Danny Donaghy

Prof. Danny Donaghy

orcid

Research Focus & Metrics

Academic Career Length

17Years (2010-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 December 2020 in Journal of Dairy Science
Verified
Journal Article
Open access
SHS.J. Hendriks
S.J. Hendriks
CPC.V.C. Phyn
C.V.C. Phyn
JHJ.M. Huzzey
J.M. Huzzey
KMK.R. Mueller
K.R. Mueller
STSally-Anne Turner
Sally-Anne Turner
JRJohn R. Roche
John R. Roche
Until recently, animal behavior has been studied through close and extensive observation of individual animals and has relied on subjective assessments. Wearable technologies that allow the automation of dairy cow behavior recording currently dominate the precision dairy technology market. Wearable accelerometers provide new opportunities in animal ethology using quantitative measures of dairy cow behavior. Recent research developments indicate that quantitative measures of behavior may provide new objective on-farm measures to assist producers in predicting, diagnosing, and managing disease or injury on farms and allowing producers to monitor cow comfort and estrus behavior. These recent research developments and a large increase in the availability of wearable accelerometers have led to growing interest of both researchers and producers in this technology. This review aimed to summarize the studies that have validated lying behavior derived from accelerometers and to describe the factors that should be considered when using leg-attached accelerometers and neck-worn collars to describe lying behavior (e.g., lying time and lying bouts) in dairy cows for research purposes. Specifically, we describe accelerometer technology, including the instrument properties and methods for recording motion; the raw data output from accelerometers; and methods developed for the transformation of raw data into meaningful and interpretable information. We highlight differences in validation study outcomes for researchers to consider when developing their own experimental methodology for the use of accelerometers to record lying behaviors in dairy cows. Finally, we discuss several factors that may influence the data recorded by accelerometers and highlight gaps in the literature. We conclude that researchers using accelerometers to record lying behaviors in dairy cattle should (1) select an accelerometer device that, based on device attachment and sampling rate, is appropriate to record the behavior of interest; (2) account for cow-, farm-, and management-related factors that could affect the lying behaviors recorded; (3) determine the appropriate editing criteria for the accurate interpretation of their data; (4) support their chosen method of recording, editing, and interpreting the data by referencing an appropriately designed and accurate validation study published in the literature; and (5) report, in detail, their methodology to ensure others can decipher how the data were captured and understand potential limitations of their methodology. We recommend that standardized protocols be developed for collecting, analyzing, and reporting lying behavior data recorded using wearable accelerometers for dairy cattle.

14 July 2022 in Animals
Verified
Journal Article
Open access
PDF file
JJJ.M.P. Jayasinghe
J.M.P. Jayasinghe
TRThiagarajah Ramilan
Thiagarajah Ramilan
DDDanny Donaghy
Danny Donaghy
Keith PembletonKeith Pembleton
Keith Pembleton
DBDavid G. Barber
David G. Barber
The demand for dairy products is ever increasing across the world. The livestock sector is a significant source of greenhouse gas (GHG) emissions globally. The availability of high-quality pasture is a key requirement to increase the productivity of dairy cows as well as manage enteric methane emissions. Warm-season perennial grasses are the dominant forages in tropical and subtropical regions, and thus exploring their nutritive characteristics is imperative in the effort to improve dairy productivity. Therefore, we have collated a database containing a total of 4750 records, with 1277 measurements of nutritive values representing 56 tropical pasture species and hybrid cultivars grown in 26 different locations in 16 countries; this was done in order to compare the nutritive values and GHG production across different forage species, climatic zones, and defoliation management regimes. Average edaphoclimatic (with minimum and maximum values) conditions for tropical pasture species growing environments were characterized as 22.5 °C temperature (range 17.5–29.30 °C), 1253.9 mm rainfall (range 104.5–3390.0 mm), 582.6 m elevation (range 15–2393 m), and a soil pH of 5.6 (range 4.6–7.0). The data revealed spatial variability in nutritive metrics across bioclimatic zones and between and within species. The ranges of these nutrients were as follows: neutral detergent fibre (NDF) 50.9–79.8%, acid detergent fibre (ADF) 24.7–57.4%, crude protein (CP) 2.1–21.1%, dry matter (DM) digestibility 30.2–70.1%, metabolisable energy (ME)3.4–9.7 MJ kg−1 DM, with methane (CH4) production at 132.9–133.3 g animal−1 day−1. The arid/dry zone recorded the highest DM yield, with decreased CP and high fibre components and minerals. Furthermore, the data revealed that climate, defoliation frequency and intensity, in addition to their interactions, have a significant effect on tropical pasture nutritive values and CH4 production. Overall, hybrid and newer tropical cultivars performed well across different climates, with small variations in herbage quality. The current study revealed important factors that affect pasture nutritive values and CH4 emissions, with the potential for improving tropical forage through the selection and management of pasture species.

9 November 2022 in Agronomy
Verified
Journal Article
Open access
PDF file
TNThi Truong Nguyen
Thi Truong Nguyen
SNSoledad Navarrete
Soledad Navarrete
DHDavid Horne
David Horne
DDDanny Donaghy
Danny Donaghy
PKPeter Kemp
Peter Kemp
Incorporating plantain with perennial ryegrass and white clover (RGWC) can improve the quality and quantity of grazing pastures; however, the sowing rate could affect the persistence of plantain, pasture yield, and nutritive value in different seasons. The objective of this study was to evaluate the effect of increasing sowing rates of plantain when established with RGWC on the dry matter (DM) yield, botanical composition, nutritive value, and bioactive compounds of the pasture over the first two years after sowing; and to determine the relationship between plantain content and nutritive characteristics in different seasons. The pasture treatments were RGWC, RGWC + low plantain rate (PLL), RGWC + medium plantain rate (PLM), and RGWC + high plantain rate (PLH). The results showed that annual DM yield was similar between treatments. The average plantain content (including leaves and reproductive stem) was 32, 44, and 48% in PLL, PLM, and PLH, respectively. The plantain composition increased in the first 15 months, then declined rapidly to about 20–30% at day 705 after sowing. Compared with RGWC, the plantain-RGWC pastures (PLL, PLM, PLH) had a higher content of organic matter digestibility (OMD), ash, starch, non-structural carbohydrates (NSC), P, S, Ca, Mg, Na, Cl, Zn, B, Co, aucubin, acteoside, and catalpol, while they contained a lower composition of DM%, acid detergent fibre (ADF), neutral detergent fibre (NDF), crude fat (CF), Fe, and Mn. These differences were linearly associated with the content of plantain leaves in the pasture and were higher in summer and autumn than in spring. In conclusion, incorporating plantain into the RGWC pasture can improve herbage nutritive quality, thus potentially increasing farm productivity and environmental benefits. However, further work is required to investigate management interventions to sustain plantain content beyond two years from sowing.

1 November 2020 in Journal of Dairy Science
Verified
Journal Article
Open access
SHS.J. Hendriks
S.J. Hendriks
JHJ.M. Huzzey
J.M. Huzzey
BKBarbara Kuhn-Sherlock
Barbara Kuhn-Sherlock
STSally-Anne Turner
Sally-Anne Turner
KMK.R. Mueller
K.R. Mueller
JRJohn R. Roche
John R. Roche
Hypocalcemia is a common metabolic disorder of transition dairy cows that is considered a gateway disease, increasing the risk of other health disorders and reducing cow performance. Clinical milk fever is associated with long periods of recumbency, and it is plausible that cows experiencing non-paretic hypocalcemia may spend more time lying; hence, lying behavior and activity measures may be useful in identifying at-risk cows. The objective of this study was to describe associations among blood calcium (Ca) status at calving and lying behavior and activity measures during the transition period in grazing dairy cows. Blood was sampled on the day of calving (d 0), and d 1, 2, 3, and 4 postcalving, and analyzed for total plasma Ca concentration. Twenty-four multiparous Holstein-Friesian and Holstein-Friesian × Jersey grazing dairy cows were classified, retrospectively, as clinically hypocalcemic (CLIN; blood Ca ≤ 1.4 mmol/L at 1 or more consecutive samplings within 48 h postcalving, but without parturient paresis). These cows were pair-matched (using milk production potential from their estimated breeding value for milk protein, mean body weight at wk -5 and -6 precalving, and, where possible, parity) with 24 cows classified as subclinically hypocalcemic (SUB; blood Ca > 1.4 and < 2.0 mmol/L at 2 consecutive samplings within 48 h postcalving), and 24 cows classified as normocalcemic (NORM; blood Ca ≥ 2.0 mmol/L at 3 consecutive samplings within 72 h postcalving). Lying behavior and activity were monitored using triaxial accelerometers from -21 to +35 d relative to calving. Data were summarized to calculate daily lying time (h/d), daily number of lying bouts (LB; no./d), mean LB duration (min/bout), and the number of steps taken (steps/d). On d 0, the CLIN group were less active and spent approximately 2.6 h longer lying than the SUB and NORM groups, particularly between 0200 and 1400 h. On d 0, the NORM group had fewer LB (16.3/d) than the SUB and CLIN groups (18.2 and 19.2/d, respectively). These differences in behavior were no longer detected 2 d postcalving, and no further differences were observed. The day before calving, the CLIN group spent 1.4 h longer lying down than did the SUB and NORM groups. Further, the relative change in steps from a precalving baseline period (d -14 to -7) until d 0 was positively, linearly associated with blood Ca concentration within 24 h postcalving. Future work should consider daily and temporal changes in behavior in individual cows to determine the potential for these measures to allow early detection of hypocalcemia.

15 June 2020 in Animals
Verified
Journal Article
Open access
PDF file
MCMartin Correa-Luna
Martin Correa-Luna
DDDanny Donaghy
Danny Donaghy
PKPeter Kemp
Peter Kemp
MSMichael Schutz
Michael Schutz
Nicolas Lopez-VillalobosNicolas Lopez-Villalobos
Nicolas Lopez-Villalobos
In this study, we modelled and compared lactation curves of efficiency of crude protein utilisation (ECPU) and the nitrogen (N) excreta partitioning of milking cows of two contrasting spring-calving pasture-based herds to test some aspects of farming intensification practices on cow performance and N partition. In the low-intensity production system (LIPS), 257 cows were milked once-daily and fed diets comprised of pasture with low supplementary feed inclusion during lactation (304 kg pasture silage/cow). In the high-intensity production system (HIPS), 207 cows were milked twice-daily and fed pasture with higher supplementary feed inclusion (429 kg pasture silage and 1695 kg concentrate/cow). The dietary crude protein (CP) utilisation was calculated for each cow at every herd test date as the ECPU as a proportion of protein yield (PY) from the CP intake (CPI) derived from intake assessments based on metabolisable energy requirements, and the CP balance (CPB) calculated as the difference between CPI and PY. Total N excreta partitioned to faeces (FN) and urine (UN) was estimated by back-calculating UN from FN, considering dietary N, and from N retained in body tissues, taking into account live weight change during the lactation. The higher CPI (2.7 vs. 2.5 kg CP/day), along with the reduced milk yield (1100 kg milk/cow less), of the LIPS cows led to a lower ECPU (23% vs. 31%) and to a higher CPB (2.1 vs. 1.8 kg CP/day) when compared to the HIPS cows. Mean N excreta, and particularly UN, was significantly higher in LIPS cows, and this was explained by higher dietary CP and by the reduced PY when compared to the HIPS cows. Reducing the low-CP supplementation in the “de-intensified” herd lessened the ECPU, resulting in higher UN, which is sensitive in terms of body water eutrophication.

12 May 2010 in Crop & Pasture Science
Verified
Journal Article
Closed access
PDF file
LBLucy Louise Burkitt
Lucy Louise Burkitt
DDDanny Donaghy
Danny Donaghy
Philip SmethurstPhilip Smethurst
Philip Smethurst
Pasture is the cheapest source of feed for dairy cows, therefore, dairy pastures in Australia are intensively managed to maximise milk production and profits. Although soil testing commonly suggests that soils used for dairy pasture production have adequate supplies of phosphorus (P), many Australian dairy farmers still apply fertiliser P, often by applying smaller rates more frequently throughout the year. This study was designed to test the hypotheses that more frequent, but lower rates of P fertiliser applied strategically throughout the growing season have no effect on dry matter production and P concentration in perennial ryegrass (Lolium perenne L.), when soil extractable P concentrations are above the critical value reported in the literature. Three field sites were established on rain-fed dairy pasture soils ranging in P sorption capacity and with adequate soil P concentrations for maximising pasture production. Results showed that applied P fertiliser had no effect on pasture production across the 3 sites (P > 0.05), regardless of rate or the season in which the P was applied, confirming that no P fertiliser is required when soil extractable P concentrations are adequate. This finding challenges the viability of the current industry practice. In addition, applying P fertiliser as a single annual application in summer did not compromise pasture production at any of the 3 sites (P > 0.05), which supports the current environmental recommendations of applying P during drier conditions, when the risk of surface P runoff is generally lower. The current results also demonstrate that the short-term cessation of P fertiliser application may be a viable management option, as a minimal reduction in pasture production was measured over the experimental period.