Candida auris, an emerging multidrug-resistant fungal pathogen, poses significant challenges in healthcare settings due to its high misidentification rate and resilience to treatments. Despite advancements in diagnostic tools, a gap remains in rapid, cost-effective identification methods that can differentiate C. auris from other Candida species, particularly on non-standard culture media. We used Raman spectroscopy to characterize C. auris grown on modified Dixon’s agar (mDixon) and differentiated it from Candida albicans and Candida parapsilosis. Key Raman spectral markers at 1171 cm−1 and 1452 cm−1, linked to mannan and β-glucan composition, differentiated C. auris into two subgroups, A and B. Despite the spectral similarities of groups A and B with C. albicans and C. parapsilosis, respectively, all Candida species were distinguishable through principal component analysis (PCA). Additionally, this study is the first to demonstrate the distinct spectral signature of mDixon agar, achieved through spatially offset Raman spectroscopy (SORS), which enables accurate discrimination between the culture medium and fungal samples. The observed inter-individual variability within C. auris, coupled with the spectral overlap between C. auris subgroups and other Candida species, highlights a major challenge in differentiating closely related fungi due to their similar molecular composition. Enhancements in spectral resolution and further fluorescence minimization from the culture medium are needed to reliably detect the subtle biochemical differences within these species. Despite these challenges, the results underscore the potential of Raman spectroscopy as a real-time, non-destructive, and complementary tool for fungal pathogen identification.
The inherent complexity of the Raman spectra of biomedical samples reflects the intricate molecular composition and intermolecular interactions of these diverse systems. Unraveling the complexities of biological Raman spectra is essential for bioscience and bioengineering research because it provides insight into cellular processes, disease states, and drug interactions. For the effective analysis of such complex data, robust and cutting-edge software is required that provides sophisticated algorithms for data preprocessing, thereby enhancing the signal-to-noise ratio and revealing hidden spectral information. In addition, novel applications of this type may include machine learning algorithms for automated clustering analysis, enabling the identification of biomolecules and their conformational changes in diverse biological specimens. We present a Python 3 package built around popular scientific Python libraries that aims to provide Raman spectroscopists with user-friendly programming tools for the analysis of complex biomedical Raman data.
Urban air pollution remains a critical public health issue, especially in densely populated cities where pedestrians experience direct exposure to traffic-related and environmental emissions. This study develops and tests a pollution-aware pedestrian routing framework for Thessaloniki, Greece, designed to minimize environmental exposure while maintaining route efficiency. The framework combines high-resolution air-quality data and computational techniques to represent pollution patterns at pedestrian scale. Air-quality is expressed as a continuous European Air Quality Index (EAQI) and is embedded in a network-based routing engine (OSRM) that balances exposure and distance through a weighted optimization function. Using 3000 randomly sampled origin-destination pairs, exposure-aware routes are compared with conventional shortest-distance paths across short, medium, and long walking trips. Results show that exposure-aware routes reduce cumulative AQI exposure by an average of 4% with only 3% distance increase, while maintaining stable scaling across all route classes. Exposure benefits exceeding 5% are observed for approximately 8% of medium-length routes and 24% of long routes, while short routes present minimal or no detours, but lower exposure benefits. These findings confirm that integrating high-resolution environmental data into pedestrian navigation systems is both feasible and operationally effective, providing a practical foundation for future real-time, pollution-aware mobility services in smart cities.