Shin-Ru Shih

Dr. Shin-Ru Shih


Research Focus & Metrics

Academic Career Length

37Years (1990-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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23 September 1999 in New England Journal of Medicine
Verified
Journal Article
Closed access
PDF file
MHMonto Ho
Monto Ho
ECEng-Rin Chen
Eng-Rin Chen
KHKwo-Hsiung Hsu
Kwo-Hsiung Hsu
STShiing-Jer Twu
Shiing-Jer Twu
Kow-Tong ChenKow-Tong Chen
Kow-Tong Chen
SSShin-Ru Shih
Shin-Ru Shih
Enteroviruses can cause outbreaks of hand-foot-and-mouth disease (characterized by vesicular lesions on the hands, feet, and oral mucosa) or herpangina, usually without life-threatening manifestations. In 1998 an epidemic of enterovirus 71 infection caused hand-foot-and-mouth disease and herpangina in thousands of people in Taiwan, some of whom died.

1 August 2020 in Biomedical Journal
Verified
Journal Article
Open access
YLYen-Chin Liu
Yen-Chin Liu
RKRei-Lin Kuo
Rei-Lin Kuo
SSShin-Ru Shih
Shin-Ru Shih
The novel human coronavirus disease COVID-19 has become the fifth documented pandemic since the 1918 flu pandemic. COVID-19 was first reported in Wuhan, China, and subsequently spread worldwide. The coronavirus was officially named severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) by the International Committee on Taxonomy of Viruses based on phylogenetic analysis. SARS-CoV-2 is believed to be a spillover of an animal coronavirus and later adapted the ability of human-to-human transmission. Because the virus is highly contagious, it rapidly spreads and continuously evolves in the human population. In this review article, we discuss the basic properties, potential origin, and evolution of the novel human coronavirus. These factors may be critical for studies of pathogenicity, antiviral designs, and vaccine development against the virus.

1 November 1999 in The Lancet
Verified
Journal Article
Closed access
LCLuan-Yin Chang
Luan-Yin Chang
TLTzou-Yien Lin
Tzou-Yien Lin
KHKuang-Hung Hsu
Kuang-Hung Hsu
YHYhu-Chering Huang
Yhu-Chering Huang
KLKuang-Lin Lin
Kuang-Lin Lin
CLChin-Yun Lee
Chin-Yun Lee

1 September 2006 in Emerging Infectious Diseases
Verified
Journal Article
Open access
GCGuang-Wu Chen
Guang-Wu Chen
SCShih-Cheng Chang
Shih-Cheng Chang
Chee Keng MOKChee Keng MOK
Chee Keng MOK
YLYu-Luan Lo
Yu-Luan Lo
YKYu-Nong Kung
Yu-Nong Kung
SSShin-Ru Shih
Shin-Ru Shih
Position-specific entropy profiles created from scanning 306 human and 95 avian influenza A viral genomes showed that 228 of 4,591 amino acid residues yielded significant differences between these 2 viruses. We subsequently used 15,785 protein sequences from the National Center for Biotechnology Information (NCBI) to assess the robustness of these signatures and obtained 52 "species-associated" positions. Specific mutations on those points may enable an avian influenza virus to become a human virus. Many of these signatures are found in NP, PA, and PB2 genes (viral ribonucleoproteins [RNPs]) and are mostly located in the functional domains related to RNP-RNP interactions that are important for viral replication. Upon inspecting 21 human-isolated avian influenza viral genomes from NCBI, we found 19 that exhibited >1 species-associated residue changes; 7 of them contained >2 substitutions. Histograms based on pairwise sequence comparison showed that NP disjointed most between human and avian influenza viruses, followed by PA and PB2.

1 June 2002 in Pediatrics
Verified
Journal Article
Closed access
PDF file
LCLuan-Yin Chang
Luan-Yin Chang
CKChwan-Chuen King
Chwan-Chuen King
KHKuang-Hung Hsu
Kuang-Hung Hsu
HNHsiao-Chen Ning
Hsiao-Chen Ning
KTKuo-Chien Tsao
Kuo-Chien Tsao
TLTzou-Yien Lin
Tzou-Yien Lin
Objective. In 1998, an enterovirus 71 (EV71) epidemic in Taiwan was associated with hand, foot, and mouth disease (HFMD)/herpangina and involved 78 fatal cases. We measured EV71 seroprevalence rates before and after the epidemic and investigated risk factors associated with EV71 infection and illness. Methods. Neutralizing antibodies to EV71 were assayed for 539 people before the epidemic and 4619 people of similar ages after the epidemic. Questionnaires, which were completed during household interviews after the epidemic, solicited demographic variables, exposure history, and clinical manifestations. Results. A total of 129 106 cases of HFMD were reported during the epidemic. Age-specific pre-epidemic EV71 seroprevalence rates were inversely related to age-specific periepidemic mortality rates (r = −0.82) or severe case rates (r = −0.93). Higher postepidemic EV71 seropositive rates among children who were younger than 3 years positively correlated with higher mortality rates in different areas (r = 0.88). After the epidemic, 51 (56%) of 91 younger siblings of elder siblings who were EV71-seropositive were EV71-seropositive; otherwise, 2.2% (4 of 186) of younger siblings were EV71-seropositive (matched odds ratio [OR]: 10; 95% confidence interval [CI]: 3.4–29). Stepwise multiple logistic regression revealed other factors associated with EV71 infection to be older age (adjusted OR: 2.5; 95% CI: 1.9–3.4), attendance at kindergartens/child care centers (adjusted OR: 1.8; 95% CI: 1.3–2.5), contact with HFMD/herpangina (adjusted OR: 1.6; 95% CI: 1.2–2.1), greater number of children in a family (adjusted OR: 1.4; 95% CI: 1.1–1.7), and rural residence (adjusted OR: 1.4; 95% CI: 1.2–1.6). Twenty-nine percent of preschool children who were infected with EV71 developed HFMD/herpangina. Younger age and contact with HFMD/herpangina were significant factors for the development of EV71-related HFMD/herpangina in these children. Conclusions. An increased incidence of EV71 infection in young children occurred more often in geographic areas with increased mortality rates. Intrafamilial and kindergarten transmissions among preschool children were major modes of disease transmission during the widespread EV71 epidemic in Taiwan in 1998.

28 November 2016 in Nucleic Acids Research
Verified
Journal Article
Open access
YKYu-An Kung
Yu-An Kung
CHChuan-Tien Hung
Chuan-Tien Hung
KCKun-Yi Chien
Kun-Yi Chien
SSShin-Ru Shih
Shin-Ru Shih
Cells and viruses can utilize internal ribosome entry sites (IRES) to drive translation when cap-dependent translation is inhibited by stress or viral factors. IRES trans-acting factors (ITAFs) are known to participate in such cap-independent translation, but there are gaps in the understanding as to how ITAFs, particularly negative ITAFs, regulate IRES-driven translation. This study found that Lys109, Lys121 and Lys122 represent critical ubiquitination sites for far upstream element-binding protein 2 (KHSRP, also known as KH-type splicing regulatory protein or FBP2), a negative ITAF. Mutations at these sites subsequently reduced KHSRP ubiquitination and abolished its inhibitory effect on IRES-driven translation. We further found that interaction between the Kelch domain of Kelch-like protein 12 (KLHL12) and the C-terminal domain of KHSRP contributed to KHSRP ubiquitination, leading to downregulation of enterovirus IRES-mediated translation in infected cells and increased competition against other positive ITAFs. Together, these results show that ubiquitination can exert control over IRES-driven translation via modification of ITAFs, and to the best of our knowledge, this is the first description of such a regulatory mechanism for IRES-dependent translation.