiologically based PK (PBPK) models. To evaluate the effect of in vitro kinetics, an equilibrium distribution model was applied to translate dTP concentrations to free medium concentrations before subsequent IVIVE analyses.Results: The EAD estimates for the VPA analogues based on different PK/PBPK models were quantitatively similar to in vivo data from both rats and humans, where available, and the derived rank order of the chemicals was consistent with observed in vivo developmental toxicity. Different models were identified that provided accurate predictions for rat prenatal LELs and conservative estimates of human safe exposure. The impact of in vitro kinetics on EAD estimates is chemical‐dependent. EADs from this study were within range of predicted doses from other in vitro and model organism data.Conclusions: This study highlights the importance of pharmacokinetic considerations when using in vitro assays and demonstrates the utility of the devTOXqP human stem cell‐based platform to quantitatively assess a chemical's developmental toxicity potency.

28 January 2024 in Clinical Pharmacology & Therapeutics
Verified
Journal Article
Closed access
ALAnnie Lumen
Annie Lumen
XZXinwen Zhang
Xinwen Zhang
SDSandeep Dutta
Sandeep Dutta
VUVijay V. Upreti
Vijay V. Upreti


28 January 2023 in Toxics
Verified
Journal Article
Open access
PDF file
KFKiara Fairman
Kiara Fairman
MCMe-Kyoung Choi
Me-Kyoung Choi
PGPavani Gonnabathula
Pavani Gonnabathula
ALAnnie Lumen
Annie Lumen
AWAndrew Worth
Andrew Worth
MLMiao Li
Miao Li
A physiologically-based pharmacokinetic (PBPK) model represents the structural components of the body with physiologically relevant compartments connected via blood flow rates described by mathematical equations to determine drug disposition. PBPK models are used in the pharmaceutical sector for drug development, precision medicine, and the chemical industry to predict safe levels of exposure during the registration of chemical substances. However, one area of application where PBPK models have been scarcely used is forensic science. In this review, we give an overview of PBPK models successfully developed for several illicit drugs and environmental chemicals that could be applied for forensic interpretation, highlighting the gaps, uncertainties, and limitations.