Background: Subunit vaccines based on recombinant proteins have been effective in preventing infectious diseases and are expected to meet the demands of future vaccine development. Computational approach, especially reverse vaccinology (RV) method has enormous potential for identification of protein vaccine candidates (PVCs) from a proteome. The existing protective antigen prediction software and web servers have low prediction accuracy leading to limited applications for vaccine development. Besides machine learning techniques, those software and web servers have considered only protein’s adhesin-likeliness as criterion for identification of PVCs. Several non-adhesin functional classes of proteins involved in host-pathogen interactions and pathogenesis are known to provide protection against bacterial infections. Therefore, knowledge of bacterial pathogenesis has potential to identify PVCs. Results: A web server, Jenner-Predict, has been developed for prediction of PVCs from proteomes of bacterial pathogens. The web server targets host-pathogen interactions and pathogenesis by considering known functional domains from protein classes such as adhesin, virulence, invasin, porin, flagellin, colonization, toxin, choline-binding, penicillin-binding, transferring-binding, fibronectin-binding and solute-binding. It predicts non-cytosolic proteins containing above domains as PVCs. It also provides vaccine potential of PVCs in terms of their possible immunogenicity by comparing with experimentally known IEDB epitopes, absence of autoimmunity and conservation in different strains. Predicted PVCs are prioritized so that only few prospective PVCs could be validated experimentally. The performance of web server was evaluated against known protective antigens from diverse classes of bacteria reported in Protegen database and datasets used for VaxiJen server development. The web server efficiently predicted known vaccine candidates reported from Streptococcus pneumoniae and Escherichia coli proteomes. The Jenner-Predict server outperformed NERVE, Vaxign and VaxiJen methods. It has sensitivity of 0.774 and 0.711 for Protegen and VaxiJen dataset, respectively while specificity of 0.940 has been obtained for the latter dataset. Conclusions: Better prediction accuracy of Jenner-Predict web server signifies that domains involved in host-pathogen interactions and pathogenesis are better criteria for prediction of PVCs. The web server has successfully predicted maximum known PVCs belonging to different functional classes. Jenner-Predict server is freely accessible at http://117.211.115.67/vaccine/home.html

The ripeness of bananas is the most significant factor affecting nutrient composition and demand. Conventionally, cutting and ripeness analysis requires expert knowledge and substantial human intervention, and different studies have been conducted to automate and substantially reduce human effort. Using the Preferred Reporting Items for the Systematic Reviews approach, 1548 studies were extracted from journals and conferences, using different research databases, and 35 were included in the final review for key parameters. These studies suggest the dominance of banana fingers as input data, a sensor camera as the preferred capturing device, and appropriate features, such as color, that can provide better detection. Among six stages of ripeness, the studies employing the four mentioned stages performed better in terms of accuracy and coefficient of determination value. Among all the works for detecting ripeness stages prediction, convolutional neural networks were found to perform sufficiently well with large datasets, whereas conventional artificial neural networks and support vector machines attained better performance for sensor-related data. However, insufficient information on the dataset and capturing device, limited data availability, and exploitation of data augmentation techniques are limitations in existing studies. Thus, effectively addressing these shortcomings and close collaboration with experts to predict the ripeness stages should be pursued.

Consumer-level cameras have provided an advantage of designing cost-effective, non-contact physiological parameters estimation approaches which is not possible with gold standard estimation techniques. This encourages the development of non-contact estimation methods using camera technology. Therefore, this work aims to present a systematic review summarizing the currently existing face-based non-contact methods along with their performance. This review includes all heart rate (HR) and oxygen saturation (SpO2) studies published in journals and a few reputed conferences, which have compared the proposed estimation methods with one or more standard reference devices. The articles were collected from the following research databases: Institute of Electrical and Electronics Engineers (IEEE), PubMed, Web of Science (WoS), Science Direct, and Association of Computer Machinery (ACM) digital library. All database searches were completed on May 20, 2021. Each study was assessed using a finite set of identified factors for reporting bias. Out of 332 identified studies, 32 studies were selected for the final review. Additionally, 18 studies were included by thoroughly checking these studies. 3 out of 50 (6%) studies were performed in clinical conditions, while the remaining studies were carried out on a healthy population. 42 out of 50 (84%) studies have estimated HR, while 5/50 (10%) studies have measured SpO₂ only. The remaining three studies have estimated both parameters. The majority of the studies have used 1-3 min videos for estimation. Among the estimation methods, Deep Learning and Independent component analysis (ICA) were used by 11/42 (26.19%) and 9/42 (21.42%) studies, respectively. According to the Bland-Altman analysis, only 8/45 (17.77%) HR studies achieved the clinically accepted error limits whereas, for SpO₂, 4/5 (80%) studies have matched the industry standards (±3%). Deep Learning and ICA have been predominantly used for HR estimations. Among deep learning estimation methods, convolutional neural networks have been employed till date due to their good generalization ability. Most non-contact HR estimation methods need significant improvements to implement these methods in a clinical environment. Furthermore, these methods need to be tested on the subjects suffering from any related disease. SpO₂ estimation studies are challenging and need to be tested by conducting hypoxemic events. The authors would encourage reporting the detailed information about the study population, the use of longer videos, and appropriate performance metrics and testing under abnormal HR and SpO₂ ranges for future estimation studies.

Heart Rate (HR) estimation is of utmost importance due to its applicability in diverse fields. Conventional methods for HR estimation require skin contact and are not suitable in certain scenarios such as sensitive skin or prolonged unobtrusive HR monitoring. Therefore remote photoplethysmography (rPPG) methods have become an active area of research. These methods utilize the facial videos acquired using a camera followed by extracting the Blood Volume Pulse (BVP) signal for heart rate calculation. The existing rPPG methods either utilized a single color channel or weighted color differences, which has certain limitations dealing with motion and illumination artifacts. This study considered BVP extraction as an undercomplete problem and proposed a method resistant to motion and illumination variation artifacts. This method is based on an undercomplete independent component analysis, aiming to estimate the unmixing matrix using a non-linear Cumulative Density Function (CDF) that has been optimized using the customized Levenberg-Marquardt algorithm. Therefore, the method is named U-LMA. The proposed method was tested under three scenarios: constrained, motion, and illumination variations scenarios. High Pearson correlation coefficient values and smaller lower-upper statistical limits of Bland-Altman plots justified the outstanding performance of the proposed U-LMA. Furthermore, its comparative analysis with the state-of-the-art methods demonstrated its efficacy and reliability, which was proven by the lowest error and highest correlation values (0.01 significance level). Additionally, higher accuracy satisfying the clinically accepted error differences also justified its clinical relevance.