Jakub M. Surmacki

Jakub M. Surmacki

Lodz University of Technology, Faculty of Chemistry
orcid
prof of TUL dr hab

Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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18 February 2015 in The Analyst
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Journal Article
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HAHalina Abramczyk
Halina Abramczyk
Jakub M. SurmackiJakub M. Surmacki
Jakub M. Surmacki
MKMonika Kopeć
Monika Kopeć
AOAlicja Klaudia Olejnik
Alicja Klaudia Olejnik
Katarzyna Lubecka-GajewskaKatarzyna Lubecka-Gajewska
Katarzyna Lubecka-Gajewska
KFKrystyna Fabianowska-Majewska
Krystyna Fabianowska-Majewska
We have studied live non-malignant (MCF10A), mildly malignant (MCF7) and malignant (MDA-MB-231) breast cancer cells and human breast cancer tissue. We demonstrate the first application of Raman imaging and spectroscopy in diagnosing the role of lipid droplets in cell line cultures that closely mimic an in vivo environment of various stages in human breast cancer tissue. We have analyzed the composition of the lipid droplets in non-malignant and malignant human breast epithelial cell lines and discussed the potential of lipid droplets as a prognostic marker in breast cancer. To identify any difference in the lipid droplet-associated biochemistry and to correlate it with different stages of breast cancer, the PCA method was employed. The chemical composition of lipids and proteins, both in the cell line models and in human breast tissue has been analyzed. The paper shows the alterations in lipid metabolism that have been reported in cancer, at both the cellular and tissue levels, and discusses how they contribute to the different aspects of tumourigenesis.

24 May 2013 in Molecular Cancer
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Journal Article
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Jakub M. SurmackiJakub M. Surmacki
Jakub M. Surmacki
JMJacek Musial
Jacek Musial
RKRadzislaw Kordek
Radzislaw Kordek
HAHalina Abramczyk
Halina Abramczyk
Background: One of the most important areas of Raman medical diagnostics is identification and characterization of cancerous and noncancerous tissues. The methods based on Raman scattering has shown significant potential for probing human breast tissue to provide valuable information for early diagnosis of breast cancer. A vibrational fingerprint from the biological tissue provides information which can be used to identify, characterize and discriminate structures in breast tissue, both in the normal and cancerous environment. Results: The paper reviews recent progress in understanding structure and interactions at biological interfaces of the human tissue by using confocal Raman imaging and IR spectroscopy. The important differences between the noncancerous and cancerous human breast tissues were found in regions characteristic for vibrations of carotenoids, fatty acids, proteins, and interfacial water. Particular attention was paid to the role played by unsaturated fatty acids and their derivatives as well as carotenoids and interfacial water. Conclusions: We demonstrate that Raman imaging has reached a clinically relevant level in regard to breast cancer diagnosis applications. The results presented in the paper may have serious implications on understanding mechanisms of interactions in living cells under realistically crowded conditions of biological tissue.

1 January 2012 in Progress in Biophysics and Molecular Biology
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Journal Article
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HAHalina Abramczyk
Halina Abramczyk
Beata Brozek-PluskaBeata Brozek-Pluska
Beata Brozek-Pluska
Jakub M. SurmackiJakub M. Surmacki
Jakub M. Surmacki
JJJoanna Jablonska-Gajewicz
Joanna Jablonska-Gajewicz
RKRadzisław Kordek
Radzisław Kordek

12 January 2015 in The Analyst
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Journal Article
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Jakub M. SurmackiJakub M. Surmacki
Jakub M. Surmacki
Beata Brozek-PluskaBeata Brozek-Pluska
Beata Brozek-Pluska
RKRadzislaw Kordek
Radzislaw Kordek
HAHalina Abramczyk
Halina Abramczyk
The paper demonstrates that Raman imaging has reached a clinically relevant level in regard to breast cancer diagnosis applications.

13 December 2019 in Cancers
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Journal Article
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HAHalina Abramczyk
Halina Abramczyk
AIAnna Imiela
Anna Imiela
Beata Brozek-PluskaBeata Brozek-Pluska
Beata Brozek-Pluska
MKMonika Kopeć
Monika Kopeć
Jakub M. SurmackiJakub M. Surmacki
Jakub M. Surmacki
ASAgnieszka Sliwinska
Agnieszka Sliwinska
(1) Background: Novel methods are required for analysing post-translational modifications of protein phosphorylation by visualizing biochemical landscapes of proteins in human normal and cancerous tissues and cells. (2) Methods: A label-free Raman method is presented for detecting spectral changes that arise in proteins due to phosphorylation in the tissue of human breasts, small intestines, and brain tumours, as well as in the normal human astrocytes and primary glioblastoma U-87 MG cell lines. Raman spectroscopy and Raman imaging are effective tools for monitoring and analysing the vibrations of functional groups involved in aberrant phosphorylation in cancer without any phosphorecognition of tag molecules. (3) Results: Our results based on 35 fresh human cancer and normal tissues prove that the aberrant tyrosine phosphorylation monitored by the unique spectral signatures of Raman vibrations is a universal characteristic in the metabolic regulation in different types of cancers. Overexpressed tyrosine phosphorylation in the human breast, small intestine and brain tissues and in the human primary glioblastoma U-87 MG cell line was monitored by using Raman biomarkers. (4) We showed that the bands at 1586 cm−1 and 829 cm−1, corresponding to phosphorylated tyrosine, play a pivotal role as a Raman biomarker of the phosphorylation status in aggressive cancers. We found that the best Raman biomarker of phosphorylation is the 1586/829 ratio showing the statistical significance at p Values of ≤ 0.05. (5) Conclusions: Raman spectroscopy and imaging have the potential to be used as screening functional assays to detect phosphorylated target proteins and will help researchers to understand the role of phosphorylation in cellular processes and cancer progression. The abnormal and excessive high level of tyrosine phosphorylation in cancer samples compared with normal samples was found in the cancerous human tissue of breasts, small intestines and brain tumours, as well as in the mitochondria and lipid droplets of the glioblastoma U-87 MG cell line. Detailed insights are presented into the intracellular oncogenic metabolic pathways mediated by phosphorylated tyrosine.

22 August 2018 in Scientific Reports
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Journal Article
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Jakub M. SurmackiJakub M. Surmacki
Jakub M. Surmacki
BWBenjamin J. Woodhams
Benjamin J. Woodhams
AHAlexandria Haslehurst
Alexandria Haslehurst
BPBruce A. J. Ponder
Bruce A. J. Ponder
SBSarah Elizabeth Bohndiek
Sarah Elizabeth Bohndiek
Live cell Raman micro-spectroscopy is emerging as a promising bioanalytical technique for label-free discrimination of a range of different cell types (e.g. cancer cells and fibroblasts) and behaviors (e.g. apoptosis). The aim of this study was to determine whether confocal Raman micro-spectroscopy shows sufficient sensitivity and specificity for identification of primary human bronchial epithelial cells (HBECs) to be used for live cell biological studies in vitro. We first compared cell preparation substrates and media, considering their influence on lung cell proliferation and Raman spectra, as well as methods for data acquisition, using different wavelengths (488 nm, 785 nm) and scan protocols (line, area). Evaluating these parameters using human lung cancer (A549) and fibroblast (MRC5) cell lines confirmed that line-scan data acquisition at 785 nm using complete cell media on a quartz substrate gave optimal performance. We then applied our protocol to acquisition of data from primary human bronchial epithelial cells (HBEC) derived from three independent sources, revealing an average sensitivity for different cell types of 96.3% and specificity of 95.2%. These results suggest that Raman micro-spectroscopy is suitable for delineating primary HBEC cell cultures, which in future could be used for identifying different lung cell types within co-cultures and studying the process of early carcinogenesis in lung cell culture.