Plant disease caused by fungus is one of the major threats to global food security, and understanding fungus–plant interactions is important for plant disease control. Research devoted to revealing the mechanisms of fungal pathogen–plant interactions has been conducted using genomics, transcriptomics, proteomics, and metabolomics. Metabolomics research based on mass spectrometric techniques is an important part of systems biology. In the past decade, the emerging field of metabolomics in plant pathogenic fungi has received wide attention. It not only provides a qualitative and quantitative approach for determining the pathogenesis of pathogenic fungi but also helps to elucidate the defense mechanisms of their host plants. This review focuses on the methods and progress of metabolomics research in fungal pathogen–plant interactions. In addition, the prospects and challenges of metabolomics research in plant pathogenic fungi and their hosts are addressed.

The addition of surface functional groups to multi-walled carbon nanotubes (MWCNTs) expands their application in engineering, materials, and life science. In the study, we explored the antifungal activities of MWCNTs with different surface groups against an important plant pathogenic fungi Fusarium graminearum. All of the OH-, COOH-, and NH₂-modified MWCNTs showed enhanced inhibition in spore elongation and germination than the pristine MWCNTs. The length of spores decreased by almost a half from 54.5 μm to 28.3, 27.4, and 29.5 μm, after being treated with 500 μg·mL⁻¹ MWCNTs-COOH, MWCNTs-OH, and MWCNTs-NH₂ separately. Furthermore, the spore germination was remarkably inhibited by surface-modified MWCNTs, and the germination rate was only about 18.2%, three times lower than pristine MWCNTs. The possible antifungal mechanism of MWCNTs is also discussed. Given the superior antifungal activity of surface modified MWCNTs and the fact that MWCNTs can be mass-produced with facile surface modification at low cost, it is expected that this carbon nanomaterial may find important applications in plant protection.

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Fusarium head blight (FHB) is a serious wheat disease caused by Fusarium graminearum (Fg) Schwabe. FHB can cause huge loss in wheat yield. In addition, trichothecene mycotoxins produced by Fg are harmful to the environment and humans. In our previous study, we obtained two mutants TPS1⁻ and TPS2⁻. Neither of these mutants could synthesize trehalose, and they produced fewer mycotoxins. To understand the complex interaction between Fg and wheat, we systematically analyzed the metabolic responses of FHB-susceptible and -resistant wheat to ddH₂O, the TPS⁻ mutants and wild type (WT) using NMR combined with multivariate analysis. More than 40 metabolites were identified in wheat extracts including sugars, amino acids, organic acids, choline metabolites and other metabolites. When infected by Fg, FHB-resistant and -susceptible wheat plants showed different metabolic responses. For FHB-resistant wheat, there were clear metabolic differences between inoculation with mutants (TPS1⁻/TPS2⁻) and with ddH₂O/WT. For the susceptible wheat, there were obvious metabolic differences between inoculation with mutant (TPS1⁻/TPS2⁻) and inoculation with ddH₂O; however, there were no significant metabolic differences between inoculation with TPS⁻ mutants and with WT. Specifically, compared with ddH₂O, resistant wheat increased the levels of Phe, p-hydroxy cinnamic acid (p-HCA), and chlorogenic acid in response to TPS⁻ mutants; however, susceptible wheat did not. Shikimate-mediated secondary metabolism was activated in the FHB-resistant wheat to inhibit the growth of Fg and reduce the production of mycotoxins. These results can be helpful for the development of FHB-resistant wheat varieties, although the molecular relationship between the trehalose biosynthetic pathway in Fg and shikimate-mediated secondary metabolism in wheat remains to be further studied.

Xanthanolides from Xanthium strumarium L. exhibit various pharmacological activities and these compounds are mainly produced in the glandular trichomes of aerial plant parts. The regulation of xanthanolide biosynthesis has never been reported in the literature. In this study, the effects of phytohormonal stimulation on xanthumin (a xanthanolide compound) biosynthesis, glandular trichomes and germacrene A synthase (GAS) gene expression in X. strumarium L. young leaves were investigated. The exogenous applications of methyl jasmonate (MeJA), indole-3-acetic acid (IAA), and gibberrellin A₃ (GA₃) at appropriate concentrations were all found to improve xanthumin biosynthesis, but in different ways. It was suggested that a higher gland density stimulated by MeJA (400 µM) or IAA (200 µM) treatment caused at least in part an improvement in xanthumin production, whereas GA₃ (10 µM) led to an improvement by up-regulating xanthumin biosynthetic genes within gland cells, not by forming more glandular trichomes. Compared to the plants before the flowering stage, plants that had initiated flowering showed enhanced xanthumin biosynthesis, but no higher gland density, an effect was similar to that caused by exogenous GA₃ treatment.