Tanil Kocagoz

Dr. Tanil Kocagoz

orcid

Research Focus & Metrics

Academic Career Length

24Years (2003-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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5 November 2015 in Applied Biochemistry and Biotechnology
Verified
Journal Article
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EMErkan Mozioglu
Erkan Mozioglu
OGOzgur Gokmen
Ozgur Gokmen
Candan TamerlerCandan Tamerler
Candan Tamerler
TKTanil Kocagoz
Tanil Kocagoz
MAMuslum Akgoz
Muslum Akgoz

9 February 2024 in Frontiers in Microbiology
Verified
Journal Article
Open access
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ESElif Arik Sever
Elif Arik Sever
EBEsma Bolat
Esma Bolat
YBYeşim Beşli
Yeşim Beşli
OKOnur Karatuna
Onur Karatuna
TKTanil Kocagoz
Tanil Kocagoz
Introduction: Standard, phenotypic antimicrobial susceptibility testing (AST) methods require 16–20 h of incubation and are considered as the bottleneck in providing timely input for appropriate antimicrobial treatment. In this study, a novel adenosine triphosphate (ATP)-bioluminescence-based method which allows rapid AST within 3 h was described.Methods: Standard AST was performed for 56 Enterobacterales isolates using EUCAST disk diffusion (DD) methodology. For the bioluminescence-based rapid AST, suspensions of bacteria were prepared using Mueller–Hinton broth to obtain a turbidity of 0.5 McFarland. The suspensions were distributed into 96-well microtiter plates. ATP (20 mM) and fixed concentrations of different antibiotics were added. Following incubation at 37°C for 1 h, a luminescent reaction mixture, including the substrate luciferin and luciferase enzyme solutions, was added. The chemiluminescence was monitored using an imaging system. Light production demonstrated the presence of ATP, indicating that the isolate was susceptible to the antibiotic in the well. Absence or decrease of light intensity, compared with the growth control well, indicated the use of ATP as an indirect measure of bacterial growth, and therefore resistance to the antibiotic in the well.Results: The novel AST method was tested using a total of 348 test wells. Concordance was achieved for 290 (83.3%) of the tests, whereas 52 (14.9%) and 6 (1.7%) tests caused minor and major errors, respectively.Discussion: In this study, a bioluminescence-based rapid AST was developed based on the consumption of ATP by bacteria. Our method’s uniqueness relies on determining ATP consumption by microorganisms in the presence or absence of an antibiotic. The novel AST method described in this study lays the groundwork for obtaining rapid results, which should be considered as a proof of concept. With further optimization studies, this novel method can provide higher accuracy and be introduced into clinical practice as a routine AST method.

11 July 2023 in Scientific Reports
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Journal Article
Open access
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SSSeray Sahsuvar
Seray Sahsuvar
TKTanil Kocagoz
Tanil Kocagoz
OGOzgul Gok
Ozgul Gok
OCOzge Can
Ozge Can
Recent reports on antibiotic resistance have highlighted the need to reduce the impact of this global health issue through urgent prevention and control. The World Health Organization currently considers antibiotic resistance as one of the most dangerous threats to global health. Therefore, Antimicrobial peptides (AMPs) are promising for the development of novel antibiotic molecules due to their high antimicrobial effects, non-inducing antimicrobial resistance (AMR) properties, and broad spectrum. Hence, in this study, we developed novel antimicrobial peptide/polymer conjugates to reduce the adverse effects of TN6 (RLLRLLLRLLR) peptide. We demonstrate how our constructs function in vitro in terms of antimicrobial activity, hemolytic activity, cytotoxicity, and protease resistance. Our findings show that our molecules are effective against different types of microorganisms such as Staphylococcus aureus, Escherichia coli, Pseudomonas aeruginosa, methicillin-resistant S. aureus, vancomycin-resistant Enteroccus faecium, and Candida albicans, which are known to be pathogenic and antibiotic-resistant. Our constructs generally showed low cytotoxicity relative to the peptide in HaCaT and 3T3 cells. Especially these structures are very successful in terms of hemotoxicity. In the bacteremia model with S. aureus, the naked peptide (TN6) was hemotoxic even at 1 µg/mL, while the hemotoxicity of the conjugates was considerably lower than the peptide. Remarkably in this model, the hemolytic activity of PepC-PEG-pepC conjugate decreased 15-fold from 2.36 to 31.12 µg/mL compared to the bacteria-free 60-min treatment. This is proof that in the case of bacteremia and sepsis, the conjugates specifically direct to bacterial cell membranes rather than red blood cells. In addition, the PepC-PEG-pepC conjugate is resistant to plasma proteases. Moreover, morphological and intracellular damage of the peptide/conjugates to Escherichia coli are demonstrated in SEM and TEM images. These results suggest our molecules can be considered potential next-generation broad-spectrum antibiotic molecule/drug candidates that might be used in clinical cases such as bacteremia and sepsis.

5 February 2025 in Life
Verified
Journal Article
Open access
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TKTanil Kocagoz
Tanil Kocagoz
BTBetul Temur
Betul Temur
NÜNihan Ünübol
Nihan Ünübol
MEMerve Elmas
Merve Elmas
ZKZeynep Kanlidere
Zeynep Kanlidere
OCOzge Can
Ozge Can
Antimicrobial peptides (AMPs) are a diverse group of small, naturally occurring molecules that orchestrate the innate immune response of various organisms, from microorganisms to humans. Characterized by their broad-spectrum activity against bacteria, fungi and viruses, AMPs are increasingly recognized for their potential as novel therapeutic agents in the face of rising antibiotic resistance. Here, we present several newly designed AMPs, one of which, DTN6, exerts significant activity against several organisms with MIC values as low as 0.5 µg/mL. The D-TN6 peptide influences both bacteria and yeasts. Scanning electron microscopy and transmission electron microscopy results showed that the bacterial membrane is affected by D-TN6, which is resistant to proteases and is effective against antibiotic-resistant pathogens with hemolytic activity and low toxicity. The D-TN6 peptide is effective in vivo against standard S. aureus strains in wounds. Thus, D-TN6 is a potent antibiotic candidate with a broad spectrum of activity. Overall, AMPs are a promising tool for the development of next-generation antimicrobial agents that could mitigate global health threats posed by multidrug-resistant pathogens.

30 April 2012 in Diagnostic Microbiology and Infectious Disease
Verified
Journal Article
Closed access
TKTanil Kocagoz
Tanil Kocagoz
SASedat Altın
Sedat Altın
ÖTÖzgül Türkyılmaz
Özgül Türkyılmaz
İTİlhan Taş
İlhan Taş
PKPerihan Karaduman
Perihan Karaduman
TSThomas Silier
Thomas Silier

26 August 2021 in European Journal of Clinical Microbiology & Infectious Diseases
Verified
Journal Article
Closed access
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TKTanil Kocagoz
Tanil Kocagoz
OCOzge Can
Ozge Can
NUNeval Yurttutan Uyar
Neval Yurttutan Uyar
EAEce Aksoy
Ece Aksoy
TPTuba Polat
Tuba Polat
SKSesin Kocagoz
Sesin Kocagoz