Yan-Ru Deng

Dr. Yan-Ru Deng


Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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18 August 2021 in Evidence-Based Complementary and Alternative Medicine
Verified
Journal Article
Open access
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XCXiaoxiao Chen
Xiaoxiao Chen
YHYongzhi He
Yongzhi He
YDYan-Ru Deng
Yan-Ru Deng
Betel nut, the fruit of Areca catechu L, has a long medical history in Southeast Asia. It is native to Malaysia and is cultivated and processed extensively in subtropical regions, such as South China and India. Betel nut almost appears as a snack in various occasions in most parts of China. Clinically, betel nut can play a certain pharmacology role and was used in malaria, ascariasis, arthritis, enterozoic abdominalgia, stagnation of food, diarrhea, edema, and beriberi. The nervous excitement of betel nut chewing has made it gradually become popular. However, chewing betel nut can induce oral submucosal fibrosis (OSF) and oral cancer (OC). At the same time, long-term chewing of betel nut also causes inhaled asthma, sperm reducing, betel quid dependence (BQD), and uterine and esophageal cancers. The main components of processed betel nut are the goal of this review. This study will mainly start from the pharmacological activity and toxicology study of betel nut in recent years, aiming to seek its advantages and disadvantages. In the meantime, this study will analyze and emphasize that betel nut and arecoline are the high-risk factors for oral cancer, which should arouse attention and vigilance of the public.

21 December 2022 in Frontiers in Chemistry
Verified
Journal Article
Open access
XCXiang Cui
Xiang Cui
SDShanshan Deng
Shanshan Deng
GLGuoyin Li
Guoyin Li
YZYunxia Zhang
Yunxia Zhang
LWLining Wang
Lining Wang
YDYan-Ru Deng
Yan-Ru Deng
Two undescribed butenolide derivatives, asperteretal J (1) and K (2), together with 13 known ones (3–15) were isolated from an endophytic fungus Aspergillus terreus SGP-1, the fermentation product of which exhibited selective inhibitory activity toward butyrylcholinesterase. The structures of the new compounds were elucidated based on HRMS and NMR data, and the absolute configurations were determined by specific optical rotation comparison. All compounds were evaluated for cholinesterase inhibitory effects with galantamine as a positive control. Compounds 4–8 selectively inhibited butyrylcholinesterase with IC50 values of 18.4–45.8 µM in a competitive manner, with Ki values of 12.3–38.2 µM. The structure-activity relationship was discussed. Molecular docking and dynamic simulation of the inhibitor-enzyme complex were performed to better understand the interactions.

8 January 2024 in Molecules
Verified
Journal Article
Open access
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XCXiang Cui
Xiang Cui
ZHZehong Huang
Zehong Huang
SDShanshan Deng
Shanshan Deng
YZYunxia Zhang
Yunxia Zhang
GLGuoyin Li
Guoyin Li
WCWu Changjing
Wu Changjing
The phytochemical investigation of Cortex Mori Radicis led to the isolation and identification of a new prenylated benzofuranone (1) and four ring-opening derivatives (2–5) named albaphenol A–E, as well as nigranol A (6), together with ten 2-arylbenzofuran derivatives (7–16). The characterization of the structures of the new compounds and the structural revision of nigranol A (6) were conducted using the comprehensive analysis of spectroscopic data (1D/2D NMR, HRESIMS, CD, and XRD). Compounds 1–16 were tested for their inhibitory effects on acetylcholinesterase (AChE) and butyrylcholinesterase (BChE). Compounds 1 and 4 showed weak BChE-inhibitory activity (IC50 45.5 and 61.0 μM); six 2-arylbenzofuran derivatives showed more-potent BChE-inhibitory activity (IC50 2.5–32.8 μM) than the positive control galantamine (IC50 35.3 μM), while being inactive or weakly inhibitory toward AChE. Cathafuran C (14) exhibited the most potent and selective inhibitory activity against BChE in a competitive manner, with a Ki value of 1.7 μM. The structure–activity relationships of the benzofuran-type stilbenes were discussed. Furthermore, molecular docking and dynamic simulations were performed to clarify the interactions of the inhibitor–enzyme complex.

14 June 2024 in Molecules
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Journal Article
Open access
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YLYingpeng Li
Yingpeng Li
XKXianxiu Kong
Xianxiu Kong
XCXinhong Chu
Xinhong Chu
HFHui Fu
Hui Fu
XFXinchi Feng
Xinchi Feng
JGJun Ge
Jun Ge
The malignancy of breast cancer poses a global challenge, with existing treatments often falling short of desired efficacy. Extensive research has underscored the effectiveness of targeting the metabolism of nicotinamide adenine dinucleotide (NAD), a pivotal molecule crucial for cancer cell survival and growth, as a promising anticancer strategy. Within mammalian cells, sustaining optimal NAD concentrations relies on two key enzymes, namely nicotinamide phosphoribosyltransferase (NAMPT) and poly(ADP-ribose) polymer 1 (PARP1). Recent studies have accentuated the potential benefits of combining NAMPT inhibitors and PARP1 inhibitors to enhance therapeutic outcomes, particularly in breast cancer. In this study, we designed and synthesized eleven novel NAMPT/PARP1 dual-target inhibitors. Among them, compound DDY02 exhibited acceptable inhibitory activities against both NAMPT and PARP1, with IC50 values of 0.01 and 0.05 µM, respectively. Moreover, in vitro evaluations revealed that treatment with DDY02 resulted in proliferation inhibition, NAD depletion, DNA damage, apoptosis, and migration inhibition in MDA-MB-468 cells. These results posit DDY02, by targeting NAD metabolism through inhibiting both NAMPT and PARP1, as a promising lead compound for the development of breast cancer therapy.

8 May 2026 in Molecules
Verified
Journal Article
Open access
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XCXiang Cui
Xiang Cui
XZXiu-Cheng Zhu
Xiu-Cheng Zhu
SYShu-Qi Yao
Shu-Qi Yao
RWRui Wang
Rui Wang
YZYunxia Zhang
Yunxia Zhang
WCWu Changjing
Wu Changjing
Alzheimer’s disease (AD) is a common neurodegenerative disorder linked to cholinergic dysfunction, with butyrylcholinesterase (BChE) being a key therapeutic target for moderate–severe AD. Cortex Mori Radicis, a traditional Chinese medicinal herb, is rich in Diels–Alder adducts with potential neuroprotective effects; here, eighteen Diels–Alder adducts (four new: morusalbanol B–E, 1–4) were isolated and identified from its 80% ethanol extract. Their cholinesterase inhibitory activities were assessed via Ellman’s method, with enzyme kinetics and molecular docking performed for active compounds. Most compounds showed selective BChE inhibition, with kuwanon X (14) being the most potent (IC50 = 2.3 μM). morusalbanol B (1), cathayanon A (8), and kuwanon G (12) acted as noncompetitive inhibitors, while Morusalbanol C (2) and kuwanon X (14) were mixed competitive inhibitors. Molecular docking suggested that potent inhibitors occupied the BChE active pocket via hydrogen bonds, π-π stacking, and hydrophobic interactions with Trp82, His438, and Phe329. MD simulations and MM-GBSA binding free energy analysis further verified that all three representative complexes (1, 8, and 14) achieved favorable thermodynamic and structural stability, with binding driven primarily by van der Waals forces. Residue decomposition revealed that Trp82 and Phe329 served as core binding hotspots for all tested inhibitors. Structure–activity analysis indicated that a cis-trans methylcyclohexene configuration, shorter aliphatic ester chains, and more prenyl groups enhanced BChE inhibition. This study provides new lead compounds and a systematic molecular mechanism basis for developing novel anti-AD BChE inhibitors from natural products.

1 January 2026 in Microbial Bioactives
Verified
Journal Article
Closed access
FZFeng Zhao
Feng Zhao
JBJiao Bai
Jiao Bai
WCWu Changjing
Wu Changjing
YDYan-Ru Deng
Yan-Ru Deng
QPQingyun Peng
Qingyun Peng
JXJiao Xiao
Jiao Xiao
Natural products continue to serve as a foundational source of pharmacologically relevant molecules due to their chemical diversity and evolutionary optimization for biological interaction. This systematic review and meta-analysis synthesize current evidence on selected classes of bioactive natural products, including L-ascorbic acid and its derivatives, Annonaceous acetogenins, methylxanthines, butenolides, and marine-derived sesterterpenes, with a focus on their mechanistic actions and therapeutic potential. Emphasis is placed on compounds that modulate oxidative stress, mitochondrial bioenergetics, epigenetic regulation, and pathogen-specific metabolic pathways. Pharmacological concentrations of L-ascorbic acid demonstrate prooxidant activity that selectively induces cytotoxicity in cancer cells while also functioning as a cofactor for epigenetic enzymes involved in DNA demethylation. Annonaceous acetogenins, particularly chatenaytrienins, show potent inhibition of mitochondrial complex I, leading to reactive oxygen species generation and programmed cell death, although concerns regarding neurotoxicity remain. Marine suvanine sesterterpenes selectively inhibit isocitrate lyase in the glyoxylate cycle, a pathway essential for fungal virulence but absent in humans, highlighting a promising antivirulence strategy. Butenolide derivatives exhibit a wide spectrum of activities ranging from cytoprotection and cytoproliferation to antifungal and antibacterial effects, with structure–activity relationships guiding potency optimization. Quantitative synthesis of cytotoxicity and antifungal efficacy data supports the therapeutic relevance of these compounds while underscoring the importance of mechanistic specificity. Collectively, this review integrates biochemical, cellular, and computational evidence to evaluate the translational potential and limitations of these natural products in drug discovery.