Emily Gallichotte

Dr. Emily Gallichotte


Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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30 April 2025 in PLOS Neglected Tropical Diseases
Verified
Journal Article
Open access
PDF file
EGEmily Gallichotte
Emily Gallichotte
GEGregory D. Ebel
Gregory D. Ebel
CCColin Carlson
Colin Carlson
The 2023–24 epidemic of Oropouche fever in the Americas and the associated ongoing outbreak in Cuba suggests a potential state shift in the epidemiology of the disease, raising questions about which vectors are driving transmission. In this study, we conduct a systematic review of vector competence experiments with Oropouche virus (OROV, Orthobunyavirus) that were published prior to the 2023–24 epidemic season. Only seven studies were published by September 2024, highlighting the chronic neglect that Oropouche virus (like many other orthobunyaviruses) has been subjected to since its discovery in 1954. Two species of midge (Culicoides paraensis and C. sonorensis) consistently demonstrate a high competence to transmit OROV (~30%), while mosquitoes (including both Aedes and Culex spp.) exhibited an infection rate consistently below ~20%, and showed limited OROV transmission. Further research is needed to establish which vectors are involved in the ongoing outbreak in Cuba, and whether local vectors and wildlife communities create any risk of establishment in non-endemic regions.

9 June 2020 in medRxiv
Verified
Preprint
Open access
PDF file
KQKendra Quicke
Kendra Quicke
EGEmily Gallichotte
Emily Gallichotte
NSNicole Sexton
Nicole Sexton
MYMichael Young
Michael Young
AJAshley Janich
Ashley Janich
GEGreg Ebel
Greg Ebel
SARS-CoV-2 emerged in 2019 and has become a major global pathogen in an astonishingly short period of time. The emergence of SARS-CoV-2 also has been notable due to its impacts on individuals residing within skilled nursing facilities (SNFs) such as rehabilitation centers and nursing homes. SNF residents tend to possess several risk factors for the most severe outcomes of SARS-CoV-2 infection, including advanced age and the presence of multiple comorbidities. Indeed, residents of long-term care facilities represent approximately 40 percent of US SARS-CoV-2 deaths. To assess the prevalence and incidence of SARS-CoV-2 among SNF workers, determine the extent of asymptomatic infection by SARS-CoV-2, and provide information on the genomic epidemiology of the virus within these unique care settings, we sampled workers weekly at five SNFs in Colorado using nasopharyngeal swabs, determined the presence of viral RNA and infectious virus among these workers, and sequenced 48 nearly complete genomes. This manuscript reports results from the first five to six weeks of observation. Our data reveal a strikingly high degree of asymptomatic infection, a strong correlation between RNA detection and the presence of infectious virus in NP swabs, persistent RNA in a subset of individuals, and declining incidence over time. Our data suggests that asymptomatic individuals infected by SARS-CoV-2 may contribute to virus transmission within the workplace.

3 May 2023 in The American Journal of Tropical Medicine and Hygiene
Verified
Journal Article
Open access
PDF file
BCBinqi Chen
Binqi Chen
ASAmy R. Sweeny
Amy R. Sweeny
VWVelen Y. Wu
Velen Y. Wu
RCRebecca Christofferson
Rebecca Christofferson
GEGregory Ebel
Gregory Ebel
CCColin Carlson
Colin Carlson
: Arboviruses receive heightened research attention during major outbreaks or when they cause unusual or severe clinical disease, but they are otherwise undercharacterized. Global change is also accelerating the emergence and spread of arboviral diseases, leading to time-sensitive questions about potential interactions between viruses and novel vectors. Vector competence experiments help determine the susceptibility of certain arthropods to a given arbovirus, but these experiments are often conducted in real time during outbreaks, rather than with preparedness in mind. We conducted a systematic review of reported mosquito–arbovirus competence experiments, screening 570 abstracts to arrive at 265 studies testing in vivo arboviral competence. We found that more than 90% of potential mosquito–virus combinations are untested in experimental settings and that entire regions and their corresponding vectors and viruses are undersampled. These knowledge gaps stymie outbreak response and limit attempts to both build and validate predictive models of the vector–virus network.

22 December 2021 in Microbiology Spectrum
Verified
Journal Article
Open access
EGEmily Gallichotte
Emily Gallichotte
KQKendra M. Quicke
Kendra M. Quicke
NSNicole R. Sexton
Nicole R. Sexton
EFEmily Fitzmeyer
Emily Fitzmeyer
MYMichael C. Young
Michael C. Young
NENicole Ehrhart
Nicole Ehrhart
Our work comprises unique data on the characteristics of SARS-CoV-2 dynamics among staff working at LTCFs in the early months of the SARS-CoV-2 pandemic prior to mandated staff surveillance testing. During this time period, LTCF residents were largely sheltering-in-place.

7 December 2024 in Biosensors and Bioelectronics
Verified
Journal Article
Closed access
NFNutnaree Fukana
Nutnaree Fukana
JPJoowon Park
Joowon Park
GJGilberto J. Silva Junior
Gilberto J. Silva Junior
LMLauren E. Malsick
Lauren E. Malsick
EGEmily Gallichotte
Emily Gallichotte
CHCharles S. Henry
Charles S. Henry

28 July 2022 in American Journal of Infection Control
Verified
Journal Article
Closed access
EGEmily Gallichotte
Emily Gallichotte
WWWilliam Windsor
William Windsor
SWStuart Watts
Stuart Watts
NSNicole R. Sexton
Nicole R. Sexton
CHChuck Henry
Chuck Henry
GEGregory D. Ebel
Gregory D. Ebel