Vadim B. Krylov

Dr. Vadim B. Krylov

orcid

Research Focus & Metrics

Academic Career Length

21Years (2006-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2010 in Journal of Biological Chemistry
Verified
Journal Article
Open access
MSMaya K. Sethi
Maya K. Sethi
FBFalk F.R. Buettner
Falk F.R. Buettner
VKVadim B. Krylov
Vadim B. Krylov
HTHideyuki Takeuchi
Hideyuki Takeuchi
NNNikolay E. Nifantiev
Nikolay E. Nifantiev
HBHans Bakker
Hans Bakker
The epidermal growth factor repeats of the Notch receptor are extensively glycosylated with three different O-glycans. O-Fucosylation and elongation by the glycosyltransferase Fringe have been well studied and shown to be essential for proper Notch signaling. In contrast, biosynthesis of O-glucose and O-N-acetylglucosamine is less well understood. Recently, the isolation of the Drosophila mutant rumi has shown that absence of O-glucose impairs Notch function. O-Glucose is further extended by two contiguous alpha1,3-linked xylose residues. We have identified two enzymes of the human glycosyltransferase 8 family, now named GXYLT1 and GXYLT2 (glucoside xylosyltransferase), as UDP-d-xylose:beta-d-glucoside alpha1,3-d-xylosyltransferases adding the first xylose. The enzymes are specific for beta-glucose-terminating acceptors and UDP-xylose as donor substrate. Generation of the alpha1,3-linkage was confirmed by nuclear magnetic resonance. Activity on a natural acceptor could be shown by in vitro xylosylation of a Notch fragment expressed in a UDP-xylose-deficient cell line and in vivo by co-expression of the enzymes and the Notch fragment in insect cells followed by mass spectrometric analysis of peptide fragments.

1 January 2012 in Journal of Biological Chemistry
Verified
Journal Article
Open access
MSMaya K. Sethi
Maya K. Sethi
FBFalk F.R. Buettner
Falk F.R. Buettner
AAAngel Ashikov
Angel Ashikov
VKVadim B. Krylov
Vadim B. Krylov
HTHideyuki Takeuchi
Hideyuki Takeuchi
HBHans Bakker
Hans Bakker
The extracellular domain of Notch contains epidermal growth factor (EGF) repeats that are extensively modified with different O-linked glycans. O-Fucosylation is essential for receptor function, and elongation with N-acetylglucosamine, catalyzed by members of the Fringe family, modulates Notch activity. Only recently, genes encoding enzymes involved in the O-glucosylation pathway have been cloned. In the Drosophila mutant rumi, characterized by a mutation in the protein O-glucosyltransferase, Notch signaling is impaired in a temperature-dependent manner, and a mouse knock-out leads to embryonic lethality. We have previously identified two human genes, GXYLT1 and GXYLT2, encoding glucoside xylosyltransferases responsible for the transfer of xylose to O-linked glucose. The identity of the enzyme further elongating the glycan to generate the final trisaccharide xylose-xylose-glucose, however, remained unknown. Here, we describe that the human gene C3ORF21 encodes a UDP-xylose:α-xyloside α1,3-xylosyltransferase, acting on xylose-α1,3-glucoseβ1-containing acceptor structures. We have, therefore, renamed it XXYLT1 (xyloside xylosyltransferase 1). XXYLT1 cannot act on a synthetic acceptor containing an α-linked xylose alone, but requires the presence of the underlying glucose. Activity on Notch EGF repeats was proven by in vitro xylosylation of a mouse Notch1 fragment recombinantly produced in Sf9 insect cells, a bacterially expressed EGF repeat from mouse Notch2 modified in vitro by Rumi and Gxylt2 and in vivo by co-expression of the enzyme with the Notch1 fragment. The enzyme was shown to be a typical type II membrane-bound glycosyltransferase localized in the endoplasmic reticulum.

12 July 2013 in Marine Drugs
Verified
Journal Article
Open access
PDF file
NUNadezhda E Ustyuzhanina
Nadezhda E Ustyuzhanina
NUNatalia A. Ushakova
Natalia A. Ushakova
KZKsenia A. Zyuzina
Ksenia A. Zyuzina
MBMaria Bilan
Maria Bilan
AEAnna L. Elizarova
Anna L. Elizarova
NNNikolay Nifantiev
Nikolay Nifantiev
Three structurally different fucoidans from the brown seaweeds Saccharina latissima (SL), Fucus vesiculosus (FV), and Cladosiphon okamuranus (CO), two chemically modified fucoidans with a higher degree of sulfation (SL-S, CO-S), and a synthetic totally sulfated octasaccharide (OS), related to fucoidans, were assessed on anticoagulant and antithrombotic activities in different in vitro experiments. The effects were shown to depend on the structural features of the compounds tested. Native fucoidan SL with a degree of sulfation (DS) of 1.3 was found to be the most active sample, fucoidan FV (DS 0.9) demonstrated moderate activity, while the polysaccharide CO (DS 0.4) was inactive in all performed experiments, even at high concentrations. Additional introduction of sulfate groups into fucoidan SL slightly decreased the anticoagulant effect of SL-S, while sulfation of CO, giving rise to the preparation CO-S, increased the activity dramatically. The high level of anticoagulant activity of polysaccharides SL, SL-S, and CO-S was explained by their ability to form ternary complexes with ATIII-Xa and ATIII-IIa, as well as to bind directly to thrombin. Synthetic per-O-sulfated octasaccharide OS showed moderate anticoagulant effect, determined mainly by the interaction of OS with the factor Xa in the presence of ATIII. Comparable tendencies were observed in the antithrombotic properties of the compounds tested.

1 September 2017 in Mendeleev Communications
Verified
Journal Article
Closed access
VAValentine P. Ananikov
Valentine P. Ananikov
Dmitry EreminDmitry Eremin
Dmitry Eremin
SYSergey A. Yakukhnov
Sergey A. Yakukhnov
ADAlexander D. Dilman
Alexander D. Dilman
VLVitalij V. Levin
Vitalij V. Levin
NNNikolay E. Nifantiev
Nikolay E. Nifantiev

11 June 2013 in Chemistry – A European Journal
Verified
Journal Article
Closed access
PDF file
MGMarina L. Gening
Marina L. Gening
DTDenis V. Titov
Denis V. Titov
SCSamy Cecioni
Samy Cecioni
AAAymeric Audfray
Aymeric Audfray
AGAlexey G. Gerbst
Alexey G. Gerbst
SVSébastien Vidal
Sébastien Vidal

15 October 2014 in Chemistry – A European Journal
Verified
Journal Article
Closed access
PDF file
VKVadim B. Krylov
Vadim B. Krylov
DADmitry A. Argunov
Dmitry A. Argunov
DVDmitry Z. Vinnitskiy
Dmitry Z. Vinnitskiy
SVStella A. Verkhnyatskaya
Stella A. Verkhnyatskaya
AGAlexey G. Gerbst
Alexey G. Gerbst
NNNikolay Nifantiev
Nikolay Nifantiev