Pavel Hanáček

Prof. Pavel Hanáček

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Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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21 February 2020 in Forests
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Petr MaděraPetr Maděra
Petr Maděra
AFAlan Forrest
Alan Forrest
PHPavel Hanáček
Pavel Hanáček
PVPetr Vahalík
Petr Vahalík
Roman GebauerRoman Gebauer
Roman Gebauer
HHHana Habrová
Hana Habrová
This article is a broad review focused on dragon trees—one of the most famous groups of trees in the world, well known from ancient times. These tertiary relicts are severely endangered in most of the area where they grow. The characteristic features of the dragon tree group are described and the species belonging to this group are listed. This review gathers together current knowledge regarding the taxonomy, evolution, anatomy and morphology, physiology, and ontogeny of arborescent dragon tree species. Attention is also paid to the composition, harvesting, medicinal, and ethnobotanical use of the resin (dragons’ blood). An evaluation of population structure, distribution, ecology, threats, and nature conservation forms the final part of the review. In the conclusions we recommend further avenues of research that will be needed to effectively protect all dragon tree species.

28 June 2019 in Sustainability
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Petr MaděraPetr Maděra
Petr Maděra
DVDaniel Volařík
Daniel Volařík
ZPZdeněk Patočka
Zdeněk Patočka
HKHana Kalivodová
Hana Kalivodová
JDJosef Divín
Josef Divín
PVPetr Vahalík
Petr Vahalík
Unsustainable overgrazing is one of the most important threats to the endemic and endangered population of dragon’s blood tree (Dracaena cinnabari) on Socotra Island (Republic of Yemen). However, there is a lack of information about the exact population size and its conservation status. We estimated the population size of D. cinnabari using remote sensing data. The age structure was inferred using a relationship between crown projection area and the number of branch sections. The conservation importance of each sub-population was assessed using a specially developed index. Finally, the future population development (extinction time) was predicted using population matrices. The total population size estimated consists of 80,134 individuals with sub-populations varying from 14 to 32,196 individuals, with an extinction time ranging from 31 to 564 years. Community forestry controlled by a local certification system is suggested as a sustainable land management approach providing traditional and new benefits and enabling the reforestation of endemic tree species on Socotra Island.

7 March 2014 in PLOS ONE
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EKEva Konečná
Eva Konečná
DŠDana Šafářová
Dana Šafářová
MNMilan Navrátil
Milan Navrátil
PHPavel Hanáček
Pavel Hanáček
CCClarice Coyne
Clarice Coyne
Petr SmykalPetr Smykal
Petr Smykal
The eukaryotic translation initiation factor 4E was shown to be involved in resistance against several potyviruses in plants, including pea. We combined our knowledge of pea germplasm diversity with that of the eIF4E gene to identify novel genetic diversity. Germplasm of 2803 pea accessions was screened for eIF4E intron 3 length polymorphism, resulting in the detection of four eIF4EA-B-C-S variants, whose distribution was geographically structured. The eIF4EA variant conferring resistance to the P1 PSbMV pathotype was found in 53 accessions (1.9%), of which 15 were landraces from India, Afghanistan, Nepal, and 7 were from Ethiopia. A newly discovered variant, eIF4EB, was present in 328 accessions (11.7%) from Ethiopia (29%), Afghanistan (23%), India (20%), Israel (25%) and China (39%). The eIF4EC variant was detected in 91 accessions (3.2% of total) from India (20%), Afghanistan (33%), the Iberian Peninsula (22%) and the Balkans (9.3%). The eIF4ES variant for susceptibility predominated as the wild type. Sequencing of 73 samples, identified 34 alleles at the whole gene, 26 at cDNA and 19 protein variants, respectively. Fifteen alleles were virologically tested and 9 alleles (eIF4EA-1-2-3-4-5-6-7, eIF4EB-1, eIF4EC-2) conferred resistance to the P1 PSbMV pathotype. This work identified novel eIF4E alleles within geographically structured pea germplasm and indicated their independent evolution from the susceptible eIF4ES1 allele. Despite high variation present in wild Pisum accessions, none of them possessed resistance alleles, supporting a hypothesis of distinct mode of evolution of resistance in wild as opposed to crop species. The Highlands of Central Asia, the northern regions of the Indian subcontinent, Eastern Africa and China were identified as important centers of pea diversity that correspond with the diversity of the pathogen. The series of alleles identified in this study provides the basis to study the co-evolution of potyviruses and the pea host.

19 July 2023 in Plants
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VSVeronika Sedláková
Veronika Sedláková
SZSanja Cavar Zeljkovic
Sanja Cavar Zeljkovic
NSNikola Stefelova
Nikola Stefelova
Petr SmykalPetr Smykal
Petr Smykal
PHPavel Hanáček
Pavel Hanáček
The physical dormancy of seeds is likely to be mediated by the chemical composition and the thickness of the seed coat. Here, we investigate the link between the content of phenylpropanoids (i.e., phenolics and flavonoids) present in the chickpea seed coat and dormancy. The relationship between selected phenolic and flavonoid metabolites of chickpea seed coats and dormancy level was assessed using wild and cultivated chickpea parental genotypes and a derived population of recombinant inbred lines (RILs). The selected phenolic and flavonoid metabolites were analyzed via the LC-MS/MS method. Significant differences in the concentration of certain phenolic acids were found among cultivated (Cicer arietinum, ICC4958) and wild chickpea (Cicer reticulatum, PI489777) parental genotypes. These differences were observed in the contents of gallic, caffeic, vanillic, syringic, p-coumaric, salicylic, and sinapic acids, as well as salicylic acid-2-O-β-d-glucoside and coniferaldehyde. Additionally, significant differences were observed in the flavonoids myricetin, quercetin, luteolin, naringenin, kaempferol, isoorientin, orientin, and isovitexin. When comparing non-dormant and dormant RILs, significant differences were observed in gallic, 3-hydroxybenzoic, syringic, and sinapic acids, as well as the flavonoids quercitrin, quercetin, naringenin, kaempferol, and morin. Phenolic acids were generally more highly concentrated in the wild parental genotype and dormant RILs. We compared the phenylpropanoid content of chickpea seed coats with related legumes, such as pea, lentil, and faba bean. This information could be useful in chickpea breeding programs to reduce dormancy.

12 November 2021 in Agronomy
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VSVeronika Sedláková
Veronika Sedláková
PHPavel Hanáček
Pavel Hanáček
MGMarie Grulichová
Marie Grulichová
LZLenka Zablatzká
Lenka Zablatzká
Petr SmykalPetr Smykal
Petr Smykal
Legume seed dormancy has been altered during the domestication process, resulting in non-dormant seeds with a testa that is readily permeable for water. Ultimately, this provides fast and uniform germination, in contrast to dormant seeds of the wild progenitor. To date, germination and seed dormancy were studied mostly in relation to two types of cultivated chickpea: kabuli and desi. We studied seed dormancy, from physiological and anatomical perspectives, in chickpea crops and compared cultivated chickpeas to the wild chickpea progenitor and set of recombinant inbred lines (RIL). There was significant difference in the macrosclereid length of parental genotypes. Cultivated chickpea (C. arietinum, ICC4958) had mean of 125 µm, while wild C. reticulatum (PI48977) had a mean of 165 µm. Histochemical staining of the seed coat also showed differences, mainly in terms of Sudan Red detection of lipidic substances. Imbibition and germination were tested and several germination coefficients were calculated. Cultivated chickpea seeds imbibed readily within 24 h, while the germination percentage of wild chickpea at various times was 36% (24 h), 46% (48 h), 60% (72 h) and reached 100% only after 20 days. RIL lines showed a broader distribution. This knowledge will ultimately lead to the identification of the underlying molecular mechanism of seed dormancy in chickpea, as well as allowing comparison to phylogenetically related legumes, such as pea, lentil and faba bean, and could be utilized in chickpea breeding programs.

Verified
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ENEliška Nováková
Eliška Nováková
LZLenka Zablatzká
Lenka Zablatzká
JBJan Brus
Jan Brus
VNViktorie Nesrstová
Viktorie Nesrstová
PHPavel Hanáček
Pavel Hanáček
Petr SmykalPetr Smykal
Petr Smykal
Reproductive isolation is an important component of species differentiation. The plastid accD gene coding for the acetyl-CoA carboxylase subunit and the nuclear bccp gene coding for the biotin carboxyl carrier protein were identified as candidate genes governing nuclear-cytoplasmic incompatibility in peas. We examined the allelic diversity in a set of 195 geographically diverse samples of both cultivated (Pisum sativum, P. abyssinicum) and wild (P. fulvum and P. elatius) peas. Based on deduced protein sequences, we identified 34 accD and 31 bccp alleles that are partially geographically and genetically structured. The accD is highly variable due to insertions of tandem repeats. P. fulvum and P. abyssinicum have unique alleles and combinations of both genes. On the other hand, partial overlap was observed between P. sativum and P. elatius. Mapping of protein sequence polymorphisms to 3D structures revealed that most of the repeat and indel polymorphisms map to sequence regions that could not be modeled, consistent with this part of the protein being less constrained by requirements for precise folding than the enzymatically active domains. The results of this study are important not only from an evolutionary point of view but are also relevant for pea breeding when using more distant wild relatives.