Turkey oak (Quercus cerris L.) is a deciduous tree species of the genus Quercus section Cerris (Fagaceae), widely distributed in Europe and Asia Minor. Throughout its vast distribution range, the species carries high phenotypic and genetic variability. Due to its high drought tolerance, Turkey oak may have great potential to be a key tree species in Central and Western Europe under climate change conditions. However, more detailed information on its phylogeny, phylogeography, phenotypic, and genetic variability is still needed for a more careful and reliable assessment of the species’ adaptation potential. To this end, based on 41 reviewed articles, we collected detailed information to support the evaluation of Turkey oak’s adaptation potential under climate change. In the reviewed articles, we observed a significantly lower number of genetic studies of the members of the section Cerris (especially the Euro-Mediterranean species) relative to the subgenus Quercus. We also identified research gaps with respect to the functional and population genetics of the species that should be addressed in the future. Nevertheless, the different evolutionary background and adaptation strategies of Turkey oak as compared to Central European white oaks, as well as its high phenotypic and genetic variability, may indeed represent a great potential for this species to support the climate adaptation of forestry in Central and Western Europe.

Knowledge on the genetic composition of Quercus petraea in south-eastern Europe is limited despite the species’ significant role in the re-colonisation of Europe during the Holocene, and the diverse climate and physical geography of the region. Therefore, it is imperative to conduct research on adaptation in sessile oak to better understand its ecological significance in the region. While large sets of SNPs have been developed for the species, there is a continued need for smaller sets of SNPs that are highly informative about the possible adaptation to this varied landscape. By using double digest restriction site associated DNA sequencing data from our previous study, we mapped RAD-seq loci to the Quercus robur reference genome and identified a set of SNPs putatively related to drought stress-response. A total of 179 individuals from eighteen natural populations at sites covering heterogeneous climatic conditions in the southeastern natural distribution range of Q. petraea were genotyped. The detected highly polymorphic variant sites revealed three genetic clusters with a generally low level of genetic differentiation and balanced diversity among them but showed a north–southeast gradient. Selection tests showed nine outlier SNPs positioned in different functional regions. Genotype-environment association analysis of these markers yielded a total of 53 significant associations, explaining 2.4–16.6% of the total genetic variation. Our work exemplifies that adaptation to drought may be under natural selection in the examined Q. petraea populations.

Soil bacterial communities play a remarkable role in nutrient cycling, significantly affecting soil organic material content, soil fertility, and, in an indirect way, plant succession processes. Conversely, vegetation type influences microbial soil life. The present study compared the bacterial microbiome composition, diversity and catabolic activity profile of topsoil samples collected under three different forest types (a twice-coppiced black locust stand, a young, naturally reforested, and a middle-aged mixed pedunculate oak stand) planted on former arable land in the early 20th century. Diversity indices determined during 16S ribosomal RNA sequencing-based metagenome analysis indicated that the black locust stand had the highest soil bacterial community diversity. At the phylum level, Acidobacteriota, Actinobacteriota, Proteobacteria, Verrucomicrobiota, Bacteroidota, and Gemmatimonadota were the most abundant taxa in the forest soils. Concerning soil parameters, redundancy analysis revealed that pH had the highest impact on bacterial community structure and pH, and soil organic carbon content on the samples’ respiration patterns. As for catabolic activity, the recently clearcut oak forest showed the lowest substrate-induced respiration, and citrate was the main driver for the inter-stand variability of microbial activity. Our results confirm that soil parameters and forest type influence the composition and functioning of the soil bacterial microbiome.

Turkey oak (Quercus cerris L.) is one of the most ecologically and economically significant deciduous tree species in the Central and Southeast European regions. The species has long been known to exhibit high levels of genetic and phenotypic variation. Recent climate response predictions for Turkey oak suggest a significant distribution extension in Europe under climate change. Since Turkey oak has relative drought-tolerant behaviour, it is regarded as a potential alternative for other forest tree species during forestry climate adaptation efforts, not only in its native regions but also in Western Europe. For this reason, the survey of existing genetic variability, genetic resources, and adaptability of this species has great significance. Next-generation sequencing approaches, such as ddRAD-seq (Double digest restriction-site associated DNA sequencing), allow the attainment of high-resolution genome-wide single nucleotide polymorphisms (SNPs). This study provides the first highly variable genome-wide SNP data for Turkey oak generated by ddRAD-seq. The dataset comprises 17 607 de novo and 26 059 reference mapped SNPs for 88 individuals from eight populations, two from Bulgaria, one from Kosovo, and five from Hungary. Reference mapping was carried out by using cork oak’s (Quercus suber L.) reference genome. The obtained high-resolution genome-wide markers are suitable for investigating selection and local adaptation and inferring genetic diversity, differentiation, and population structure. The dataset is accessible at: https://doi.org/10.5281/zenodo.8091252

Forests in the Tolna region (Hungary) are distributed at the xeric limit of broadleaved forest zones and adapted to the arid ecological conditions of the wood-steppe climate. An 85-year-old in situ gene conservation stand of Quercus virgiliana mixed with other taxa of section Quercus was studied, which was regenerated naturally by both seedlings and coppicing. To analyze the phenotypes growing within the stand and the genetic structure of the population, a total of 138 trees were sampled. For taxonomic classification, a complex of morphological traits of oak taxa growing naturally in the region was used. Out of the 12 morphotype groups, only a few trees were classified as Q. virgiliana (eight individuals) or Q. robur (nine individuals), and the majority of the trees (121 individuals) were hybrid or introgressed phenotypes of Q. virgiliana adapted to xeric conditions by its xeromorphic traits. Despite the high number of coppiced trees (89 pcs vegetatively regenerated), the genetic variation was relatively high based on 16 nSSR markers used for analyses. Some of the trees were classified as non-autochthonous with Slavonian oak origin, both by morphological traits and SSR structure. Despite some alleles being lost, the allelic diversity of the seedling trees’ group was similar to that of the group of parent generation (coppiced trees). The spatial structure of trees supported the results of morphologic classification, and Q. virgiliana and hybrid phenotypes were growing on xeric microhabitats of the stand, mostly on southeast-facing slopes or ridges of hills. Consequently, the stand might fulfill all the in situ gene conservation requirements based on the high genetic diversity measured and the high number of xeromorphic phenotypes in the context of climate change as well.

Clear-cutting is the most robust intervention in a forest ecosystem, causing marked changes in ecosystem processes. Although the effects of forest harvesting have been widely investigated, comparative studies can provide vital supplementary information concerning specific fields, including changes in soil microbiota structure and functioning. Our study examined the soil bacterial community composition, diversity, and activity of a mixed pedunculate oak stand over three years after clear-cutting based on 16S rRNA sequencing and substrate-induced respiration data. In addition, we conducted a yearly comparison with a control oak stand already in the regeneration phase. According to our results, the forest harvest caused only limited changes in the diversity, structure, and activity of the soil bacterial community of the oak stand, suggesting that soil parameters influence the soil bacterial community structure and functioning more significantly than the cessation of forest cover.