Marwa Chouikhi

Dr. Marwa Chouikhi

orcid

Research Focus & Metrics

Academic Career Length

4Years (2023-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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15 January 2024 in Genetic Resources
Verified
Journal Article
Open access
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CFCyril Falentin
Cyril Falentin
HHHouria Hadj-Arab
Houria Hadj-Arab
FAFella Aissiou
Fella Aissiou
CBClaudia Bartoli
Claudia Bartoli
Giuseppe BazanGiuseppe Bazan
Giuseppe Bazan
MCMarwa Chouikhi
Marwa Chouikhi
Agriculture faces great challenges to overcome global warming and improve system sustainability, requiring access to novel genetic diversity. So far, wild populations and local landraces remain poorly explored. This is notably the case for the two diploid species, Brassica oleracea L. (CC, 2n=2x=18) and B. rapa L. (AA, 2n=2x=20). In order to explore the genetic diversity in both species, we have collected populations in their centre of origin, the Mediterranean basin, on a large contrasting climatic and soil gradient from northern Europe to southern sub-Saharan regions. In these areas, we also collected 14 populations belonging to five B. oleracea closely related species. Our objective was to ensure the absence of species misidentification at the seedling stage among the populations collected and to describe thereafter their origins. We combined flow cytometry, sequencing of a species-specific chloroplast genomic region, as well as cytogenetic analyses in case of unexpected results for taxonomic verification. Out of the 112 B. oleracea and 154 B. rapa populations collected, 103 and 146, respectively, presented a good germination rate and eighteen populations were misidentified. The most frequent mistake was the confusion of these diploid species with B. napus. Additionally for B. rapa, two autotetraploid populations were observed. Habitats of the collected and confirmed wild populations and landraces are described in this study. The unique plant material described here will serve to investigate the genomic regions involved in adaptation to climate and microbiota within the framework of the H2020 Prima project ‘BrasExplor’.

4 July 2024 in Horticulturae
Verified
Journal Article
Open access
PDF file
MCMarwa Chouikhi
Marwa Chouikhi
ITimen tlili
imen tlili
IHImen Henane
Imen Henane
STSándor Takács
Sándor Takács
HDHussein G. Daood
Hussein G. Daood
TRThouraya R’him
Thouraya R’him
Landraces are considered a crucial component of biodiversity conservation, serving as a reservoir of genetic diversity. Consequently, the collection, cultivation, and detailed characterization of such landraces constitute an inherent aspect of the world’s natural resource heritage. This effort holds promise for the development of elite varieties capable of thriving amidst continuous global climate fluctuations. In this context, we conducted a comprehensive assessment of the main agronomic attributes, physico-chemical properties, and functional quality traits of the major hot pepper landraces adapted to diverse climatic conditions in Tunisia. These landraces include ‘Dhirat’, ‘Semmane’, ‘Beldi’, ‘Nabeul’, ‘Jerid’, ‘Mahdia’, ‘Cayenne’, ‘Kairouan’, and ‘Baklouti’. Most of the pepper landraces exhibited satisfactory yields, ranging from 1163.25 to 1841.67 g plant−1 in ‘Jerid’ and ‘Kairouan’, respectively, indicating robust productivity, especially under prevailing climatic changes and high temperatures during both growing cycles. The levels of antioxidants comprising capsaicinoids, carotenoids, phenolics, and tocopherols, as well as radical scavenging activity, emerged as key discriminating factors among pungent pepper landraces. Irrespective of genotype, capsaicin and dihydrocapsaicin constituted the major capsaicinoids, accounting for 44–91% of the total capsaicinoids content. Total capsaicinoids ranged from 1.81 µg g−1 fw to 193.71 µg g−1 fw, with ‘Baklouti’ and ‘Jerid’ identified as the most pungent landraces. Total carotenoids ranged from 45.94 µg g−1 fw to 174.52 µg g−1 fw, with ‘Semmane’ and ‘Jerid’ exhibiting the highest levels. Considerable variation was observed in β-carotene content, spanning from 3% to 24% of the total carotenoids. α-Tocopherol content ranged from 19.03 µg g−1 fw in ‘Kairouan’ to 30.93 µg g−1 fw in ‘Beldi’, exerting a notable influence on the overall tocopherol content. Conversely, the β- and γ-tocopherol isomers were detected at very low concentrations. The total vitamin C content ranged from 132 mg 100g−1 fw in ‘Mahdia’ to 200 mg 100 g−1 fw in ‘Nabeul’, indicating relatively low genetic variability. However, large variability was detected in total phenolics content, ranging from 168.58 mg GAE kg−1 fw in ‘Beldi’ to 302.98 mg GAE kg−1 fw in ‘Cayenne’. Landraces such as ‘Dhirat’, ‘Nabeul’, ‘Semmane’, ‘Kairouan’, ‘Cayenne’, and ‘Mahdia’ appear suitable for both fresh consumption and processing, owing to their favorable average fruit weight, soluble solids content, and bioactive content. Among the pepper landraces tested, ‘Cayenne’ achieved the highest value of radical scavenging activity in both hydrophilic and lipophilic fractions (RSAHF and RSALF), with variations ranging from 59% to 120% for RSAHF and from 4% to 63% for RSALF. This study aims to preserve and enhance the value of local genetic resources and contribute to identify desirable traits for incorporation into breeding programs to develop high-quality, high-yielding landraces and elite lines.

25 September 2025 in Acta Alimentaria
Verified
Journal Article
Closed access
PDF file
MCMarwa Chouikhi
Marwa Chouikhi
ITI. Tlili
I. Tlili
MBM. Boumendjel
M. Boumendjel
Ilahy RiadhIlahy Riadh
Ilahy Riadh
TRT. R'HIm
T. R'HIm
Pepper is one of the most economically important vegetable crops grown and consumed in Tunisia. Interest in assessing bioactive compounds with antioxidant capacity and potential health benefits in pepper and pepper-based products is increasing. There is limited information undertaking the chemical properties and quality of commercial red-hot pepper pastes (harissa) in Tunisia compared to traditionally prepared varieties. The variability in ascorbic acid, phenolic, and carotenoid contents and antioxidant activity of ten red-hot pepper pastes covering almost the commercial types available in Tunisian hypermarkets were determined and compared with traditionally processed harissa. Ascorbic acid, phenolic, and carotenoid contents and antioxidant activity varied significantly between different red-hot pepper paste. Traditional home-processed harissa outperformed different commercial pepper pastes in terms of bioactive compounds. Ascorbic acid varied from 57.33 to 210.41 mg/100 g FW. The levels of phenolics in different studied red-hot pepper paste varied from 207.34 to 317.24 mg GAE/100 g FW. Significant differences were found also in carotenoids content between different red-hot pepper pastes (coded as CH1-10) ranging from 284.78 mg β-CaE/kg FW in ‘CH2’ to 761.69 mg β-CaE/kg FW in ‘CH8’. ‘CH9’ showed the highest antioxidant activity attaining 2,812 μmol TE/100 g FW. Hydrophilic antioxidant activity was negatively and significantly correlated with ascorbic acid content (r = −0.700; P < 0.05) and carotenoids content (r = −0.674; P < 0.05). This study highlighted the variability in different commercial hot pepper pastes consumed in Tunisia, with respect to quality attributes, and showed the importance of optimising a traditional-like process to create new labels and quality suitable for new consumer demands.

30 May 2024 in Preprints.org
Verified
Preprint
Open access
PDF file
MCMarwa Chouikhi
Marwa Chouikhi
ITimen tlili
imen tlili
IHImen Henane
Imen Henane
STSándor Takács
Sándor Takács
HDHussein G. Daood
Hussein G. Daood
Marcello Salvatore LenucciMarcello Salvatore Lenucci
Marcello Salvatore Lenucci
Landraces are considered a crucial component of biodiversity conservation, serving as a reservoir of genetic diversity. Consequently, the collection, cultivation and detailed characterization of such landraces constitute an inherent aspect of the world’s natural resource heritage. This effort holds promise for the development of elite varieties capable of thriving amidst continuous global climate fluctuations. In this context, we conducted a comprehensive assessment of the main agronomic attributes, physico-chemical properties, and functional quality traits of the major hot pepper landraces adapted to diverse climatic conditions in Tunisia. These landraces include ‘Dhirat’, ‘Semmane’, ‘Beldi’, ‘Nabeul’, ‘Jerid’, ‘Mahdia’, ‘Cayenne’, ‘Kairouan’ and ‘Baklouti’. Most of the pepper landraces exhibited satisfactory yields, ranging from 1163.25 to 1841.67 g plant-1 in ‘Jerid’ and ‘Kairouan’, respectively, indicating robust productivity, especially under prevailing climatic changes and high temperatures. Landraces such as ‘Baklouti’, ‘Beldi’, ‘Nabeul’, ‘Semmane’, ‘Kairouan’ and ‘Mahdia’ appear suitable for both fresh consumption and processing, owing to their favorable average fruit weight and soluble solids content. Functional quality and the levels of antioxidants, as well as radical scavenging activity, emerged as key discriminating factors among pepper landraces. Irrespective of genotype, capsaicin and dihydrocapsaicin constituted the major capsaicinoids, accounting for at least 87% of the total. Total capsaicinoids ranged from 1.81 µg g−1 to 193.71 µg g−1, with ‘Baklouti’ and ‘Jerid’ identified as the most pungent landraces. Total carotenoids ranged from 45.94 µg g−1 to 174.52 µg g−1 with ‘Semmane and ‘Jerid’ exhibiting the highest levels. Considerable variation was observed in β-carotene content, spanning from 3% to 24% of the total carotenoids. α-Tocopherol content ranged from 19.03 µg g-1 fw in ‘Kair-ouan’ to 30.93 µg g-1 fw in ‘Beldi’, exerting a notable influence on the overall tocopherol content. Conversely, the other isomers were detected at very low concentrations. The total vitamin C content ranged from 132 mg 100g-1 fw in ‘Mahdia’ to 200 mg 100 g-1 fw in ‘Nabeul’, indicating relatively low genetic variability. However, large variability was detected in total phenolics content, ranging from 168.58 mg GAE kg-1 fw in ‘Beldi ‘to 302.98 mg GAE kg-1 fw in ‘Cayenne’. Among the pepper landraces tested, ‘Cayenne’ achieved the highest value of radical scavenging activity in both hydrophilic and lipophilic fractions (RSAHF and RSALF), with variations rang-ing from 59% to 120% for RSAHF and from 4% to 64% for RSALF. This study aims to: 1) preserve and enhance the value of local genetic resources, 2) identify desiderable traits for incorporation into breeding programs, and 3) develop high-quality, high-yielding cultivars capable of with-standing climate variations.

17 September 2023 in bioRxiv
Verified
Preprint
Open access
PDF file
CFCyril Falentin
Cyril Falentin
HHHouria Hadj-Arab
Houria Hadj-Arab
FAFella Aissiou
Fella Aissiou
CBClaudia Bartoli-Kautsky
Claudia Bartoli-Kautsky
Giuseppe BazanGiuseppe Bazan
Giuseppe Bazan
ACAnne-Marie Chevre
Anne-Marie Chevre
Agriculture faces great challenges to overcome global warming and to improve system sustainability, requiring access to novel genetic diversity. So far, wild populations and local landraces remain poorly explored. This is notably the case for the two diploid species, Brassica oleracea L. (CC, 2n=2x=18) and B. rapa L. (AA, 2n=2x=20). In order to explore genetic diversity in both species, we have collected numerous populations in their center of origin, the Mediterranean basin, on a large contrasting climatic and soil gradient from northern Europe to southern sub-Saharan regions. In these areas, we also collected 14 populations belonging to five B. oleracea closely related species. Before further genetic and agronomic investigations, we controlled the absence of species misidentification using flow cytometry, sequencing of species specific chloroplast genomic region, as well as cytogenetic analyses in case of unexpected results. Looking at the 102 B. oleracea and 146 B. rapa populations showing a good germination among the 112 and 154 populations collected, seventeen populations were misidentified. The most frequent mistake was a confusion of these diploid species with B. napus . Additionally for B. rapa , 2 autotetraploid populations were observed. Habitats of the collected wild populations and landraces are described in our work. This provides a unique plant material characterization that will pave the way for further analyses investigating the genomic regions involved in climatic and microbiota adaptation. This research is supported by the H2020 Prima project ‘BrasExplor’.

25 August 2026 in Turkish Journal of Agriculture - Food Science and Technology
Verified
Journal Article
Open access
PDF file
MCMarwa Chouikhi
Marwa Chouikhi
Ilahy RiadhIlahy Riadh
Ilahy Riadh
ITimen tlili
imen tlili
TRThouraya R’HIm
Thouraya R’HIm
Local pepper (Capsicum annuum L.) landraces represent an important source of genetic diversity, particularly for traits related to seed germination and early seedling development. This study aimed to evaluate emergence behavior and cotyledon morphological traits in nine Tunisian hot pepper landraces under controlled conditions. Emergence parameters, including days to emerge, emergence percentage, and mean emergence time, were recorded, while cotyledon colour, shape, length, and width were assessed at the cotyledon stage. Significant differences were observed among landraces in days to emergence and mean emergence time, indicating variation in germination kinetics and early seed vigor. Cayenne, D’hirat, Baklouti, and Kairouan exhibited faster and more synchronized emergence, whereas Semmene, Beldi, and Nabeul showed delayed emergence. Despite these differences, germination percentage remained high across all landraces (95-100%), reflecting good seed viability. Cotyledon colour and shape were uniform, with all landraces displaying green, lanceolate cotyledons; however, cotyledon length and width varied significantly, highlighting genetic diversity in early seedling morphology. These results demonstrate that germination dynamics and cotyledon traits are effective indicators of early vigor and morphological variation among local pepper landraces, providing useful criteria for germplasm characterization, conservation, and breeding programs.