Individual tree detection algorithms (ITD) are used to obtain accurate information about trees. Following the process of individual tree detection, it is possible to use additional processing tools to determine tree parameters such as tree height, crown base height, crown volume, or stem volume. However, many of the methods developed so far have focused on parameterising the algorithms based on the study area, height structure or tree species analysed. Applying the parameters of the method can be challenging in areas with dense and heterogeneous forests with a diverse stand structure. Therefore, this work aimed to develop a method to correct the results of ITD algorithms to identify individual trees more reliably, taking into account different ITD methods based on the Canopy Height Model. In the present study, we proposed a three-step approach to correct segmentation errors. In the first step, erroneous (under- and over-segmentation errors) and correct segments were classified. After classification, the second step was to refine the under-segmentation errors. The final step was to merge segments from the over-segmentation class with correct segments based on the specified conditions. The study was conducted in one of the most complex and diverse forest communities in Europe, making tree identification a major challenge. The accuracy of the segmentation improvements varied depending on the method applied and tree species group examined. Thus, based on the results, the paper advocates for the correction method due to its efficiency in mixed forest stands. Therefore, the present study offers a possible solution to reduce segmentation errors by considering different forest types and different CHM-based ITD methods for identifying individual trees.

Tree crown attributes are important parameters during the assessment and monitoring of forest ecosystems. Canopy height models (CHMs) derived from airborne laser scanning (ALS) data have proved to be a reliable source for extracting different biophysical characteristics of single trees and at stand level. However, ALS-derived tree measurements (e.g., mean crown diameter) can be negatively affected by pits that appear in the CHMs. Thus, we propose a novel method for generating pit-free CHMs from ALS point clouds for estimating crown attributes (i.e., area and mean diameter) at the species level. The method automatically calculates a threshold for a pixel based on the range of height values within neighbouring pixels; if the pixel falls below the threshold then it is recognized as a pitted pixel. The pit is then filled with the median of the values of the neighbouring pixels. Manually delineated individual tree crowns (ITC) of four deciduous and two coniferous species on Colour Infrared (CIR) stereo images were used as a reference in the analysis. In addition, a variety of different algorithms for constructing CHMs were compared to investigate the performance of different CHMs in similar forest conditions. Comparisons between the estimated and observed crown area (R² = 0.95, RMSE% = 19.12% for all individuals) and mean diameter (R² = 0.92, RMSE% = 12.16% for all individuals) revealed that ITC attributes were correctly estimated by segmentation of the pit-free CHM proposed in this study. The goodness of matching and geometry revealed that the delineated crowns correctly matched up to the reference data and had identical geometry in approximately 70% of cases. The results showed that the proposed method produced a CHM that estimates crown attributes more accurately than the other investigated CHMs. Furthermore, the findings suggest that the proposed algorithm used to fill pits with the median of height observed in surrounding pixels significantly improve the accuracy of the results the species level due to a higher correlation between the estimated and observed crown attributes. Based on these results, we concluded that the proposed pit filling method is capable of providing an automatic and objective solution for constructing pit-free CHMs for assessing individual crown attributes of mixed forest stands.