Keli Lima

Dr. Keli Lima

orcid

Research Focus & Metrics

Academic Career Length

12Years (2015-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 April 2019 in Cancer Genetics
Verified
Journal Article
Closed access
KLKeli Lima
Keli Lima
JCJuan Luiz Coelho-Silva
Juan Luiz Coelho-Silva
GKGabriela Sarti Kinker
Gabriela Sarti Kinker
DPDiego Antonio Pereira-Martins
Diego Antonio Pereira-Martins
FTFabiola Traina
Fabiola Traina
JMJoão Agostinho Machado-Neto
João Agostinho Machado-Neto

9 July 2019 in Scientific Reports
Verified
Journal Article
Open access
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KLKeli Lima
Keli Lima
JCJorge Antonio Elias Godoy Carlos
Jorge Antonio Elias Godoy Carlos
RARaquel de Melo Alves-Paiva
Raquel de Melo Alves-Paiva
HVHugo Passos Vicari
Hugo Passos Vicari
FSFábio Pires de Souza Santos
Fábio Pires de Souza Santos
JMJoão Agostinho Machado-Neto
João Agostinho Machado-Neto
JAK2/STAT signaling participates in the Ph-negative myeloproliferative neoplasms (MPN) pathophysiology and has been targeted by ruxolitinib, a JAK1/2 inhibitor. In the present study, the impact of ruxolitinib treatment on cytoskeleton-related genes expression was explored. In SET2 cells, AURKA and AURKB expression/activity were downregulated in a dose- and time-dependent manner by ruxolitinib. Reversine, a multikinase inhibitor selective for aurora kinases, reduced cell viability in a dose- and/or time-dependent manner in JAK2V617Fcells. Reversine significantly increased apoptosis and mitotic catastrophe, and reduced cell proliferation and clonogenic capacity in SET2 and HEL cells. In the molecular scenario, reversine induced DNA damage and apoptosis markers, as well as, reduced AURKA and AURKB expression/activity. In SET2 cells, reversine modulated the expression of 32 out of 84 apoptosis-related genes investigated, including downregulation of antiapoptotic (BCL2,BCL2L1, andBIRC5) and upregulation of proapoptotic (BIK,BINP3, andBNIP3L) genes. Synergism experiments indicated that low dose of reversine had a potentiating effect under ruxolitinib treatment at low doses in SET2 cells. In summary, our exploratory study establishes new targets, related to the regulation of the cellular cytoskeleton, for potential pharmacological intervention in MPN. These findings indicate that AURKA and AURKB participate in the JAK2/STAT signaling pathway and contribute to the MPN phenotype.

24 January 2022 in Cells
Verified
Journal Article
Open access
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CPCarolina Angelica Parada
Carolina Angelica Parada
IOIvan Oliveira
Ivan Oliveira
MGMayara C. F. Gewehr
Mayara C. F. Gewehr
JMJoão Agostinho Machado-Neto
João Agostinho Machado-Neto
KLKeli Lima
Keli Lima
EFEmer Ferro
Emer Ferro
Intracellular peptides (InPeps) generated by proteasomes were previously suggested as putative natural regulators of protein–protein interactions (PPI). Here, the main aim was to investigate the intracellular effects of intracellular peptide VFDVELL (VFD7) and related peptides on PPI. The internalization of the peptides was achieved using a C-terminus covalently bound cell-penetrating peptide (cpp; YGRKKRRQRRR). The possible inhibition of PPI was investigated using a NanoBiT® luciferase structural complementation reporter system, with a pair of plasmids vectors each encoding, simultaneously, either FK506-binding protein (FKBP) or FKBP-binding domain (FRB) of mechanistic target of rapamycin complex 1 (mTORC1). The interaction of FKBP–FRB within cells occurs under rapamycin induction. Results shown that rapamycin-induced interaction between FKBP–FRB within human embryonic kidney 293 (HEK293) cells was inhibited by VFD7-cpp (10–500 nM) and FDVELLYGRKKRRQRRR (VFD6-cpp; 1–500 nM); additional VFD7-cpp derivatives were either less or not effective in inhibiting FKBP–FRB interaction induced by rapamycin. Molecular dynamics simulations suggested that selected peptides, such as VFD7-cpp, VFD6-cpp, VFAVELLYGRKKKRRQRRR (VFA7-cpp), and VFEVELLYGRKKKRRQRRR (VFA7-cpp), bind to FKBP and to FRB protein surfaces. However, only VFD7-cpp and VFD6-cpp induced changes on FKBP structure, which could help with understanding their mechanism of PPI inhibition. InPeps extracted from HEK293 cells were found mainly associated with macromolecular components (i.e., proteins and/or nucleic acids), contributing to understanding InPeps’ intracellular proteolytic stability and mechanism of action-inhibiting PPI within cells. In a model of cell death induced by hypoxia-reoxygenation, VFD6-cpp (1 µM) increased the viability of mouse embryonic fibroblasts cells (MEF) expressing mTORC1-regulated autophagy-related gene 5 (Atg5), but not in autophagy-deficient MEF cells lacking the expression of Atg5. These data suggest that VFD6-cpp could have therapeutic applications reducing undesired side effects of rapamycin long-term treatments. In summary, the present report provides further evidence that InPeps have biological significance and could be valuable tools for the rational design of therapeutic molecules targeting intracellular PPI.

22 August 2019 in Investigational New Drugs
Verified
Journal Article
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BPBárbara dos Santos Passaia
Bárbara dos Santos Passaia
KLKeli Lima
Keli Lima
JKJean Lucas Kremer
Jean Lucas Kremer
BCBarbara Brito da Conceição
Barbara Brito da Conceição
BMBeatriz Marinho de Paula Mariani
Beatriz Marinho de Paula Mariani
CLClaudimara Ferini Pacicco Lotfi
Claudimara Ferini Pacicco Lotfi

29 July 2023 in Cancers
Verified
Journal Article
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KLKeli Lima
Keli Lima
LMLivia Bassani Lins de Miranda
Livia Bassani Lins de Miranda
AGAnali Bernabe Garnique
Anali Bernabe Garnique
BABruna Oliveira de Almeida
Bruna Oliveira de Almeida
MNMariane Cristina Do Nascimento
Mariane Cristina Do Nascimento
JMJoão Agostinho Machado-Neto
João Agostinho Machado-Neto
Significant advances in understanding the molecular complexity of the development and progression of pancreatic cancer have been made, but this disease is still considered one of the most lethal human cancers and needs new therapeutic options. In the present study, the antineoplastic effects of AD80, a multikinase inhibitor, were investigated in models of pancreatic cancer. AD80 reduced cell viability and clonogenicity and induced polyploidy in pancreatic cancer cells. At the molecular level, AD80 reduced RPS6 and histone H3 phosphorylation and induced γH2AX and PARP1 cleavage. Additionally, the drug markedly decreased AURKA phosphorylation and expression. In PANC-1 cells, AD80 strongly induced autophagic flux (consumption of LC3B and SQSTM1/p62). AD80 modulated 32 out of 84 autophagy-related genes and was associated with vacuole organization, macroautophagy, response to starvation, cellular response to nitrogen levels, and cellular response to extracellular stimulus. In 3D pancreatic cancer models, AD80 also effectively reduced growth independent of anchorage and cell viability. In summary, AD80 induces mitotic aberrations, DNA damage, autophagy, and apoptosis in pancreatic cancer cells. Our exploratory study establishes novel targets underlying the antineoplastic activity of the drug and provides insights into the development of therapeutic strategies for this disease.

6 April 2025 in Cell Death Discovery
Verified
Journal Article
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JCJorge Antonio Elias Godoy Carlos
Jorge Antonio Elias Godoy Carlos
MTMaurício Tavares
Maurício Tavares
KLKeli Lima
Keli Lima
LALarissa Costa de Almeida
Larissa Costa de Almeida
KWKaroline de Barros Waitman
Karoline de Barros Waitman
JMJoão Agostinho Machado-Neto
João Agostinho Machado-Neto
Epigenetic modifications significantly influence gene expression and play crucial roles in various biological processes, including carcinogenesis. This study investigates the effects of novel purine-benzohydroxamate compounds, particularly 4 f, as hybrid kinase/histone deacetylase (HDAC) inhibitors in hematological malignancies, focusing on acute myeloid leukemia (AML). Our results demonstrate that these compounds selectively reduce cell viability in blood cancer cells, with inhibitory concentration values indicating higher potency against neoplastic cells compared to normal leukocytes. Mechanistically, 4 f induces apoptosis and cell cycle arrest, promoting differentiation in leukemia cells, while effectively inhibiting HDAC activity. Furthermore, 4 f enhances the therapeutic efficacy of venetoclax, a BCL2 inhibitor, in AML models sensitive and resistant to this drug. The combination treatment significantly increases apoptosis and reduces cell viability, suggesting a synergistic effect that may overcome drug resistance. This study provides valuable insights into the potential of HDAC inhibitors, particularly 4 f, as a promising therapeutic strategy for treating resistant hematological malignancies. Our findings underscore the importance of further exploring hybrid kinase/HDAC inhibitors in combination therapies to improve outcomes in patients with acute leukemias and other hematological malignancies.