Songhui Diao

Dr. Songhui Diao

orcid

Research Focus & Metrics

Academic Career Length

4Years (2023-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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9 January 2024 in IEEE Transactions on Medical Imaging
Verified
Journal Article
Closed access
XLXuan Liu
Xuan Liu
Yaoqin XIEYaoqin XIE
Yaoqin XIE
SDSonghui Diao
Songhui Diao
STShan Tan
Shan Tan
XLXiaokun Liang
Xiaokun Liang
During the process of computed tomography (CT), metallic implants often cause disruptive artifacts in the reconstructed images, impeding accurate diagnosis. Many supervised deep learning-based approaches have been proposed for metal artifact reduction (MAR). However, these methods heavily rely on training with paired simulated data, which are challenging to acquire. This limitation can lead to decreased performance when applying these methods in clinical practice. Existing unsupervised MAR methods, whether based on learning or not, typically work within a single domain, either in the image domain or the sinogram domain. In this paper, we propose an unsupervised MAR method based on the diffusion model, a generative model with a high capacity to represent data distributions. Specifically, we first train a diffusion model using CT images without metal artifacts. Subsequently, we iteratively introduce the diffusion priors in both the sinogram domain and image domain to restore the degraded portions caused by metal artifacts. Besides, we design temporally dynamic weight masks for the image-domian fusion. The dual-domain processing empowers our approach to outperform existing unsupervised MAR methods, including another MAR method based on diffusion model. The effectiveness has been qualitatively and quantitatively validated on synthetic datasets. Moreover, our method demonstrates superior visual results among both supervised and unsupervised methods on clinical datasets. Codes are available in github.com/DeepXuan/DuDoDp-MAR.

16 January 2023 in IEEE Journal of Biomedical and Health Informatics
Verified
Journal Article
Open access
SDSonghui Diao
Songhui Diao
WLWeiren Luo
Weiren Luo
JHJiaxin Hou
Jiaxin Hou
RLRicardo Lambo
Ricardo Lambo
HAHamas A. Al-Kuhali
Hamas A. Al-Kuhali
WQWenjian Qin
Wenjian Qin
Precise classification of histopathological images is crucial to computer-aided diagnosis in clinical practice. Magnification-based learning networks have attracted considerable attention for their ability to improve performance in histopathological classification. However, the fusion of pyramids of histopathological images at different magnifications is an under-explored area. In this paper, we proposed a novel deep multi-magnification similarity learning (DSML) approach that can be useful for the interpretation of multi-magnification learning framework and easy to visualize feature representation from low-dimension (e.g., cell-level) to high-dimension (e.g., tissue-level), which has overcome the difficulty of understanding cross-magnification information propagation. It uses a similarity cross entropy loss function designation to simultaneously learn the similarity of the information among cross-magnifications. In order to verify the effectiveness of DMSL, experiments with different network backbones and different magnification combinations were designed, and its ability to interpret was also investigated through visualization. Our experiments were performed on two different histopathological datasets: a clinical nasopharyngeal carcinoma and a public breast cancer BCSS2021 dataset. The results show that our method achieved outstanding performance in classification with a higher value of area under curve, accuracy, and F-score than other comparable methods. Moreover, the reasons behind multi-magnification effectiveness were discussed.

3 March 2024 in Computer Methods and Programs in Biomedicine
Verified
Journal Article
Closed access
XLXiang Liu
Xiang Liu
WHWan-Ming Hu
Wan-Ming Hu
SDSonghui Diao
Songhui Diao
DADeboch Eyob Abera
Deboch Eyob Abera
DRDaniel Racoceanu
Daniel Racoceanu
WQWenjian Qin
Wenjian Qin

1 October 2023 in Cancers
Verified
Journal Article
Open access
PDF file
SDSonghui Diao
Songhui Diao
Pingjun ChenPingjun Chen
Pingjun Chen
ESEman Showkatian
Eman Showkatian
RBRukhmini Bandyopadhyay
Rukhmini Bandyopadhyay
FRFrank R. Rojas
Frank R. Rojas
Jia WuJia Wu
Jia Wu
Histopathologic whole-slide images (WSI) are generally considered the gold standard for cancer diagnosis and prognosis. Survival prediction based on WSI has recently attracted substantial attention. Nevertheless, it remains a central challenge owing to the inherent difficulties of predicting patient prognosis and effectively extracting informative survival-specific representations from WSI with highly compounded gigapixels. In this study, we present a fully automated cellular-level dual global fusion pipeline for survival prediction. Specifically, the proposed method first describes the composition of different cell populations on WSI. Then, it generates dimension-reduced WSI-embedded maps, allowing for efficient investigation of the tumor microenvironment. In addition, we introduce a novel dual global fusion network to incorporate global and inter-patch features of cell distribution, which enables the sufficient fusion of different types and locations of cells. We further validate the proposed pipeline using The Cancer Genome Atlas lung adenocarcinoma dataset. Our model achieves a C-index of 0.675 (±0.05) in the five-fold cross-validation setting and surpasses comparable methods. Further, we extensively analyze embedded map features and survival probabilities. These experimental results manifest the potential of our proposed pipeline for applications using WSI in lung adenocarcinoma and other malignancies.

26 April 2023 in IEEE Journal of Biomedical and Health Informatics
Verified
Journal Article
Closed access
YTYinli Tian
Yinli Tian
WQWenjian Qin
Wenjian Qin
FXFei Xue
Fei Xue
RLRicardo Lambo
Ricardo Lambo
MYMeiyan Yue
Meiyan Yue
SLShuo Li
Shuo Li
Anatomical resection (AR) based on anatomical sub-regions is a promising method of precise surgical resection, which has been proven to improve long-term survival by reducing local recurrence. The fine-grained segmentation of an organ's surgical anatomy (FGS-OSA), i.e., segmenting an organ into multiple anatomic regions, is critical for localizing tumors in AR surgical planning. However, automatically obtaining FGS-OSA results in computer-aided methods faces the challenges of appearance ambiguities among sub-regions (i.e., inter-sub-region appearance ambiguities) caused by similar HU distributions in different sub-regions of an organ's surgical anatomy, invisible boundaries, and similarities between anatomical landmarks and other anatomical information. In this paper, we propose a novel fine-grained segmentation framework termed the “anatomic relation reasoning graph convolutional network” (ARR-GCN), which incorporates prior anatomic relations into the framework learning. In ARR-GCN, a graph is constructed based on the sub-regions to model the class and their relations. Further, to obtain discriminative initial node representations of graph space, a sub-region center module is designed. Most importantly, to explicitly learn the anatomic relations, the prior anatomic-relations among the sub-regions are encoded in the form of an adjacency matrix and embedded into the intermediate node representations to guide framework learning. The ARR-GCN was validated on two FGS-OSA tasks: i) liver segments segmentation, and ii) lung lobes segmentation. Experimental results on both tasks outperformed other state-of-the-art segmentation methods and yielded promising performances by ARR-GCN for suppressing ambiguities among sub-regions.

4 April 2024 in Engineering Applications of Artificial Intelligence
Verified
Journal Article
Closed access
SDSonghui Diao
Songhui Diao
XLXiang Liu
Xiang Liu
XLXuan Liu
Xuan Liu
BZBoyun Zheng
Boyun Zheng
JHJiahui He
Jiahui He
WQWenjian Qin
Wenjian Qin