Sonia Ilieva

Prof. Sonia Ilieva

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Research Focus & Metrics

Academic Career Length

29Years (1998-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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24 October 2021 in Biomolecules
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DCDiana Cheshmedzhieva
Diana Cheshmedzhieva
SISonia Ilieva
Sonia Ilieva
Eugene PermyakovEugene Permyakov
Eugene Permyakov
Eugene PermyakovEugene Permyakov
Eugene Permyakov
Todor DoudevTodor Doudev
Todor Doudev
The extracellular calcium-sensing receptor (CaSR) controls vital bone cell functions such as cell growth, differentiation and apoptosis. The binding of the native agonist (Ca2+) to CaSR activates the receptor, which undergoes structural changes that trigger a cascade of events along the cellular signaling pathways. Strontium (in the form of soluble salts) has been found to also be a CaSR agonist. The activation of the receptor by Sr2+ is considered to be the major mechanism through which strontium exerts its anti-osteoporosis effect, mostly in postmenopausal women. Strontium-activated CaSR initiates a series of signal transduction events resulting in both osteoclast apoptosis and osteoblast differentiation, thus strengthening the bone tissue. The intimate mechanism of Sr2+ activation of CaSR is still enigmatic. Herewith, by employing a combination of density functional theory (DFT) calculations and polarizable continuum model (PCM) computations, we have found that the Ca2+ binding sites 1, 3, and 4 in the activated CaSR, although possessing a different number and type of protein ligands, overall structure and charge state, are all selective for Ca2+ over Sr2+. The three binding sites, regardless of their structural differences, exhibit almost equal metal selectivity if they are flexible and have no geometrical constraints on the incoming Sr2+. In contrast to Ca2+ and Sr2+, Mg2+ constructs, when allowed to fully relax during the optimization process, adopt their stringent six-coordinated octahedral structure at the expense of detaching a one-backbone carbonyl ligand and shifting it to the second coordination layer of the metal. The binding of Mg2+ and Sr2+ to a rigid/inflexible calcium-designed binding pocket requires an additional energy penalty for the binding ion; however, the price for doing so (to be paid by Sr2+) is much less than that of Mg2+. The results obtained delineate the key factors controlling the competition between metal cations for the receptor and shed light on some aspects of strontium’s therapeutic effects.

22 September 2011 in Physical Chemistry Chemical Physics
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DCDiana Cheshmedzhieva
Diana Cheshmedzhieva
PIPlamena Ivanova
Plamena Ivanova
SSStanimir Stoyanov
Stanimir Stoyanov
DTDonka Tasheva
Donka Tasheva
MDMashenka Dimitrova
Mashenka Dimitrova
SISonia Ilieva
Sonia Ilieva
Absorption and fluorescence spectra in acetonitrile for a series of substituted aryl hydrazones of N-hexyl-1,8-naphthalimide are studied with the aim of potential application of the compounds for enzyme activity localization. The influence of the substituents on the spectral characteristics has been evaluated. The absorption and fluorescence energies of substituted aryl-1,8-naphthalimide hydrazones have been calculated with the PCM TDDFT formalism. The M06 and PBE0 functionals, combined with the 6-31+G(d) atomic basis set, have been found to accurately model the excited state properties of the present set of solvated fluorophores. Absorption and fluorescence spectral characteristics have been rationalized in terms of experimental and theoretical electronic indices in order to assess their predictive abilities for application in designing analogues with good emitting properties. An excellent linear dependence is established between the experimental fluorescence and Hammett σ+ p substituent constants and on the other hand σ+ p constants correlate with the theoretically calculated values for the electrostatic potential at nuclei (EPN). A model for predicting the fluorescence properties of substituted hydrazones by means of EPN is drawn, including the polysubstituted derivatives, where Hammett constants are not applicable.

19 July 2002 in The Journal of Organic Chemistry
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SISonia Ilieva
Sonia Ilieva
BHBoriana Hadjieva
Boriana Hadjieva
BGBoris Galabov
Boris Galabov

4 April 2003 in The Journal of Organic Chemistry
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Journal Article
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SISonia Ilieva
Sonia Ilieva
BGBoris Galabov
Boris Galabov
DMDjamaladdin G. Musaev
Djamaladdin G. Musaev
KMKeiji Morokuma
Keiji Morokuma

4 June 2013 in The Journal of Organic Chemistry
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Journal Article
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SISonia Ilieva
Sonia Ilieva
DNDidi Nalbantova
Didi Nalbantova
BHBoriana Hadjieva
Boriana Hadjieva
BGBoris Galabov
Boris Galabov

4 July 2019 in Physical Chemistry Chemical Physics
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SISonia Ilieva
Sonia Ilieva
DCDiana Cheshmedzhieva
Diana Cheshmedzhieva
Todor DoudevTodor Doudev
Todor Doudev
The secondary structure of proteins is of prime importance to their proper functioning and protein misfolding may cause serious disorders in the human body. Here, the electric field influence on the conformational stability of model alpha helical peptides is studied by employing density functional theory calculations combined with continuum dielectric method computations. Our results show that the basic parameters of the electric field – its strength and directionality – are determinative for the alpha helix stability. An electric field strength of 0.005 a.u. (2.5 V nm−1) applied along the X coordinate axis (the long axis of the helix) in the direction of the μx component of the molecular dipole moment does affect the peptide conformation, destroys the helix, and leads to the formation of a cyclic-peptide-like structure. Interestingly, the process of denaturation can be reversible when the electric field is switched-off. The reversibility of the process of the electric field induced disruption of the peptide secondary structure suggests a possible mechanism for the healing of misfolded proteins.