Wookjin Choi

Dr. Wookjin Choi

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Research Focus & Metrics

Academic Career Length

19Years (2008-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2014 in Computer Methods and Programs in Biomedicine
Verified
Journal Article
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WCWookjin Choi
Wookjin Choi
TCTae-Sun Choi
Tae-Sun Choi

19 February 2018 in Medical Physics
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Journal Article
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WCWookjin Choi
Wookjin Choi
JOJung Hun Oh
Jung Hun Oh
SRSadegh Riyahi
Sadegh Riyahi
CLChia‐Ju Liu
Chia‐Ju Liu
FJFeng Jiang
Feng Jiang
WLWei Lu
Wei Lu


31 January 2013 in Entropy
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Journal Article
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WCWookjin Choi
Wookjin Choi
Tae-Sun ChoiTae-Sun Choi
Tae-Sun Choi
A computer-aided detection (CAD) system is helpful for radiologists to detect pulmonary nodules at an early stage. In this paper, we propose a novel pulmonary nodule detection method based on hierarchical block classification. The proposed CAD system consists of three steps. In the first step, input computed tomography images are split into three-dimensional block images, and we apply entropy analysis on the block images to select informative blocks. In the second step, the selected block images are segmented and adjusted for detecting nodule candidates. In the last step, we classify the nodule candidate images into nodules and non-nodules. We extract feature vectors of the objects in the selected blocks. Lastly, the support vector machine is applied to classify the extracted feature vectors. Performance of the proposed system is evaluated on the Lung Image Database Consortium database. The proposed method has reduced the false positives in the nodule candidates significantly. It achieved 95.28% sensitivity with only 2.27 false positives per scan.

1 July 2018 in Physics in Medicine & Biology
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SRSadegh Riyahi
Sadegh Riyahi
WCWookjin Choi
Wookjin Choi
CLChia-Ju Liu
Chia-Ju Liu
HZHualiang Zhong
Hualiang Zhong
AWAbraham J Wu
Abraham J Wu
WLWei Lu
Wei Lu
We proposed a framework to detect and quantify local tumor morphological changes due to chemo-radiotherapy (CRT) using a Jacobian map and to extract quantitative radiomic features from the Jacobian map to predict the pathologic tumor response in locally advanced esophageal cancer patients. In 20 patients who underwent CRT, a multi-resolution BSpline deformable registration was performed to register the follow-up (post-CRT) CT to the baseline CT image. The Jacobian map ( J ) was computed as the determinant of the gradient of the deformation vector field. The Jacobian map measured the ratio of local tumor volume change where J < 1 indicated tumor shrinkage and J > 1 denoted expansion. The tumor was manually delineated and corresponding anatomical landmarks were generated on the baseline and follow-up images. Intensity, texture and geometry features were then extracted from the Jacobian map of the tumor to quantify tumor morphological changes. The importance of each Jacobian feature in predicting pathologic tumor response was evaluated by both univariate and multivariate analysis. We constructed a multivariate prediction model by using a support vector machine (SVM) classifier coupled with a least absolute shrinkage and selection operator (LASSO) for feature selection. The SVM-LASSO model was evaluated using ten-times repeated 10-fold cross-validation (10 × 10-fold CV). After registration, the average target registration error was 4.30 ± 1.09 mm (LR:1.63 mm AP:1.59 mm SI:3.05 mm) indicating registration error was within two voxels and close to 4 mm slice thickness. Visually, the Jacobian map showed smoothly-varying local shrinkage and expansion regions in a tumor. Quantitatively, the average median Jacobian was 0.80 ± 0.10 and 1.05 ± 0.15 for responder and non-responder tumors, respectively. These indicated that on average responder tumors had 20% median volume shrinkage while non-responder tumors had 5% median volume expansion. In univariate analysis, the minimum Jacobian ( p = 0.009, AUC = 0.98) and median Jacobian ( p = 0.004, AUC = 0.95) were the most significant predictors. The SVM-LASSO model achieved the highest accuracy when these two features were selected (sensitivity = 94.4%, specificity = 91.8%, AUC = 0.94). Novel features extracted from the Jacobian map quantified local tumor morphological changes using only baseline tumor contour without post-treatment tumor segmentation. The SVM-LASSO model using the median Jacobian and minimum Jacobian achieved high accuracy in predicting pathologic tumor response. The Jacobian map showed great potential for longitudinal evaluation of tumor response.

10 September 2008 in Microscopy Research and Technique
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Muhammad Tariq MahmoodMuhammad Tariq Mahmood
Muhammad Tariq Mahmood
WCWookjin Choi
Wookjin Choi
Tae-Sun ChoiTae-Sun Choi
Tae-Sun Choi