Bürke ÇIRÇIRLI

Dr. Bürke ÇIRÇIRLI


Research Focus & Metrics

Academic Career Length

3Years (2024-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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21 November 2024 in Pharmaceuticals
Verified
Journal Article
Open access
PDF file
YDYagmur Dilber
Yagmur Dilber
Tuğçe ÇekerTuğçe Çeker
Tuğçe Çeker
AÖAleyna Öztüzün
Aleyna Öztüzün
Bürke ÇIRÇIRLIBürke ÇIRÇIRLI
Bürke ÇIRÇIRLI
EKEsma Kırımlıoğlu
Esma Kırımlıoğlu
Mutay Aydın AslanMutay Aydın Aslan
Mutay Aydın Aslan
Background: The aim of this study was to determine the effect of Sparstolonin B (SsnB) on cell proliferation and apoptosis in human breast cancer (MCF-7) and human ovarian epithelial cancer (OVCAR-3) cell lines in the presence and absence of estradiol hemihydrate (ES). Phosphoinositol-3 kinase (PI3K), phosphorylated protein kinase B alpha (p-AKT), phosphorylated mTOR (mechanistic target of rapamycin) signaling proteins, and sphingomyelin/ceramide metabolites were also measured within the scope of the study. Methods: The anti-proliferative effects of SsnB therapy were evaluated over a range of times and concentrations. Cell proliferation was determined by measuring the Proliferating Cell Nuclear Antigen (PCNA). PCNA was quantified by ELISA and cell distribution was assessed by immunofluorescence microscopy. MTT analysis was used to test the vitality of the cells, while LC-MS/MS was used to analyze the amounts of ceramides (CERs), sphingosine-1-phosphate (S1P), and sphingomyelins (SMs). TUNEL labeling was used to assess apoptosis, while immunofluorescence staining and enzyme-linked immunosorbent assay (ELISA) were used to measure the levels of PI3K, p-AKT, and p-mTOR proteins. Results: Sparstolonin B administration significantly decreased cell viability in MCF-7 and OVCAR-3 cells both in the presence and absence of ES, while it did not cause toxicity in healthy human fibroblasts. In comparison to controls, cancer cells treated with SsnB showed a significant drop in the levels of S1P, PI3K, p-AKT, and p-mTOR. In cancer cells cultured with SsnB, a significant increase in intracellular concentrations of C16-C24 CERs and apoptosis was observed. Conclusions: SsnB downregulated the levels of S1P, PI3K, p-AKT, and p-mTOR while reducing cell proliferation and promoting ceramide buildup and apoptosis.

Verified
Journal Article
Open access
PDF file
ZBZerrin Barut
Zerrin Barut
ÖKözlem Karataş
özlem Karataş
FAFatma Tuba Fatma Tuba Akdeniz
Fatma Tuba Fatma Tuba Akdeniz
Bürke ÇIRÇIRLIBürke ÇIRÇIRLI
Bürke ÇIRÇIRLI
STSerpil Tuna
Serpil Tuna
TITurgay Isbir
Turgay Isbir
Fibromyalgia Syndrome (FMS) is a chronic syndrome commonly characterized by widespread musculoskeletal pain and fatigue. Current evidence suggests that FMS diagnosis relies on clinical evaluation and patient-reported symptoms. MicroRNAs, which serve as key regulators of gene expression, have been proposed to play a role in the pathogenesis of FMS and other chronic pain syndromes. In this pilot study, miRNA-223-3p expression levels were examined in patients with FMS, and their relationship with pain intensity—assessed using the Visual Analog Scale (VAS)was evaluated. To obtain a broader understanding of the inflammatory response, serum interleukin-1 beta (IL-1β) levels were also measured. miRNA-223-3p expression levels were significantly reduced in the FMS group compared with healthy controls (p < 0.05), whereas IL-1β levels did not differ significantly between the groups (p = 0.1135). The negative correlation between miRNA-223-3p and VAS scores indicates that lower miRNA levels are associated with increased pain severity. Overall, these results suggest that reduced miRNA-223-3p expression levels may be linked to neuroimmune processes and heightened pain perception in FMS. The findings provide valuable preliminary insights that may guide future studies with larger sample sizes.

1 July 2024 in Pharmaceuticals
Verified
Journal Article
Open access
PDF file
ZBZerrin Barut
Zerrin Barut
Mutay Aydın AslanMutay Aydın Aslan
Mutay Aydın Aslan
Bürke ÇIRÇIRLIBürke ÇIRÇIRLI
Bürke ÇIRÇIRLI
Tuğçe ÇekerTuğçe Çeker
Tuğçe Çeker
Çağatay YılmazÇağatay Yılmaz
Çağatay Yılmaz
Background: This study aimed to examine the effect of 7-Ketositosterol (7-KSS), on sphingomyelin/ceramide metabolites and apoptosis in human breast MCF-7 and human liver HepG2 cancer cells. Methods: Anti-proliferative effects of 7-KSS treatment were assessed at different concentrations and periods. Cell viability was assessed through MTT analysis, whereas the levels of sphingosine-1-phosphate (S1P), sphingomyelins (SMs), and ceramides (CERs) were measured using LC-MS/MS. Phosphorylated 44/42 ERK1/2 and NF-κB p65 (Ser536) protein levels were measured by Western blot analysis and immunofluorescence staining. Apoptosis was evaluated by TUNEL staining and flow cytometric assessment of annexin-V and propidium iodide (PI) labeling. Results: Treatment with 7-KSS significantly decreased cell survival and S1P, p-44/42 ERK1/2, and p-NF-κB p65 protein levels in cancer cells compared to controls. A substantial rise was detected in intracellular amounts of C16-C24 CERs and apoptosis in cancer cells incubated with 7-KSS. Conclusions: 7-KSS stimulated ceramide accumulation and apoptosis while decreasing cell proliferation via downregulating S1P, p-44/42 ERK1/2, and p-NF-κB p65 protein levels.

21 February 2025 in Pharmaceuticals
Verified
Journal Article
Open access
PDF file
Bürke ÇIRÇIRLIBürke ÇIRÇIRLI
Bürke ÇIRÇIRLI
Çağatay YılmazÇağatay Yılmaz
Çağatay Yılmaz
Tuğçe ÇekerTuğçe Çeker
Tuğçe Çeker
ZBZerrin Barut
Zerrin Barut
EKEsma Kırımlıoğlu
Esma Kırımlıoğlu
Mutay Aydın AslanMutay Aydın Aslan
Mutay Aydın Aslan
Background: Sparstolonin B (SsnB), a natural compound with anti-inflammatory and anti-proliferative properties, was investigated for its effects on cell viability, apoptosis, and inflammatory pathways in human colorectal cancer cells (HCT-116) and healthy human fibroblasts (BJ). Phorbol 12-myristate 13-acetate (PMA), a tumor promoter and inflammatory activator, was used to stimulate proliferation and inflammatory pathways. Methods: HCT-116 and BJ cells were treated with SsnB (3.125–50 μM) or PMA (1–10 nM) for 12–18 h. Cell viability was assessed using MTT analysis, while apoptosis was evaluated through cleaved caspase-3 staining, terminal deoxynucleotidyl transferase dUTP nick end labeling (TUNEL), and flow cytometry. Proliferation was analyzed through proliferating cell nuclear antigen (PCNA) staining. Toll-like receptor (TLR) signaling, cytokine expression, and sphingolipid levels were measured using immunofluorescence, enzyme-linked immunosorbent assay (ELISA), and mass spectrometry, respectively. Results: SsnB reduced HCT-116 cell viability in a dose- and time-dependent manner with minimal effects on BJ cells. SsnB (25 μM, 12 h) decreased HCT-116 viability 0.6-fold, while PMA (10 nM, 12 h) increased it 2-fold (p < 0.01). No significant change was observed in BJ cells. PCNA fluorescence staining increased 2-fold with PMA and decreased 0.4-fold with SsnB (p < 0.001). PMA upregulated TLR2 and TLR4 mRNA and protein levels, with MyD88, p-ERK, and pNF-κB fluorescence increasing 2.1-, 1.5-, and 1.7-fold, respectively (p < 0.001). PMA elevated TNF-α, IL-1β, and IL-6 levels (p < 0.01). SsnB suppressed PMA-induced effects and promoted apoptosis, increasing cleaved caspase-3 levels by 1.5-fold and TUNEL staining by 1.9-fold (p < 0.01). Flow cytometry confirmed a significant increase in early and late apoptotic cells in the SsnB group. SsnB also increased ceramide (C18, C20, C22, and C24) levels (1.3- to 2.5-fold, p < 0.01) while reducing PMA-induced S1P and C1P increases (p < 0.01). Conclusions: SsnB selectively inhibits proliferation, induces apoptosis, and modulates inflammatory and sphingolipid pathways in colorectal cancer cells, with minimal toxicity to healthy fibroblasts, supporting its potential as a targeted therapeutic agent.

25 October 2024 in Preprints.org
Verified
Preprint
Open access
PDF file
YDYagmur Dilber
Yagmur Dilber
Tuğçe ÇekerTuğçe Çeker
Tuğçe Çeker
AÖAleyna Öztüzün
Aleyna Öztüzün
Bürke ÇIRÇIRLIBürke ÇIRÇIRLI
Bürke ÇIRÇIRLI
EKEsma Kırımlıoğlu
Esma Kırımlıoğlu
Mutay Aydın AslanMutay Aydın Aslan
Mutay Aydın Aslan
Background: The aim of this study was to determine the effect of Sparstolonin B (SsnB) on cell proliferation and apoptosis in human breast cancer (MCF-7) and human ovarian epithelial cancer (OVCAR-3) cell lines in the presence and absence of estradiol hemihydrate (ES). Phosphoinositol-3 kinase (PI3K), phosphorylated protein kinase B alpha (p-AKT), phosphorylated mTOR (mechanistic target of rapamycin) signaling proteins and sphingomyelin/ceramide metabolites were also measured within the scope of the study. Methods: The anti-proliferative effects of SsnB therapy were evaluated over a range of times and concentrations. Cell proliferation was determined by measurement of Proliferating Cell Nuclear Antigen (PCNA). PCNA was quantified by ELISA and cell distribution was assessed by immunofluorescence microscopy. MTT analysis was used to test the vitality of the cells, while LC-MS/MS was used to analyze the amounts of ceramides (CERs), sphingosine-1-phosphate (S1P), and sphingomyelins (SMs). TUNEL labeling was used to assess apoptosis, while immunofluorescence staining and enzyme-linked immunosorbent assay (ELISA) were used to measure the levels of PI3K, p-AKT, and p-mTOR proteins. Results: Sparstolonin B administration significantly decreased cell viability in MCF-7 and OVCAR-3 cells both in the presence and absence of ES, while it did not cause toxicity in healthy human fibroblasts. In comparison to controls, cancer cells treated with SsnB showed a significant drop in the levels of S1P, PI3K, p-AKT, and p-mTOR. In cancer cells cultured with SsnB, a significant increase in intracellular concentrations of C16-C24 CERs and apoptosis was observed. Conclusions: SsnB downregulated the levels of S1P, PI3K, p-AKT, and p-mTOR while reducing cell proliferation and promoting ceramide buildup and apoptosis.

30 January 2025 in Preprints.org
Verified
Preprint
Open access
PDF file
Bürke ÇIRÇIRLIBürke ÇIRÇIRLI
Bürke ÇIRÇIRLI
Çağatay YılmazÇağatay Yılmaz
Çağatay Yılmaz
Tuğçe ÇekerTuğçe Çeker
Tuğçe Çeker
ZBZerrin Barut
Zerrin Barut
EKEsma Kırımlıoğlu
Esma Kırımlıoğlu
Mutay Aydın AslanMutay Aydın Aslan
Mutay Aydın Aslan
Background: Sparstolonin B (SsnB), a natural compound with an-ti-inflammatory and anti-proliferative properties, was investigated for its effects on cell viability, apoptosis, and inflammatory pathways in human colorectal cancer cells (HCT-116) and healthy human fibroblasts (BJ). Phorbol 12-myristate 13-acetate (PMA), a tumor promoter and inflammatory activator, was used to stimulate prolifer-ation and inflammatory pathways. Methods: HCT-116 and BJ cells were treated with SsnB (3.125–50 μM) or PMA (1–10 nM) for 12–18 hours. Cell viability was assessed using viability assays, while apoptosis was evaluated by cleaved caspase-3 staining, Terminal deoxynucleotidyl transferase dUTP nick end labeling (TUNEL), and flow cy-tometry. Proliferation was analyzed through proliferating cell nuclear antigen (PCNA) staining. Toll-like receptor (TLR) signaling, cytokine expression, and sphingolipid lev-els were measured using immunofluorescence, enzyme-linked immunosorbent assay (ELISA), and mass spectrometry, respectively. Results: SsnB significantly reduced HCT-116 cell viability in a dose- and time-dependent manner, with minimal effects on BJ cells. PMA stimulated proliferation, PCNA expression, and inflammatory markers, including TLR2, TLR4, MyD88, phosphorylated extracellular signal-regulated kinase (p-ERK), nuclear factor kappa-light-chain-enhancer of activated B cells (NF-kB), and cytokines TNF-α (tumor necrosis factor-alpha), IL-1β (interleukin-1 beta), IL-6 (inter-leukin-6). SsnB suppressed PMA-induced effects and promoted apoptosis in HCT-116 cells, increasing cleaved caspase-3, TUNEL staining, and ceramide levels while de-creasing S1P (sphingosine-1-phosphate) and C1P (ceramide-1-phosphate). Conclu-sions: SsnB selectively inhibits proliferation, induces apoptosis, and modulates in-flammatory and sphingolipid pathways in colorectal cancer cells, with minimal tox-icity to healthy fibroblasts, supporting its potential as a targeted therapeutic agent.