Following the exposure of a biofilm sample from a hydrothermal spring cave (Gellért Hill, Budapest, Hungary) to gamma radiation, a strain designated FeSTC15-38T was isolated and studied by polyphasic taxonomic methods. The spherical-shaped cells stained Gram-negative, were aerobic and non-motile. The pH range for growth was 6.0-9.0, with an optimum at pH 7.0. The temperature range for growth was 20-37 °C, with an optimum at 28 °C. Phylogenetic analysis based on the 16S rRNA gene sequence of the isolate indicated that the organism belongs to the genus Deinococcus. The highest sequence similarities appeared with Deinococcus hopiensis KR-140T (94.1 %), Deinococcus aquaticus PB314T (93.3 %) and Deinococcus aerophilus 5516T-11T (92.7 %). The DNA G+C content of the type strain was 68.2 mol%. The predominant fatty acids (> 10%) were iso-C16:0 and C16:1 ω7c, and the cell-wall peptidoglycan type was A3β L-Orn-Gly2-3, corroborating the assignment of the strain to the genus Deinococcus. Strain FeSTC15-38T contained MK-8 as the major menaquinone and several unidentified phospholipids, glycolipids, and phosphoglycolipids. Resistance to gamma radiation (D10) of strain FeSTC15-38T was < 3.0 kGy. According to phenotypic and genotypic data, strain FeSTC15-38T represents a novel species for which the name Deinococcus budaensis sp. nov. is proposed. The type strain is FeSTC15-38T (=NCAIM B.02630T=DSM 101791T).

Dissolved organic matter (DOM) is a key soil quality property, indicative of the organic matter stored in the soil, which may also be a function of temporal variation. This study examines whether DOM is a robust property of the soil, controlling fertility, or if it may change with time. Altogether eight sets of soil samples were collected in 2018 and 2019 from the cultivated topsoil (0–10 cm) of cropland and from a nearby grassland near Martonvásár, Hungary. The study sites were characterized by Chernozem soil and were part of a long-term experimental project comparing the effects of manure application and fertilization to the control under maize and wheat monocultures. DOM was extracted from the samples with distilled water. The dissolved organic carbon (DOC), total dissolved nitrogen (DN), biological index (BIX), fluorescence index (FI), humification index (HIX), carbon nitrogen (C/N) ratio and specific ultraviolet absorbance at 254 nm (SUVA₂₅₄) index were studied in the arable soils, and the results showed that all the DOM samples were humified, suggesting relevant microbiological contributions to the decomposition of OM and its conversion into more complex molecules (FI = 1.2–1.5, BIX = ~0.5, and HIX = ~0.9). Temporal variations were detected only for the permanent grassland where higher DOM concentration was found in spring. This increased DOM content mainly originated from humified, solid phase associated, recalcitrant OM. In contrast, there were no differences among fertilization treatments and sampling dates under cropfield conditions. Moreover, climatic conditions were not proven as a general ruler of DOM properties. Therefore, momentary DOM alone is not necessarily the direct property of soil organic matter under cropfield conditions. The application of this measure needs further details of sampling conditions to achieve adequate comparability.

Soil bacterial communities play a remarkable role in nutrient cycling, significantly affecting soil organic material content, soil fertility, and, in an indirect way, plant succession processes. Conversely, vegetation type influences microbial soil life. The present study compared the bacterial microbiome composition, diversity and catabolic activity profile of topsoil samples collected under three different forest types (a twice-coppiced black locust stand, a young, naturally reforested, and a middle-aged mixed pedunculate oak stand) planted on former arable land in the early 20th century. Diversity indices determined during 16S ribosomal RNA sequencing-based metagenome analysis indicated that the black locust stand had the highest soil bacterial community diversity. At the phylum level, Acidobacteriota, Actinobacteriota, Proteobacteria, Verrucomicrobiota, Bacteroidota, and Gemmatimonadota were the most abundant taxa in the forest soils. Concerning soil parameters, redundancy analysis revealed that pH had the highest impact on bacterial community structure and pH, and soil organic carbon content on the samples’ respiration patterns. As for catabolic activity, the recently clearcut oak forest showed the lowest substrate-induced respiration, and citrate was the main driver for the inter-stand variability of microbial activity. Our results confirm that soil parameters and forest type influence the composition and functioning of the soil bacterial microbiome.

In this study, scanning electron microscopy (SEM) and 16S rRNA gene-based phylogenetic approach were applied to reveal the morphological structure and genetic diversity of thermophilic prokaryotic communities of a thermal karst well located in Budapest (Hungary). Bacterial and archaeal diversity of the well water (73.7 °C) and the biofilm developed on the inner surface of an outflow pipeline of the well were studied by molecular cloning method. According to the SEM images calcium carbonate minerals serve as a surface for colonization of bacterial aggregates. The vast majority of the bacterial and archaeal clones showed the highest sequence similarities to chemolithoautotrophic species. The bacterial clone libraries were dominated by sulfur oxidizer Thiobacillus (Betaproteobacteria) in the water and Sulfurihydrogenibium (Aquificae) in the biofilm. A relatively high proportion of molecular clones represented genera Thermus and Bellilinea in the biofilm library. The most abundant phylotypes both in water and biofilm archaeal clone libraries were closely related to thermophilic ammonia oxidizer Nitrosocaldus and Nitrososphaera but phylotypes belonging to methanogens were also detected. The results show that in addition to the bacterial sulfur and hydrogen oxidation, mainly archaeal ammonia oxidation may play a decisive role in the studied thermal karst system.