Poopalasingam Sivakumar

Prof. Poopalasingam Sivakumar

Southern Illinois University Carbondale
orcid

Research Focus & Metrics

Academic Career Length

20Years (2007-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
18 November 2021 in ACS Applied Materials & Interfaces
Verified
Journal Article
Closed access
TSThushani De Silva
Thushani De Silva
CDCole Damery
Cole Damery
RARana Alkhaldi
Rana Alkhaldi
RKRobinson Karunanithy
Robinson Karunanithy
DGDinuka H. Gallaba
Dinuka H. Gallaba
STSaikat Talapatra
Saikat Talapatra

1 January 2023 in Computational and Structural Biotechnology Journal
Verified
Journal Article
Open access
SJSandhya K. Jayasekara
Sandhya K. Jayasekara
HJHriday Dhar Joni
Hriday Dhar Joni
BJBhagya Jayantha
Bhagya Jayantha
LDLakshika Dissanayake
Lakshika Dissanayake
CMChristopher Mandrell
Christopher Mandrell
LJLahiru N. Jayakody
Lahiru N. Jayakody
Polyethylene terephthalate (PET) is the largest produced polyester globally, and less than 30% of all the PET produced globally (∼6 billion pounds annually) is currently recycled into lower-quality products. The major drawbacks in current recycling methods (mechanical and chemical), have inspired the exploration of potentially efficient and sustainable PET depolymerization using biological approaches. Researchers have discovered efficient PET hydrolyzing enzymes in the plastisphere and have demonstrated the selective degradation of PET to original monomers thus enabling biological recycling or upcycling. However, several significant hurdles such as the less efficiency of the hydrolytic reaction, low thermostability of the enzymes, and the inability of the enzyme to depolymerize crystalline PET must be addressed in order to establish techno-economically feasible commercial-scale biological PET recycling or upcycling processes. Researchers leverage a synthetic biology-based design; build, test, and learn (DBTL) methodology to develop commercially applicable efficient PET hydrolyzing enzymes through 1) high-throughput metagenomic and proteomic approaches to discover new PET hydrolyzing enzymes with superior properties: and, 2) enzyme engineering approaches to modify and optimize PET hydrolyzing properties. Recently, in-silico platforms including molecular mechanics and machine learning concepts are emerging as innovative tools for the development of more efficient and effective PET recycling through the exploration of novel mutations in PET hydrolyzing enzymes. In-silico-guided PET hydrolyzing enzyme engineering with DBTL cycles enables the rapid development of efficient variants of enzymes over tedious conventional enzyme engineering methods such as random or directed evolution. This review highlights the potential of in-silico-guided PET degrading enzyme engineering to create more efficient variants, including Ideonella sakaiensis PETase (IsPETase) and leaf-branch compost cutinases (LCC). Furthermore, future research prospects are discussed to enable a sustainable circular economy through the bioconversion of PET to original or high-value platform chemicals.

17 November 2008 in Physical Review A
Verified
Journal Article
Closed access
PDF file
CMC. P. McRaven
C. P. McRaven
Poopalasingam SivakumarPoopalasingam Sivakumar
Poopalasingam Sivakumar
NSN. E. Shafer-Ray
N. E. Shafer-Ray
We have measured the hyperfine energy level structure of the X1 and A states of Pb207F19 and found it to be in disagreement with previous predictions. Specifically, we find our data are reproduced by the hyperfine parameters A⊥,X1=7200±150MHz, A∥,X1=10300±800MHz, A⊥,A=1200±300MHz, and A∥,A=3000±2500MHz. The hyperfine structure may also be reproduced with A⊥,X1=−7200±150MHz and A⊥,A=−1200±300MHz. These negative hyperfine constants would, however, require a reinterpretation of the parity assignments of both the X1 and A states of the PbF molecule.

12 March 2019 in Lubricants
Verified
Journal Article
Open access
PDF file
AAAli Abdul-Munaim
Ali Abdul-Munaim
THTorrey Holland
Torrey Holland
Poopalasingam SivakumarPoopalasingam Sivakumar
Poopalasingam Sivakumar
DWDennis Watson
Dennis Watson
Fourier Transform-Infrared (FT-IR) spectroscopy was used to analyze gasoline engine oil (SAE 5W20) samples that were exposed to seven different oxidation times (0 h, 24 h, 48 h, 72 h, 96 h, 120 h, and 144 h) to determine the best wavenumbers and wavenumber ranges for the discrimination of the oxidation times. The thermal oxidation process generated oil samples with varying total base number (TBN) levels. Each wavenumber (400–3900 cm−1) and wavenumber ranges identified from the literature and this study were statistically analyzed to determine which wavenumbers and wavenumber ranges could discriminate among all oxidation times. Linear regression was used with the best wavenumbers and wavenumber ranges to predict oxidation time.

3 April 2021 in Lubricants
Verified
Journal Article
Open access
PDF file
THTorrey Holland
Torrey Holland
AAAli Abdul-Munaim
Ali Abdul-Munaim
CMChristopher Mandrell
Christopher Mandrell
RKRobinson Karunanithy
Robinson Karunanithy
DWDennis Watson
Dennis Watson
Poopalasingam SivakumarPoopalasingam Sivakumar
Poopalasingam Sivakumar
Samples of gasoline engine oil (SAE 5W20) that had been exposed to various oxidation times were inspected with a UV-Visible (UV-Vis) spectrophotometer to select the best wavelengths and wavelength ranges for distinguishing oxidation times. Engine oil samples were subjected to different thermal oxidation periods of 0, 24, 48, 72, 96, 120, and 144 hours, resulting in a range of total base number (TBN) levels. Each wavelength (190.5 – 849.5 nm) and selected wavelength ranges were evaluated to determine the wavelength or wavelength ranges that could best distinguish among all oxidation times. The best wavelengths and wavelength ranges were analyzed with linear regression to determine the best wavelength or range to predict oxidation time.

5 September 2020 in Life
Verified
Journal Article
Open access
PDF file
CMChristopher T. Mandrell
Christopher T. Mandrell
THTorrey Holland
Torrey Holland
JWJames Wheeler
James Wheeler
SESakineh M. A. Esmaeili
Sakineh M. A. Esmaeili
KAKshitij Amar
Kshitij Amar
Poopalasingam SivakumarPoopalasingam Sivakumar
Poopalasingam Sivakumar
A machine learning approach is applied to Raman spectra of cells from the MIA PaCa-2 human pancreatic cancer cell line to distinguish between tumor repopulating cells (TRCs) and parental control cells, and to aid in the identification of molecular signatures. Fifty-one Raman spectra from the two types of cells are analyzed to determine the best combination of data type, dimension size, and classification technique to differentiate the cell types. An accuracy of 0.98 is obtained from support vector machine (SVM) and k-nearest neighbor (kNN) classifiers with various dimension reduction and feature selection tools. We also identify some possible biomolecules that cause the spectral peaks that led to the best results.