Herein, we isolated the pathogenic strain ZZ051 from hemorrhagic channel catfish (Ictalurus punctatus). Physiological and biochemical identification, 16S rRNA gene sequence analysis, and MALDI-TOF-MS showed that the ZZ051 strain was Aeromonas veronii. After artificial infection, the diseased fish showed symptoms similar to the natural disease, and the characteristics of the bacteria reisolated from the tissues were the same as those of the original infection, indicating that the isolated strain ZZ051 was the pathogen responsible for the channel catfish disease. The ZZ051 isolate was highly sensitive to enrofloxacin but resistant to florfenicol. This study provided a theoretical basis for preventing and controlling hemorrhagic disease in channel catfish.

Interactions between host and pathogen are involving various dynamic changes in transcript expression and critical for understanding host immunity against infections and its associated pathogenesis. Herein, we established a model of channel catfish infected with Aeromonas veronii. The infected fish had prominent body surface bleeding, and the spleen showed hyperemia and swelling. Then, the spleen of channel catfish infected with A. veronii was analyzed by dual RNA sequencing (RNA-seq), and the transcriptome data were compared with uninfected channel catfish spleen or bacteria cultured in vitro. The transcript expression profile of pathogen-host interaction between A. veronii and channel catfish was successfully studied. During infection, the host was enriched for multiple immune-related signaling pathways, such as the Toll-like receptor signaling pathway, Cytokine-cytokine receptor interaction, and T cell receptor signaling pathway; and significantly upregulated for many innate immune-related genes, including IL-8. At the same time, we found that A. veronii mainly harmed the host spleen through hemolysin. Our current findings are of great significance in clarifying the pathogenesis of channel catfish induced by A. veronii and provide gene targets for developing preventive measures.

Due to a sharp decline in resources, Schizothorax waltoni Regan and Percocypris retrodorslis have been listed as wildlife under second-class protection in China. Under culture conditions, the early development and allometric growth patterns of S. waltoni and P. retrodorslis were researched from the hatching stage to 60 DPHs (days post-hatching), and a sampling of ten to fifteen larvae was made every day, followed by measurements with Axio Vision 4.8 software (Carl Zeiss AG, Jena, Germany). Morphological indicators included the anal fin length, the body depth, the body depth at the anus level, the caudal fin length, the dorsal fin length, the eye diameter, the head length, the head depth, the pectoral fin length, the tail length, the trunk length, the snout length, the total length, and the ventral fin length. Based on the morphology development of S. waltoni Regan and P. retrodorslis, four periods of larval growth were identified: pre-flexion larvae at 0–14 DPHs and 0–16 DPHs; flexion larvae at 14–23 DPHs and 16–26 DPHs, post-flexion larvae at 23–50 DPHs and 26–52 DPHs, and the juvenile stage. In newly hatched larvae, most organs and body parts were not differentiated, and they successively developed within 26 DPHs. The depletion of the yolk sac was observed at 23 DPHs and 25 DPHs. Allometric growth mainly occurs in the head and tail regions, indicating that body parts related to feeding and swimming behaviors were more important than the other parts. In addition, the growth pattern shows that the development of organs gives priority to the functions of gill respiration, sensation, exogenous feeding, and swimming. The inflection points of body part growth patterns only appeared before 40 DAH, so future studies should concentrate focus on developing the best feeding from the first feeding to 40 DAH. These outcomes were discussed with regard to the ontogeny of the functional morphology in relation to ecology and aquaculture. It is expected that this research can provide valuable perspectives in species conservation.

Elizabethkingia miricola (E. miricola) is a significant pathogen that causes the crooked head disease in black spotted frogs. This disease has plagued numerous frog farms in China and has resulted in substantial losses to the frog farming industry. Nonetheless, the exact mechanism that causes the disease in frogs remains unknown. In this study, transcriptomic and microbiomic analyses were conducted to analyze frog samples infected with E. miricola to reveal the infection mechanism of the pathogen. Liver transcriptomic analysis indicated that the livers of infected frogs had 1469 differentially expressed genes when compared with an uninfected group. These DEGs are mainly involved in immunity and metabolism, including neutrophil extracellular trap formation, the NOD-like receptor signaling pathway, leukocyte transendothelial migration, chemokine signaling pathway, Fc gamma R-mediated phagocytosis, and “metabolism”-related pathways such as the pentose phosphate pathway, carbon metabolism, glycerophospholipid metabolism, and glycerolipid metabolism. Similarly, 4737 DEGs were found in the kidney of infected frogs. These DEGs are mainly involved in immunity, including neutrophil extracellular trap formation, the NOD-like receptor signaling pathway, B cell receptor signaling pathway, C-type lectin receptor signaling pathway, complement and coagulation cascade, and Toll-like receptor signaling pathway. Ten immune-associated DEGs were screened in liver and kidney DEGs, respectively. And it was hypothesized that E. miricola infection could influence the host immune response. Microbiome analysis results showed that some opportunistic pathogens such as Citrobacter, Shigella, and Providencia were significantly elevated (p < 0.05) in infected frogs. Additionally, functional prediction confirmed that most of the microbiota in infected frogs were linked to metabolism-related KEGG pathways. In this study, the screened genes linked to immunity showed an association with the gut microbiome. The majority of these genes were found to be linked with the abundance of opportunistic pathogens. The results showed that E. miricola infection led to the downregulation of immune and metabolic-related genes, which led to the inhibition of immune function and metabolic disorder, and then increased the abundance of opportunistic pathogens in the gut microbiota. The findings of this study offer a preliminary foundation for comprehending the pathogenic processes of E. miricola infection in black spotted frogs.