Mystery solved?: Chromosomal sex determination arises when an autosomal locus acquires a sex-determining function. In some taxa, this process occurs often. The XY system in mammals, however, has been evolutionarily stable across a wide array of species. Fifty years ago, a variation on this norm was described in the creeping vole ( Microtus oregoni ), but the details have remained mostly unknown. Couger et al. sequenced the sex chromosomes in this species and found that the Y chromosome has been lost, the male-determining chromosome is a second X that is largely homologous to the female X, and both the maternally inherited and male-specific sex chromosomes carry vestiges of the ancestral Y. Science , this issue p. 592

Orthohantaviruses are tightly linked to the ecology and evolutionary history of their mammalian hosts. We hypothesized that in regions with dramatic climate shifts throughout the Quaternary, orthohantavirus diversity and evolution are shaped by dynamic host responses to environmental change through processes such as host isolation, host switching, and reassortment. Jemez Springs virus (JMSV), an orthohantavirus harbored by the dusky shrew (Sorex monticola) and five close relatives distributed widely in western North America, was used to test this hypothesis. Total RNAs, extracted from liver or lung tissue from 164 shrews collected from western North America during 1983–2007, were analyzed for orthohantavirus RNA by reverse transcription polymerase chain reaction (RT-PCR). Phylogenies inferred from the L-, M-, and S-segment sequences of 30 JMSV strains were compared with host mitochondrial cytochrome b. Viral clades largely corresponded to host clades, which were primarily structured by geography and were consistent with hypothesized post-glacial expansion. Despite an overall congruence between host and viral gene phylogenies at deeper scales, phylogenetic signals were recovered that also suggested a complex pattern of host switching and at least one reassortment event in the evolutionary history of JMSV. A fundamental understanding of how orthohantaviruses respond to periods of host population expansion, contraction, and secondary host contact is the key to establishing a framework for both more comprehensive understanding of orthohantavirus evolutionary dynamics and broader insights into host–pathogen systems.

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