Jong Sik Sik Kim

Prof. Jong Sik Sik Kim


Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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4 December 2020 in Microorganisms
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Journal Article
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Ehsan BariEhsan Bari
Ehsan Bari
GDGeoffrey Daniel
Geoffrey Daniel
NYNURAL YILGOR
NURAL YILGOR
JKJong Sik Sik Kim
Jong Sik Sik Kim
MGMohammad Ali Tajick Ghanbary
Mohammad Ali Tajick Ghanbary
DRDr. Javier Ribera
Dr. Javier Ribera
Fungal wood decay strategies are influenced by several factors, such as wood species, moisture content, and temperature. This study aims to evaluate wood degradation characteristics of spruce, beech, and oak after exposure to the white-rot fungi Pleurotusostreatus and Trametesversicolor. Both fungi caused high mass losses in beech wood, while spruce and oak wood were more resistant to decay. The moisture content values of the decayed wood correlated with the mass losses for all three wood species and incubation periods. Combined microscopic and chemical studies indicated that the two fungi differed in their decay behavior. While T. versicolor produced a decay pattern (cell wall erosion) typical of white-rot fungi in all wood species, P. ostreatus caused cell wall erosion in spruce and beech and soft-rot type I (cavity formation) decay in oak wood. These observations suggest that P. ostreatus may have the capacity to produce a wider range of enzymes/radicals triggered by the chemical composition of wood cell walls and/or local compositional variability within the cell wall.

20 May 2024 in Forests
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Journal Article
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ASAdya P. Singh
Adya P. Singh
JKJong Sik Sik Kim
Jong Sik Sik Kim
RMRalf Möller
Ralf Möller
RCRamesh R. Chavan
Ramesh R. Chavan
YKYoon Soo Kim
Yoon Soo Kim
This review focuses on the pivotal role microscopy has played in diagnosing the type(s) of microbial attacks present in waterlogged ancient wooden objects, and to understand the nature and extent of deterioration of such objects. The microscopic journey began with the application of light microscopy (LM) to examine the deterioration of waterlogged woods, notably foundation piles supporting historic buildings, progressing into the use of high-resolution imaging tools (SEM and TEM) and techniques. Although bacteria were implicated in the deterioration of foundation piles, confirmation that bacteria can indeed degrade wood in its native state came when decaying wood from natural environments was examined using electron microscopy, particularly TEM, which enabled bacterial association with cell wall regions undergoing degradation to be clearly resolved. The information base has been a catalyst, stimulating numerous studies in the past three decades or so to understand the nature of microbial degradation of waterlogged archaeological wood more precisely, combining LM, SEM, and TEM with high-resolution chemical analytical methods, including chemical microscopy. The emerging information is aiding targeted developments towards a more effective conservation of ancient wooden objects as they begin to be uncovered from burial and waterlogging environments.

3 October 2023 in Forests
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Journal Article
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JKJong Sik Sik Kim
Jong Sik Sik Kim
MKMinseok Kim
Minseok Kim
JLJu Won Lim
Ju Won Lim
MCMi Young Cha
Mi Young Cha
KLKwang Ho Lee
Kwang Ho Lee
YKYoon Soo Kim
Yoon Soo Kim
While numerous studies have examined microbial attacks on waterlogged archaeological wood, limited information is available regarding microbial attacks in waterlogged tropical hardwoods submerged in marine environments. In this context, we explored microbial attacks in waterlogged archaeological rosewood (Dalbergia species), a tropical hardwood species that was submerged in the Yellow Sea for approximately 700 years, using various microscopic techniques and next-generation sequencing (NGS) methods. Based on morphological features, Type-I soft rot decay was identified as the main decay type. Most fibers in waterlogged archaeological rosewood studied were gelatinous (G) fibers of tension wood and the mode of soft rot decay differed from fibers without the G-layer. Differences in decay resistance between vessel/axial parenchyma cells and fibers were not obvious. Vestured- and simple pit membranes showed higher decay resistance than vessel and axial parenchyma cell walls, respectively. Microbial community analysis by NGS revealed the dominance of Ascomycota and Basidiomycota in the fungal community. Various bacterial communities were also identified, although no prominent signs of bacterial decay were noted. The identified bacterial communities markedly differed from those reported previously in terms of their composition and abundance. Together, our results offer detailed insights into the microbial types and communities responsible for degrading waterlogged archaeological rosewood, contributing to a better understanding of microbial attacks in tropical hardwoods exposed to marine environments.

16 March 2022 in Holzforschung
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Journal Article
Closed access
JKJong Sik Sik Kim
Jong Sik Sik Kim
MCMi Young Cha
Mi Young Cha
KLKwang Ho Lee
Kwang Ho Lee
YKYoon Soo Kim
Yoon Soo Kim
Bacterial decay in compression wood (CW) tracheids of waterlogged archaeological wood (WAW) was investigated using light microscopy, confocal laser scanning microscopy, transmission electron microscopy (TEM), and TEM immunogold labeling. Erosion bacteria were identified as the main degraders, and the extent of cell wall degradation differed depending on the severity of CW tracheids (mild vs. severe). Mild CW tracheids showed preferential decay in the inner S2 layer, with the locally degraded and/or fragmented S3 layer remaining. In contrast, severe CW tracheids revealed gradual degradation of the cell wall from the erosion progressing from exposed faces of the cell wall as decay progressed. The overall decay was more extensive in mild than in severe CW tracheids, and degradation of the highly lignified outer S2 layer (S2L) was only detected in mild CW tracheids. TEM immunogold labeling of 1,4-β-galactan, homogalacturonan (HG), heteroxylan, and heteromannan epitopes showed that there was no preferential degradation of pectins and hemicelluloses by action of diffusible enzymes and/or agents through the un-decayed cell wall during bacterial decay, in both mild and severe CW tracheids. Inter-CW tracheid bordered pit membranes showed higher decay resistance than CW tracheid walls. Degradation of HG and heteromannan epitopes was suppressed in pit membranes.

30 September 2025 in Journal of Conservation Science
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Journal Article
Closed access
MKMin Seok Kim
Min Seok Kim
YYYong Hee Yoon
Yong Hee Yoon
HJHyeun Kyeung Jeong
Hyeun Kyeung Jeong
JKJong Sik Sik Kim
Jong Sik Sik Kim
보존과학회지 Journal of Conservation Science

20 December 2023 in Journal of Conservation Science
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Journal Article
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MKMinseok Kim
Minseok Kim
JLJu Won Lim
Ju Won Lim
MCMi Young Cha
Mi Young Cha
JKJong Sik Sik Kim
Jong Sik Sik Kim