In this study, we report the interaction between an arbuscular mycorrhizal fungus, Septoglomus constrictum, and tomato plants under heat stress. For the first time, this interaction was studied by Illumina RNA-seq, followed by a comprehensive bioinformatic analysis that investigated root and leaf tissue samples. The genome-wide transcriptional profiling displayed fewer transcriptomic changes in the root under heat-stress conditions caused by S. constrictum. The top 50 DEGs suggested significant changes in the expression of genes encoding heat-shock proteins, transporter proteins, and genes of phytohormone metabolism involving jasmonic acid signalling. S. constrictum induced the upregulation of genes associated with pathways such as ‘drought-responsive’ and the ‘development of root hair’ in the root, as well as ‘glycolipid desaturation’, ‘intracellular auxin transport’, and ‘ethylene biosynthesis’ in the leaf. The pathways ‘biotin biosynthesis’ and ‘threonine degradation’ were found in both investigated tissue types. Expression analysis of transcription factors showed 2 and 11 upregulated transcription factors in heat-stressed root and leaf tissues, respectively. However, we did not find shared transcription factors. Heat-stressed arbuscular mycorrhizal plants suffered less oxidative stress when exposed to high temperatures. Colorimetric tests demonstrated less accumulation of H₂O₂ and MDA in heat-stressed mycorrhizal plants. This phenomenon was accompanied by the higher expression of six stress genes that encode peroxidases, glutathione S-transferase and ubiquitin carboxyl-terminal hydrolase in roots and leaves. Our findings provide a new perspective on elucidating the functional metabolic processes of tomato plants under mycorrhizal-heat stressed conditions.

The endogenous stress metabolite β-aminobutyric acid (BABA) primes plants for enhanced resistance against abiotic and biotic stress by activating a complex phytohormone signaling network that includes abscisic acid (ABA), jasmonic acid (JA), salicylic acid (SA), and ethylene (ET). In this study, through stringent filtering, we identify 14 master regulatory transcription factors (TFs) from the DOF, AHL, and ERF families that potentially regulate the biosynthesis and signaling of these phytohormones. Transcriptional analysis of BABA-treated Arabidopsis thaliana and Hordeum vulgare suggests that DOF family TFs play a crucial role in stress response regulation in both species. BABA treatment in A. thaliana upregulates the TFs MNB1A and PBF and enhances the expression of the genes ICS1, EDS5, and WIN3 in the SA biosynthesis pathway, potentially boosting NPR1 and PR1 in the SA signaling pathway. Conversely, in H. vulgare, the BABA-induced upregulation of TF DOF5.8 may negatively regulate SA biosynthesis by downregulating ICS1, EDS5, and PR1. Additionally, in A. thaliana, BABA triggers the expression of TF PBF, which may result in the decreased expression of MYC2, a key gene in JA signaling. In contrast, H. vulgare exhibits increased expression of ERF2 TF, which could positively regulate the JA biosynthesis genes LOX and Tify9, along with the COI1 and JAZ genes involved in the JA signaling pathway. These findings offer new perspectives on the transcriptional regulation of phytohormones during plant priming.

Floral ontogeny in soybean (Glycine max) is governed by multilayered regulatory hierarchies that integrate phytohormonal cues with precisely choreographed gene-expression programs. Yet, the transcriptomic architecture underpinning this continuum remains only partially resolved. Here, we generated a strand-specific, high-depth temporal transcriptome atlas of soybean inflorescences spanning four morphologically defined stadiums (Stadium 0–Stadium 3). We detected transcriptional activity for 60,889 loci; pairwise stadium contrasts revealed 4000–7000 differentially expressed genes, with the most extensive reprogramming coinciding with the onset of anthesis (Stadium 2). Unsupervised clustering delineated ~600 genes peaking at the pre-anthesis phase (Stadium 1), a cohort enriched for transcriptional regulators and floral organ-identity determinants. Stadium-resolved gene-set enrichment and KEGG mapping uncovered dynamic modulation of canonical hormone-signaling pathways—including auxin, cytokinin, gibberellin, abscisic acid, ethylene, jasmonate, and salicylate circuits—reflecting shifting developmental priorities. Forty-five MADS-box transcription factor genes were expressed; notably, JOINTLESS was strongly induced at anthesis, while the root-predominant factor GmNMH7 exhibited unexpected floral expression, implicating a hitherto unappreciated role in reproductive development. Quantitative RT-PCR of representative loci corroborated RNA-seq measurements. This high-resolution atlas refines our understanding of the hormonal and genetic circuitry of soybean floral morphogenesis, furnishing molecular targets for engineering flowering time and inflorescence architecture under fluctuating environmental conditions.

Plant-derived biostimulants represent an innovative approach to enhancing crop productivity, resilience, and quality within sustainable agricultural systems by improving nutrient uptake, stress tolerance, and plant defense mechanisms while reducing reliance on synthetic inputs. However, their effectiveness is often limited by poor stability and low bioavailability. Recent advances in nanotechnology, particularly liposomal formulations, address these limitations by enhancing the stability, solubility, and delivery efficiency of bioactive plant compounds. Liposomes facilitate the penetration and systemic transport of active ingredients within plant tissues and enable controlled release at the target site, thereby increasing biostimulant efficacy. This review summarizes current knowledge on plant-derived biostimulants, their classification, nano-formulation, molecular mechanisms, and roles in mitigating abiotic and biotic stress. Special emphasis is placed on liposome-based formulations, including supercritical CO₂ extracts and nano-liposomal delivery systems, with examples such as garlic extract and the EliceVakcina^® complex. Finally, the potential of liposomal technologies in integrated crop protection and sustainable agriculture is discussed.

Fusarium infections in Pisum sativum L. crops present a major constraint to cultivation, leading to substantial yield losses. However, effective disease management strategies, particularly the implementation of biological control methods, offer promising approaches for mitigating infection severity and limiting pathogen spread. In P. sativum cultivation, pathogen control is particularly challenging due to the limited penetration of pesticides into the leaves. This is attributed to the dense crystalline plate structure within the leaf cuticle, which acts as a barrier, reducing the efficacy of conventional chemical treatments. Therefore, optimizing the formulation of biopesticides and plant conditioning agents is essential to improve the absorption and bioavailability of active ingredients, ensuring more effective disease management in P. sativum cultivation. This study examined the exogenous effects of garlic extracts in different formulations, including EliceVakcina (liposomal formulation), Garlic-lipo (liposomal formulation), and Garlic-oil (oil-based formulation), which contained high concentrations of abscisic acid (ABA) at 6.3, 81, and 80.4 µg g⁻¹, respectively. Transcriptomic profiling, including the identification of Differentially expressed genes (DEGs) and KEGG pathway analysis of EliceVakcina-treated field samples, revealed a significant upregulation of stress- and defence-related genes, as well as pathways associated with thiamine metabolism and ABA signalling. Notably, key defence genes, including pathogenesis-related (PR1, PR2, PR4, PR5) and SnRK2, were overexpressed, indicating an enhanced stress response. HPLC-DAD analytical investigations confirmed the activation of the thiamine biosynthesis pathway, demonstrating a 14.3% increase in vitamin B1 content. Furthermore, the absence of Fusarium infection in the treated small-plot field cultures suggests that the tested garlic extracts formulation functions as a promising preventive biostimulant against plant fungal diseases.

The transition to flowering in Arabidopsis thaliana is governed by complex transcriptional regulatory networks, in which promoter-associated cis-regulatory elements integrate both developmental and environmental cues. To investigate these regulatory interactions, we analyzed promoter motifs of 18 flowering-related genes using curated motif resources, including the Eukaryotic Promoter Database (EPD) and JASPAR, applying stringent statistical thresholds. Transcription factors (TFs), which were predicted to bind across all examined promoters, were designated as putative master regulators, resulting in the identification of 36 candidates, predominantly belonging to the MADS-box, DOF, and IDD families. Positional analyses revealed both proximal and distal binding sites, including a notable motif at −1024 in PISTILLATA and at +466 in SEPALLATA3, potentially indicative of autoregulatory control. Comparative analysis further identified 96 gene-specific associations, reflecting a balance between shared and specialized regulatory mechanisms. Treatment with β-aminobutyric acid (BABA), which has a flowering delaying effect, repressed SQUAMOSA and increased DOF-type TFs, indicating a chromatin-associated reprogramming process, which may coordinate the transcriptional suppression of flowering activators. These findings refine current models of floral regulatory networks and provide testable hypotheses regarding autoregulatory and cross-regulatory circuits in the control of flower development.