John Garrett

Dr. John Garrett

orcid

Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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15 September 2021 in Nature Medicine
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IDIttai Dayan
Ittai Dayan
HRHolger Roth
Holger Roth
AZAoxiao Zhong
Aoxiao Zhong
AHAhmed Harouni
Ahmed Harouni
AGAmilcare Gentili
Amilcare Gentili
QLQuanzheng Li
Quanzheng Li

5 December 2022 in Nature Communications
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Journal Article
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SPSarthak Pati
Sarthak Pati
Ujjwal BaidUjjwal Baid
Ujjwal Baid
BEBrandon Edwards
Brandon Edwards
MSMicah Sheller
Micah Sheller
SWShih-Han Wang
Shih-Han Wang
Spyridon BakasSpyridon Bakas
Spyridon Bakas
Although machine learning (ML) has shown promise across disciplines, out-of-sample generalizability is concerning. This is currently addressed by sharing multi-site data, but such centralization is challenging/infeasible to scale due to various limitations. Federated ML (FL) provides an alternative paradigm for accurate and generalizable ML, by only sharing numerical model updates. Here we present the largest FL study to-date, involving data from 71 sites across 6 continents, to generate an automatic tumor boundary detector for the rare disease of glioblastoma, reporting the largest such dataset in the literature (n = 6, 314). We demonstrate a 33% delineation improvement for the surgically targetable tumor, and 23% for the complete tumor extent, over a publicly trained model. We anticipate our study to: 1) enable more healthcare studies informed by large diverse data, ensuring meaningful results for rare diseases and underrepresented populations, 2) facilitate further analyses for glioblastoma by releasing our consensus model, and 3) demonstrate the FL effectiveness at such scale and task-complexity as a paradigm shift for multi-site collaborations, alleviating the need for data-sharing.

1 June 2023 in Radiology
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Journal Article
Closed access
PPPerry J. Pickhardt
Perry J. Pickhardt
RSRonald M. Summers
Ronald M. Summers
JGJohn Garrett
John Garrett
AKArun Krishnaraj
Arun Krishnaraj
SASheela Agarwal
Sheela Agarwal
GNGregory N. Nicola
Gregory N. Nicola
Radiologic tests often contain rich imaging data not relevant to the clinical indication. Opportunistic screening refers to the practice of systematically leveraging these incidental imaging findings. Although opportunistic screening can apply to imaging modalities such as conventional radiography, US, and MRI, most attention to date has focused on body CT by using artificial intelligence (AI)-assisted methods. Body CT represents an ideal high-volume modality whereby a quantitative assessment of tissue composition (eg, bone, muscle, fat, and vascular calcium) can provide valuable risk stratification and help detect unsuspected presymptomatic disease. The emergence of "explainable" AI algorithms that fully automate these measurements could eventually lead to their routine clinical use. Potential barriers to widespread implementation of opportunistic CT screening include the need for buy-in from radiologists, referring providers, and patients. Standardization of acquiring and reporting measures is needed, in addition to expanded normative data according to age, sex, and race and ethnicity. Regulatory and reimbursement hurdles are not insurmountable but pose substantial challenges to commercialization and clinical use. Through demonstration of improved population health outcomes and cost-effectiveness, these opportunistic CT-based measures should be attractive to both payers and health care systems as value-based reimbursement models mature. If highly successful, opportunistic screening could eventually justify a practice of standalone "intended" CT screening.

1 February 2021 in Radiology
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RZRan Zhang
Ran Zhang
XTXin Tie
Xin Tie
ZQZhihua Qi
Zhihua Qi
NBNicholas B. Bevins
Nicholas B. Bevins
CZChengzhu Zhang
Chengzhu Zhang
GCGuang-Hong Chen
Guang-Hong Chen
Background Radiologists are proficient in differentiating between chest x-ray radiographs (CXRs) with and without symptoms of pneumonia, but have found it more challenging to differentiate CXRs wit...

11 June 2021 in American Journal of Neuroradiology
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AVA.F. Voter
A.F. Voter
MLM.E. Larson
M.E. Larson
JGJohn Garrett
John Garrett
JJJohn-Paul J.
John-Paul J.
BACKGROUND AND PURPOSE: Artificial intelligence decision support systems are a rapidly growing class of tools to help manage ever-increasing imaging volumes. The aim of this study was to evaluate the performance of an artificial intelligence decision support system, Aidoc, for the detection of cervical spinal fractures on noncontrast cervical spine CT scans and to conduct a failure mode analysis to identify areas of poor performance. MATERIALS AND METHODS: This retrospective study included 1904 emergent noncontrast cervical spine CT scans of adult patients (60 [SD, 22] years, 50.3% men). The presence of cervical spinal fracture was determined by Aidoc and an attending neuroradiologist; discrepancies were independently adjudicated. Algorithm performance was assessed by calculation of the diagnostic accuracy, and a failure mode analysis was performed. RESULTS: Aidoc and the neuroradiologist9s interpretation were concordant in 91.5% of cases. Aidoc correctly identified 67 of 122 fractures (54.9%) with 106 false-positive flagged studies. Diagnostic performance was calculated as the following: sensitivity, 54.9% (95% CI, 45.7%–63.9%); specificity, 94.1% (95% CI, 92.9%–95.1%); positive predictive value, 38.7% (95% CI, 33.1%–44.7%); and negative predictive value, 96.8% (95% CI, 96.2%–97.4%). Worsened performance was observed in the detection of chronic fractures; differences in diagnostic performance were not altered by study indication or patient characteristics. CONCLUSIONS: We observed poor diagnostic accuracy of an artificial intelligence decision support system for the detection of cervical spine fractures. Many similar algorithms have also received little or no external validation, and this study raises concerns about their generalizability, utility, and rapid pace of deployment. Further rigorous evaluations are needed to understand the weaknesses of these tools before widespread implementation.

23 June 2014 in Medical Physics
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Journal Article
Closed access
KLKe Li
Ke Li
JGJohn Garrett
John Garrett
YGYongshuai Ge
Yongshuai Ge
GCGuang-Hong Chen
Guang-Hong Chen