Omar Lopez Ramirez

Dr. Omar Lopez Ramirez

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Research Focus & Metrics

Academic Career Length

20Years (2007-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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2 January 2020 in Nature Communications
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KOKazuya Ono
Kazuya Ono
JKJames Keller
James Keller
OROmar Lopez Ramirez
Omar Lopez Ramirez
AGAntonia Gonzalez-Garrido
Antonia Gonzalez-Garrido
OZOmid A. Zobeiri
Omid A. Zobeiri
DWDoris K. Wu
Doris K. Wu
Each vestibular sensory epithelium in the inner ear is divided morphologically and physiologically into two zones, called the striola and extrastriola in otolith organ maculae, and the central and peripheral zones in semicircular canal cristae. We found that formation of striolar/central zones during embryogenesis requires Cytochrome P450 26b1 (Cyp26b1)-mediated degradation of retinoic acid (RA). In Cyp26b1 conditional knockout mice, formation of striolar/central zones is compromised, such that they resemble extrastriolar/peripheral zones in multiple features. Mutants have deficient vestibular evoked potential (VsEP) responses to jerk stimuli, head tremor and deficits in balance beam tests that are consistent with abnormal vestibular input, but normal vestibulo-ocular reflexes and apparently normal motor performance during swimming. Thus, degradation of RA during embryogenesis is required for formation of highly specialized regions of the vestibular sensory epithelia with specific functions in detecting head motions.

1 March 2014 in Peptides
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Journal Article
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AAArmando Alexei Rodríguez Alfonso
Armando Alexei Rodríguez Alfonso
ESEmilio Salceda
Emilio Salceda
AGAnoland Georgina Garateix
Anoland Georgina Garateix
AZAndré Zaharenko
André Zaharenko
SPSteve Peigneur
Steve Peigneur
ESEnrique Soto
Enrique Soto

26 July 2007 in Biochemical Journal
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Journal Article
Open access
ESEmilio Salceda
Emilio Salceda
Javier Pérez-CastellsJavier Pérez-Castells
Javier Pérez-Castells
BLBlanca López-Méndez
Blanca López-Méndez
AGAnoland Garateix
Anoland Garateix
HSHector Salazar
Hector Salazar
GGGuillermo Giménez-Gallego
Guillermo Giménez-Gallego
CgNa (Condylactis gigantea neurotoxin) is a 47-amino-acid- residue toxin from the giant Caribbean sea anemone Condylactis gigantea. The structure of CgNa, which was solved by 1H-NMR spectroscopy, is somewhat atypical and displays significant homology with both type I and II anemone toxins. CgNa also displays a considerable number of exceptions to the canonical structural elements that are thought to be essential for the activity of this group of toxins. Furthermore, unique residues in CgNa define a characteristic structure with strong negatively charged surface patches. These patches disrupt a surface-exposed cluster of hydrophobic residues present in all anemone-derived toxins described to date. A thorough characterization by patch–clamp analysis using rat DRG (dorsal root ganglion) neurons indicated that CgNa preferentially binds to TTX-S (tetrodotoxin-sensitive) voltage-gated sodium channels in the resting state. This association increased the inactivation time constant and the rate of recovery from inactivation, inducing a significant shift in the steady state of inactivation curve to the left. The specific structural features of CgNa may explain its weaker inhibitory capacity when compared with the other type I and II anemone toxins.

1 January 2011 in Molecular Pain
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AGAnoland Garateix
Anoland Garateix
ESEmilio Salceda
Emilio Salceda
RMRoberto Menéndez
Roberto Menéndez
ERErik L Regalado
Erik L Regalado
OROmar Lopez Ramirez
Omar Lopez Ramirez
ESEnrique Soto
Enrique Soto
Background: Acid-sensing ion channels (ASICs) have a significant role in the sensation of pain and constitute an important target for the search of new antinociceptive drugs. In this work we studied the antinociceptive properties of the BM-21 extract, obtained from the sea grass Thalassia testudinum, in chemical and thermal models of nociception in mice. The action of the BM-21 extract and the major phenolic component isolated from this extract, a sulphated flavone glycoside named thalassiolin B, was studied in the chemical nociception test and in the ASIC currents of the dorsal root ganglion (DRG) neurons obtained from Wistar rats.Results: Behavioral antinociceptive experiments were made on male OF-1 mice. Single oral administration of BM-21 produced a significant inhibition of chemical nociception caused by acetic acid and formalin (specifically during its second phase), and increased the reaction time in the hot plate test. Thalassiolin B reduced the licking behavior during both the phasic and tonic phases in the formalin test. It was also found that BM-21 and thalassiolin B selectively inhibited the fast desensitizing (τ < 400 ms) ASIC currents in DRG neurons obtained from Wistar rats, with a nonsignificant action on ASIC currents with a slow desensitizing time-course. The action of thalassiolin B shows no pH or voltage dependence nor is it modified by steady-state ASIC desensitization or voltage. The high concentration of thalassiolin B in the extract may account for the antinociceptive action of BM-21.Conclusions: To our knowledge, this is the first report of an ASIC-current inhibitor derived of a marine-plant extract, and in a phenolic compound. The antinociceptive effects of BM-21 and thalassiolin B may be partially because of this action on the ASICs. That the active components of the extract are able to cross the blood-brain barrier gives them an additional advantage for future uses as tools to study pain mechanisms with a potential therapeutic application.

1 March 2010 in Peptides
Verified
Journal Article
Closed access
ESEmilio Salceda
Emilio Salceda
OROmar Lopez Ramirez
Omar Lopez Ramirez
AZAndré Zaharenko
André Zaharenko
AGAnoland Garateix
Anoland Garateix
ESEnrique Soto
Enrique Soto

Verified
Journal Article
Open access
PDF file
AGAntonia Gonzalez-Garrido
Antonia Gonzalez-Garrido
OROmar Lopez Ramirez
Omar Lopez Ramirez
AMAbel Cerda Mireles
Abel Cerda Mireles
TNThania Navarrete-Miranda
Thania Navarrete-Miranda
AFAranza Iztanami Flores-Arenas
Aranza Iztanami Flores-Arenas
MMMaria Teresa Villarreal Molina
Maria Teresa Villarreal Molina
Genetic testing is crucial in inherited arrhythmogenic channelopathies; however, the clinical interpretation of genetic variants remains challenging. Incomplete penetrance, oligogenic, polygenic or multifactorial forms of channelopathies further complicate variant interpretation. We identified the KCNQ1/p.D446E variant in 2/63 patients with long QT syndrome, 30-fold more frequent than in public databases. We thus characterized the biophysical phenotypes of wildtype and mutant IKs co-expressing these alleles with the β-subunit minK in HEK293 cells. KCNQ1 p.446E homozygosity significantly shifted IKs voltage dependence to hyperpolarizing potentials in basal conditions (gain of function) but failed to shift voltage dependence to hyperpolarizing potentials (loss of function) in the presence of 8Br-cAMP, a protein kinase A activator. Basal IKs activation kinetics did not differ among genotypes, but in response to 8Br-cAMP, IKs 446 E/E (homozygous) activation kinetics were slower at the most positive potentials. Protein modeling predicted a slower transition of the 446E Kv7.1 tetrameric channel to the stabilized open state. In conclusion, biophysical and modelling evidence shows that the KCNQ1 p.D446E variant has complex functional consequences including both gain and loss of function, suggesting a contribution to the pathogenesis of arrhythmogenic phenotypes as a functional risk allele.