Diffuse reflectance spectroscopy (DRS) is emerging as a rapid and cost-effective alternative to routine laboratory analysis for many soil properties. However, it has primarily been applied in project-specific contexts. Here, we provide an assessment of DRS spectroscopy at the scale of the continental United States by utilizing the large (n > 50,000) USDA National Soil Survey Center mid-infrared spectral library and associated soil characterization database. We tested and optimized several advanced statistical approaches for providing routine predictions of numerous soil properties relevant to studying carbon cycling. On independent validation sets, the machine learning algorithms Cubist and memory-based learner (MBL) both outperformed random forest (RF) and partial least squares regressions (PLSR) and produced excellent overall models with a mean R2 of 0.92 (mean ratio of performance to deviation = 6.5) across all 10 soil properties. We found that the use of root-mean-square error (RMSE) was misleading for understanding the actual uncertainty about any particular prediction; therefore, we developed routines to assess the prediction uncertainty for all models except Cubist. The MBL models produced much more precise predictions compared with global PLSR and RF. Finally, we present several techniques that can be used to flag predictions of new samples that may not be reliable because their spectra fall outside of the calibration set.
The soil health concept has evolved over the past several decades, recognizing that the response of dynamic soil properties to management is dependent on site‐specific factors. The Soil Health Assessment Protocol and Evaluation (SHAPE) tool provides scores and benchmark values by forming soil peer groups based on site‐specific, climate‐edaphic characteristics. Data for model development were compiled from the Cornell Soil Health Laboratory and the Kellogg Soil Survey Laboratory databases. The SHAPEv1.0 interpretation curves produce scores between 0% and 100% for measured laboratory values that reflect the quantile within a population conditional cumulative distribution function along with measures of uncertainty. The original SHAPE tool was developed for soil organic carbon and has been expanded to include two wet aggregate stability methods, permanganate oxidizable organic carbon, autoclaved citrate extractable protein, and 4‐day microbial respiration. In addition, SHAPE provides site‐specific benchmark values at user‐defined percentiles within a given soil peer group. The difference between the actual measured value and the selected benchmark value represents the soil health opportunity gap. Case studies in Missouri and Texas show that the SHAPE scoring curves are sensitive to land‐use and management practices across multiple soil types and provide a regionally relevant interpretation of key soil health indicators.
Understanding the influence of environmental factors on soil organic carbon (SOC) is critical for quantifying and reducing the uncertainty in carbon climate feedback projections under changing environmental conditions. We explored the effect of climatic variables, land cover types, topographic attributes, soil types and bedrock geology on SOC stocks of top 1 m depth across conterminous United States (US) ecoregions. Using 4559 soil profile observations and high-resolution data of environmental factors, we identified dominant environmental controllers of SOC stocks in 21 US ecoregions using geographically weighted regression. We used projected climatic data of SSP126 and SSP585 scenarios from GFDL-ESM 4 Earth System Model of Coupled Model Intercomparison Project phase 6 to predict SOC stock changes across continental US between 2030 and 2100. Both baseline and predicted changes in SOC stocks were compared with SOC stocks represented in GFDL-ESM4 projections. Among 56 environmental predictors, we found 12 as dominant controllers across all ecoregions. The adjusted geospatial model with the 12 environmental controllers showed an R2 of 0.48 in testing dataset. Higher precipitation and lower temperatures were associated with higher levels of SOC stocks in majority of ecoregions. Changes in land cover types (vegetation properties) was important in drier ecosystem as North American deserts, whereas soil types and topography were more important in American prairies. Wetlands of the Everglades was highly sensitive to projected temperature changes. The SOC stocks did not change under SSP126 until 2100, however SOC stocks decreased up to 21% under SSP585. Our results, based on environmental controllers of SOC stocks, help to predict impacts of changing environmental conditions on SOC stocks more reliably and may reduce uncertainties found in both, geospatial and Earth System Models. In addition, the description of different environmental controllers for US ecoregions can help to describe the scope and importance of global and local models.