Marek Malík

Dr. Marek Malík


Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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29 July 2021 in Applied Sciences
Verified
Journal Article
Open access
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MJMiroslav Jaščur
Miroslav Jaščur
MBMarek Bundzel
Marek Bundzel
MMMarek Malík
Marek Malík
ADAnton Dzian
Anton Dzian
Norbert FerencikNorbert Ferencik
Norbert Ferencik
FBFrantišek Babič
František Babič
Certain post-thoracic surgery complications are monitored in a standard manner using methods that employ ionising radiation. A need to automatise the diagnostic procedure has now arisen following the clinical trial of a novel lung ultrasound examination procedure that can replace X-rays. Deep learning was used as a powerful tool for lung ultrasound analysis. We present a novel deep-learning method, automated M-mode classification, to detect the absence of lung sliding motion in lung ultrasound. Automated M-mode classification leverages semantic segmentation to select 2D slices across the temporal dimension of the video recording. These 2D slices are the input for a convolutional neural network, and the output of the neural network indicates the presence or absence of lung sliding in the given time slot. We aggregate the partial predictions over the entire video recording to determine whether the subject has developed post-surgery complications. With a 64-frame version of this architecture, we detected lung sliding on average with a balanced accuracy of 89%, sensitivity of 82%, and specificity of 92%. Automated M-mode classification is suitable for lung sliding detection from clinical lung ultrasound videos. Furthermore, in lung ultrasound videos, we recommend using time windows between 0.53 and 2.13 s for the classification of lung sliding motion followed by aggregation.

19 September 2023 in Diagnostics
Verified
Journal Article
Open access
PDF file
MMMarek Malík
Marek Malík
ADAnton Dzian
Anton Dzian
MSMartin Stevik
Martin Stevik
ŠVŠtefánia Vetešková
Štefánia Vetešková
AHAbdulla Al Hakim
Abdulla Al Hakim
FBFrantišek Babič
František Babič
Background: Chest X-ray (CXR) remains the standard imaging modality in postoperative care after non-cardiac thoracic surgery. Lung ultrasound (LUS) showed promising results in CXR reduction. The aim of this review was to identify areas where the evaluation of LUS videos by artificial intelligence could improve the implementation of LUS in thoracic surgery. Methods: A literature review of the replacement of the CXR by LUS after thoracic surgery and the evaluation of LUS videos by artificial intelligence after thoracic surgery was conducted in Medline. Results: Here, eight out of 10 reviewed studies evaluating LUS in CXR reduction showed that LUS can reduce CXR without a negative impact on patient outcome after thoracic surgery. No studies on the evaluation of LUS signs by artificial intelligence after thoracic surgery were found. Conclusion: LUS can reduce CXR after thoracic surgery. We presume that artificial intelligence could help increase the LUS accuracy, objectify the LUS findings, shorten the learning curve, and decrease the number of inconclusive results. To confirm this assumption, clinical trials are necessary. This research is funded by the Slovak Research and Development Agency, grant number APVV 20-0232.

25 March 2023 in Electronics
Verified
Journal Article
Open access
PDF file
MHMaroš Hliboký
Maroš Hliboký
JMJán Magyar
Ján Magyar
MBMarek Bundzel
Marek Bundzel
MMMarek Malík
Marek Malík
MŠMartin Števík
Martin Števík
FBFrantišek Babič
František Babič
Lung ultrasound is used to detect various artifacts in the lungs that support the diagnosis of different conditions. There is ongoing research to support the automatic detection of such artifacts using machine learning. We propose a solution that uses analytical computer vision methods to detect two types of lung artifacts, namely A- and B-lines. We evaluate the proposed approach on the POCUS dataset and data acquired from a hospital. We show that by using the Fourier transform, we can analyze lung ultrasound images in real-time and classify videos with an accuracy above 70%. We also evaluate the method’s applicability for segmentation, showcasing its high success rate for B-lines (89% accuracy) and its shortcomings for A-line detection. We then propose a hybrid solution that uses a combination of neural networks and analytical methods to increase accuracy in horizontal line detection, emphasizing the pleura.

31 October 2026 in Bratislava Medical Journal
Verified
Journal Article
Closed access
PDF file
MŠMartin Števík
Martin Števík
JJJana Jágriková
Jana Jágriková
VŽVeronika Žatkuliaková
Veronika Žatkuliaková
MGMarian Grendar
Marian Grendar
JSJán Sýkora
Ján Sýkora
KZKamil Zeleňák
Kamil Zeleňák