Anali Bernabe Garnique

Dr. Anali Bernabe Garnique

Universidade de São Paulo, São Paulo, Brazil
orcid

Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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13 June 2024 in Drugs and Drug Candidates
Verified
Journal Article
Open access
PDF file
AGAnali Bernabe Garnique
Anali Bernabe Garnique
NPNatália Sudan Parducci
Natália Sudan Parducci
LMLivia Bassani Lins de Miranda
Livia Bassani Lins de Miranda
BABruna Oliveira de Almeida
Bruna Oliveira de Almeida
LSLeonardo Sanches
Leonardo Sanches
JMJoão Agostinho Machado-Neto
João Agostinho Machado-Neto
The monolayer (two-dimensional or 2D) cell culture, while widely used, lacks fidelity in replicating vital cell interactions seen in vivo, leading to a shift toward three-dimensional (3D) models. Although monolayers offer simplicity and cost-effectiveness, spheroids mimic cellular environments better. This is due to its nutrient gradients, which influence drug penetration and provide a more accurate reflection of clinical scenarios than monolayers. Consequently, 3D models are crucial in drug development, especially for anti-cancer therapeutics, enabling the screening of cell cycle inhibitors and combination therapies vital for heterogeneous tumor populations. Inhibiting processes like migration and invasion often require drugs targeting the cytoskeleton, which can exhibit dual functionality with cell cycle inhibitors. Therapeutic approaches with promising anti-cancer potential often exhibit reduced efficacy in 3D cell culture compared to their performance in monolayer settings, primarily due to the heightened complexity inherent in this system. In the face of this scenario, this review aims to survey existing knowledge on compounds utilized in both 2D and 3D cell cultures, assessing their responses across different culture types and discerning the implications for drug screening, particularly those impacting the cell cycle and cytoskeletal dynamics.

8 December 2023 in Cells
Verified
Journal Article
Open access
PDF file
AGAnali Bernabe Garnique
Anali Bernabe Garnique
GMGlaucia Maria Machado-Santelli
Glaucia Maria Machado-Santelli
The study of 3D cell culture has increased in recent years as a model that mimics the tumor microenvironment (TME), which is characterized by exhibiting cellular heterogeneity, allowing the modulation of different signaling pathways that enrich this microenvironment. The TME exhibits two main cell populations: cancer-associated fibroblasts (CAFs) and tumor-associated macrophages (TAM). The aim of this study was to investigate 3D cell cultures of non-small cell lung cancer (NSCLC) alone and in combination with short-term cultured dermal fibroblasts (FDH) and with differentiated macrophages of the THP-1 cell line. Homotypic and heterotypic spheroids were morphologically characterized using light microscopy, immunofluorescence and transmission electron microscopy. Cell viability, cycle profiling and migration assay were performed, followed by the evaluation of the effects of some chemotherapeutic and potential compounds on homotypic and heterotypic spheroids. Both homotypic and heterotypic spheroids of NSCLC were generated with fibroblasts or macrophages. Heterotypic spheroids with fibroblast formed faster, while homotypic ones reached larger sizes. Different cell populations were identified based on spheroid zoning, and drug effects varied between spheroid types. Interestingly, heterotypic spheroids with fibroblasts showed similar responses to the treatment with different compounds, despite being smaller. Cellular viability analysis required multiple methods, since the responses varied depending on the spheroid type. Because of this, the complexity of the spheroid should be considered when analyzing compound effects. Overall, this study contributes to our understanding of the behavior and response of NSCLC cells in 3D microenvironments, providing valuable insights for future research and therapeutic development.

1 December 2020 in Archives of Biochemistry and Biophysics
Verified
Journal Article
Closed access
BTBianca Sayuri Takayasu
Bianca Sayuri Takayasu
IMIgor Rodrigues Martins
Igor Rodrigues Martins
AGAnali Bernabe Garnique
Anali Bernabe Garnique
SMSayuri Miyamoto
Sayuri Miyamoto
GMGláucia M. Machado-Santelli
Gláucia M. Machado-Santelli
JOJanice Onuki
Janice Onuki

29 July 2023 in Cancers
Verified
Journal Article
Open access
PDF file
KLKeli Lima
Keli Lima
LMLivia Bassani Lins de Miranda
Livia Bassani Lins de Miranda
AGAnali Bernabe Garnique
Anali Bernabe Garnique
BABruna Oliveira de Almeida
Bruna Oliveira de Almeida
MNMariane Cristina Do Nascimento
Mariane Cristina Do Nascimento
JMJoão Agostinho Machado-Neto
João Agostinho Machado-Neto
Significant advances in understanding the molecular complexity of the development and progression of pancreatic cancer have been made, but this disease is still considered one of the most lethal human cancers and needs new therapeutic options. In the present study, the antineoplastic effects of AD80, a multikinase inhibitor, were investigated in models of pancreatic cancer. AD80 reduced cell viability and clonogenicity and induced polyploidy in pancreatic cancer cells. At the molecular level, AD80 reduced RPS6 and histone H3 phosphorylation and induced γH2AX and PARP1 cleavage. Additionally, the drug markedly decreased AURKA phosphorylation and expression. In PANC-1 cells, AD80 strongly induced autophagic flux (consumption of LC3B and SQSTM1/p62). AD80 modulated 32 out of 84 autophagy-related genes and was associated with vacuole organization, macroautophagy, response to starvation, cellular response to nitrogen levels, and cellular response to extracellular stimulus. In 3D pancreatic cancer models, AD80 also effectively reduced growth independent of anchorage and cell viability. In summary, AD80 induces mitotic aberrations, DNA damage, autophagy, and apoptosis in pancreatic cancer cells. Our exploratory study establishes novel targets underlying the antineoplastic activity of the drug and provides insights into the development of therapeutic strategies for this disease.

20 October 2020 in bioRxiv
Verified
Preprint
Open access
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BFBianca Helena Ventura Fernandes
Bianca Helena Ventura Fernandes
NFNatália Martins Feitosa
Natália Martins Feitosa
ABAna Paula Barbosa
Ana Paula Barbosa
CBCamila Gasque Bomfim
Camila Gasque Bomfim
AGAnali Bernabe Garnique
Anali Bernabe Garnique
ICIves Charlie-Silva
Ives Charlie-Silva
Summary: Establishing new experimental animal models to assess the safety and immune response to the antigen used in the development of COVID-19 vaccine is an imperative issue. Based on the advantages of using zebrafish as a model in research, herein we suggest doing this to test the safety of the putative vaccine candidates and to study immune response against the virus. We produced a recombinant N-terminal fraction of the Spike SARS-CoV-2 protein and injected it into adult female zebrafish. The specimens generated humoral immunity and passed the antibodies to the eggs. However, they presented adverse reactions and inflammatory responses similar to severe cases of human COVID-19. The analysis of the structure and function of zebrafish and human Angiotensin-converting enzyme 2, the main human receptor for virus infection, presented remarkable sequence similarities. Moreover, bioinformatic analysis predicted protein-protein interaction of the Spike SARS-CoV-2 fragment and the Toll-like receptor pathway. It might help in the choice of future therapeutic pharmaceutical drugs to be studied. Based on the in vivo and in silico results presented here, we propose the zebrafish as a model for translational research into the safety of the vaccine and the immune response of the vertebrate organism to the SARS-CoV-2 virus.

4 March 2022 in Environmental Advances
Verified
Journal Article
Open access
ÉDÉvila Pinheiro Damasceno
Évila Pinheiro Damasceno
ICIves Charlie-Silva
Ives Charlie-Silva
GMGlaucia Maria Machado-Santelli
Glaucia Maria Machado-Santelli
AGAnali Bernabe Garnique
Anali Bernabe Garnique
JMJoão Agostinho Machado-Neto
João Agostinho Machado-Neto
Maria PavlakiMaria Pavlaki
Maria Pavlaki