Zachery D. Neil

Mr. Zachery D. Neil

School of Medicine, Mercer University, Savannah, Georgia, USA
orcid

Research Focus & Metrics

Academic Career Length

4Years (2023-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
15 October 2023 in Journal of Plastic, Reconstructive & Aesthetic Surgery
Verified
Journal Article
Closed access
NPNoah Pierzchajlo
Noah Pierzchajlo
MZMeira Zibitt
Meira Zibitt
CHChandler Hinson
Chandler Hinson
JSJ. Avery Stokes
J. Avery Stokes
Zachery D. NeilZachery D. Neil
Zachery D. Neil
PBPatrick J. Buchanan
Patrick J. Buchanan

21 January 2023 in Metabolites
Verified
Journal Article
Open access
PDF file
Zachery D. NeilZachery D. Neil
Zachery D. Neil
NPNoah Pierzchajlo
Noah Pierzchajlo
CBCandler Keith Boyett
Candler Keith Boyett
OLOlivia Little
Olivia Little
CKCathleen Kuo
Cathleen Kuo
Julian Lassiter GendreauJulian Lassiter Gendreau
Julian Lassiter Gendreau
Glioblastoma (GBM) is a common and deadly brain tumor with late diagnoses and poor prognoses. Machine learning (ML) is an emerging tool that can create highly accurate diagnostic and prognostic prediction models. This paper aimed to systematically search the literature on ML for GBM metabolism and assess recent advancements. A literature search was performed using predetermined search terms. Articles describing the use of an ML algorithm for GBM metabolism were included. Ten studies met the inclusion criteria for analysis: diagnostic (n = 3, 30%), prognostic (n = 6, 60%), or both (n = 1, 10%). Most studies analyzed data from multiple databases, while 50% (n = 5) included additional original samples. At least 2536 data samples were run through an ML algorithm. Twenty-seven ML algorithms were recorded with a mean of 2.8 algorithms per study. Algorithms were supervised (n = 24, 89%), unsupervised (n = 3, 11%), continuous (n = 19, 70%), or categorical (n = 8, 30%). The mean reported accuracy and AUC of ROC were 95.63% and 0.779, respectively. One hundred six metabolic markers were identified, but only EMP3 was reported in multiple studies. Many studies have identified potential biomarkers for GBM diagnosis and prognostication. These algorithms show promise; however, a consensus on even a handful of biomarkers has not yet been made.

9 October 2023 in Journal of Clinical Neuroscience
Verified
Journal Article
Closed access
YMYusuf Mehkri
Yusuf Mehkri
NPNoah Pierzchajlo
Noah Pierzchajlo
CKCatherine Kemeness
Catherine Kemeness
GHGrace Elaine Hey
Grace Elaine Hey
RSRamy Sharaf
Ramy Sharaf
Brandon Lucke-WoldBrandon Lucke-Wold
Brandon Lucke-Wold

27 January 2023 in Current Oncology
Verified
Journal Article
Open access
PDF file
WYWilliam H. Yang
William H. Yang
AGAndrew P. George
Andrew P. George
CWChiung-Min Wang
Chiung-Min Wang
RYRichard H. Yang
Richard H. Yang
ADAvery M. Duncan
Avery M. Duncan
WYWei-Hsiung Yang
Wei-Hsiung Yang
The programmed cell death protein 4 (PDCD4), a well-known tumor suppressor, inhibits translation initiation and cap-dependent translation by inhibiting the helicase activity of EIF4A. The EIF4A tends to target mRNAs with a structured 5′-UTR. In addition, PDCD4 can also prevent tumorigenesis by inhibiting tumor promoter-induced neoplastic transformation, and studies indicate that PDCD4 binding to certain mRNAs inhibits those mRNAs’ translation. A previous study demonstrated that PDCD4 inhibits the translation of p53 mRNA and that treatment with DNA-damaging agents down-regulates PDCD4 expression but activates p53 expression. The study further demonstrated that treatment with DNA-damaging agents resulted in the downregulation of PDCD4 expression and an increase in p53 expression, suggesting a potential mechanism by which p53 regulates the expression of PDCD4. However, whether p53 directly regulates PDCD4 remains unknown. Herein, we demonstrate for the first time that p53 regulates PDCD4 expression. Firstly, we found that overexpression of p53 in p53-null cells (H1299 and Saos2 cells) decreased the PDCD4 protein level. Secondly, p53 decreased PDCD4 promoter activity in gene reporter assays. Moreover, we demonstrated that mutations in p53 (R273H: contact hotspot mutation, and R175H: conformational hotspot mutation) abolished p53-mediated PDCD4 repression. Furthermore, mutations in the DNA-binding domain, but not in the C-terminal regulatory domain, of p53 disrupted p53-mediated PDCD4 repression. Finally, the C-terminal regulatory domain truncation study showed that the region between aa374 and aa370 is critical for p53-mediated PDCD4 repression. Taken together, our results suggest that p53 functions as a novel regulator of PDCD4, and the relationship between p53 and PDCD4 may be involved in tumor development and progression.