Yan Zhang

Dr. Yan Zhang


Research Focus & Metrics

Academic Career Length

4Years (2023-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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15 December 2023 in Frontiers in Computational Neuroscience
Verified
Journal Article
Open access
ASAbu Bakr Siddique
Abu Bakr Siddique
YZYan Zhang
Yan Zhang
HAHongyu An
Hongyu An
Introduction: Parkinson’s disease (PD) is a neurodegenerative disorder affecting millions of patients. Closed-Loop Deep Brain Stimulation (CL-DBS) is a therapy that can alleviate the symptoms of PD. The CL-DBS system consists of an electrode sending electrical stimulation signals to a specific region of the brain and a battery-powered stimulator implanted in the chest. The electrical stimuli in CL-DBS systems need to be adjusted in real-time in accordance with the state of PD symptoms. Therefore, fast and precise monitoring of PD symptoms is a critical function for CL-DBS systems. However, the current CL-DBS techniques suffer from high computational demands for real-time PD symptom monitoring, which are not feasible for implanted and wearable medical devices.Methods: In this paper, we present an energy-efficient neuromorphic PD symptom detector using memristive three-dimensional integrated circuits (3D-ICs). The excessive oscillation at beta frequencies (13–35 Hz) at the subthalamic nucleus (STN) is used as a biomarker of PD symptoms.Results: Simulation results demonstrate that our neuromorphic PD detector, implemented with an 8-layer spiking Long Short-Term Memory (S-LSTM), excels in recognizing PD symptoms, achieving a training accuracy of 99.74% and a validation accuracy of 99.52% for a 75%–25% data split. Furthermore, we evaluated the improvement of our neuromorphic CL-DBS detector using NeuroSIM. The chip area, latency, energy, and power consumption of our CL-DBS detector were reduced by 47.4%, 66.63%, 65.6%, and 67.5%, respectively, for monolithic 3D-ICs. Similarly, for heterogeneous 3D-ICs, employing memristive synapses to replace traditional Static Random Access Memory (SRAM) resulted in reductions of 44.8%, 64.75%, 65.28%, and 67.7% in chip area, latency, and power usage.Discussion: This study introduces a novel approach for PD symptom evaluation by directly utilizing spiking signals from neural activities in the time domain. This method significantly reduces the time and energy required for signal conversion compared to traditional frequency domain approaches. The study pioneers the use of neuromorphic computing and memristors in designing CL-DBS systems, surpassing SRAM-based designs in chip design area, latency, and energy efficiency. Lastly, the proposed neuromorphic PD detector demonstrates high resilience to timing variations in brain neural signals, as confirmed by robustness analysis.

7 April 2025 in ACS Applied Bio Materials
Verified
Journal Article
Closed access
DADilka Liyana Arachchige
Dilka Liyana Arachchige
SDSushil K. Dwivedi
Sushil K. Dwivedi
PAPeter Agyemang
Peter Agyemang
HLHenry Lanquaye
Henry Lanquaye
JPJoseph Peters
Joseph Peters
HLHaiying Liu
Haiying Liu

26 May 2025 in Sensors and Actuators B: Chemical
Verified
Journal Article
Closed access
SDSushil K. Dwivedi
Sushil K. Dwivedi
HLHenry Lanquaye
Henry Lanquaye
MWMay Waters
May Waters
AAAdonis Amoli
Adonis Amoli
CWCrystal Wang
Crystal Wang
HLHaiying Liu
Haiying Liu

16 March 2025 in Cellular Signalling
Verified
Journal Article
Open access
YZYang Zhang
Yang Zhang
MPMatthew Plansinis
Matthew Plansinis
SPSophia Peak
Sophia Peak
EWElisabeth Weber
Elisabeth Weber
AWAiping Wei
Aiping Wei
YZYan Zhang
Yan Zhang
Autosomal dominant polycystic kidney disease (ADPKD) is characterized by the progressive enlargement of fluid-filled cysts, leading to a decline in renal function. Toll-like receptors (TLR)-2 and TLR4 are pattern recognition receptors and components of the innate immune response. We found that mRNA levels for TLR2 and TLR4, an adaptor protein MyD88, and the transcription factor NF-κB were elevated in the kidneys of ADPKD patients and PKD mice. There was decreased expression of IκBα, an inhibitory protein sequestering NF-κB in the cytosol, and increased NF-κB nuclear translocation in human ADPKD kidneys compared with normal human kidneys (NHK). Pam3CSK4, a synthetic TLR2 agonist, increased the phosphorylation of IκBα, decreased its total levels, and caused NF-κB nuclear translocation and upregulation of pro-inflammatory mediators in cultured human ADPKD cells. Pam3CSK4 also increased phosphorylated ERK, a mitogen-activated protein kinase, and phosphorylated S6, a downstream target of the mTOR pathway, and accelerated ADPKD cell proliferation. By contrast, Pam3CSK4 did not affect NF-κB or ERK in NHK cells, but rather induced cytotoxicity, suggesting that TLR2 activation's effect was specific to ADPKD cells. Treatment with a TLR4 agonist did not affect NF-κB or ERK signaling in either ADPKD or NHK cells. Inhibition of TGF-β-activated kinase-1 (TAK1) effectively suppressed Pam3CSK4-induced NF-κB and ERK activation and the proliferation of ADPKD cells. These findings suggest that activation of TLR2 increases NF-κB-mediated-inflammatory mediators and ERK-dependent cell proliferation through TAK1 in ADPKD cells. We propose that the TLR2/TAK1 axis is a potential therapeutic target to reduce inflammation and cyst growth in ADPKD.

15 September 2025 in Journal of Materials Chemistry B
Verified
Journal Article
Closed access
PDF file
SDSushil Kumar Dwivedi
Sushil Kumar Dwivedi
AAAdonis Amoli
Adonis Amoli
MNMahmood Norouzi
Mahmood Norouzi
AGAlicia Guo
Alicia Guo
HLHenry Lanquaye
Henry Lanquaye
HLHaiying Liu
Haiying Liu
We introduce a ratiometric sensor designed for sensitive and specific detection of NAD(P)H in living cells, tissues, and whole organisms.