Ryan Staupe

Dr. Ryan Staupe

orcid

Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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10 April 2017 in Nature
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AHAlexander C. Huang
Alexander C. Huang
MPMichael A. Postow
Michael A. Postow
RORobert J. Orlowski
Robert J. Orlowski
RMRosemarie Mick
Rosemarie Mick
BBBertram Bengsch
Bertram Bengsch
EWE. John Wherry
E. John Wherry

2 March 2014 in Nature
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Journal Article
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NDNicole A. Doria-Rose
Nicole A. Doria-Rose
CSChaim A. Schramm
Chaim A. Schramm
JGJason Gorman
Jason Gorman
PMPenny Moore
Penny Moore
JBJinal N. Bhiman
Jinal N. Bhiman
JMJohn R. Mascola
John R. Mascola

18 March 2016 in Science
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Journal Article
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DCDavide Corti
Davide Corti
JMJohn Misasi
John Misasi
SMSabue Mulangu
Sabue Mulangu
DSDaphne A. Stanley
Daphne A. Stanley
MKMasaru Kanekiyo
Masaru Kanekiyo
Nancy J. SullivanNancy J. Sullivan
Nancy J. Sullivan
Antibodies block Ebola virus entry: The recent Ebola virus outbreak in West Africa illustrates the need for both an effective vaccine and therapies to treat infected individuals. Corti et al. isolated two monoclonal antibodies from a survivor of the 1995 Kikwit outbreak and demonstrated their therapeutic efficacy in Ebola virus–infected macaques. In fact, one antibody protected macaques when it was given up to 5 days after infection. Misasi et al. solved the crystal structures of fragments of the two antibodies bound to the Ebola virus glycoprotein (GP), which mediates viral cell entry. The two antibodies targeted different regions of GP, but in both cases blocked steps required for viral entry. Science , this issue pp. 1339 & 1343

26 May 2013 in Nature Structural & Molecular Biology
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MPMarie Pancera
Marie Pancera
SSSyed Shahzad-Ul-Hussan
Syed Shahzad-Ul-Hussan
NDNicole A Doria-Rose
Nicole A Doria-Rose
JMJason McLellan
Jason McLellan
RBRobert T Bailer
Robert T Bailer
PKPeter Kwong
Peter Kwong

1 January 2016 in Journal of Virology
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Journal Article
Open access
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NDNicole A. Doria-Rose
Nicole A. Doria-Rose
JBJinal N. Bhiman
Jinal N. Bhiman
RRRyan S. Roark
Ryan S. Roark
CSChaim A. Schramm
Chaim A. Schramm
JGJason Gorman
Jason Gorman
JMJohn Mascola
John Mascola
The epitopes defined by HIV-1 broadly neutralizing antibodies (bNAbs) are valuable templates for vaccine design, and studies of the immunological development of these antibodies are providing insights for vaccination strategies. In addition, the most potent and broadly reactive of these bNAbs have potential for clinical use. We previously described a family of 12 V1V2-directed neutralizing antibodies, CAP256-VRC26, isolated from an HIV-1 clade C-infected donor at years 1, 2, and 4 of infection (N. A. Doria-Rose et al., Nature 509:55–62, 2014,http://dx.doi.org/10.1038/nature13036). Here, we report on the isolation and characterization of new members of the family mostly obtained at time points of peak serum neutralization breadth and potency. Thirteen antibodies were isolated from B cell culture, and eight were isolated using trimeric envelope probes for differential single B cell sorting. One of the new antibodies displayed a 10-fold greater neutralization potency than previously published lineage members. This antibody, CAP256-VRC26.25, neutralized 57% of diverse clade viral isolates and 70% of clade C isolates with remarkable potency. Among the viruses neutralized, the median 50% inhibitory concentration was 0.001 μg/ml. All 33 lineage members targeted a quaternary epitope focused on V2. While all known bNAbs targeting the V1V2 region interact with the N160 glycan, the CAP256-VRC26 antibodies showed an inverse correlation of neutralization potency with dependence on this glycan. Overall, our results highlight the ongoing evolution within a single antibody lineage and describe more potent and broadly neutralizing members with potential clinical utility, particularly in areas where clade C is prevalent.IMPORTANCEStudies of HIV-1 broadly neutralizing antibodies (bNAbs) provide valuable information for vaccine design, and the most potent and broadly reactive of these bNAbs have potential for clinical use. We previously described a family of V1V2-directed neutralizing antibodies from an HIV-1 clade C-infected donor. Here, we report on the isolation and characterization of new members of the family mostly obtained at time points of peak serum neutralization breadth and potency. One of the new antibodies, CAP256-VRC26.25, displayed a 10-fold greater neutralization potency than previously described lineage members. It neutralized 57% of diverse clade viral isolates and 70% of clade C isolates with remarkable potency: the median 50% inhibitory concentration was 0.001 μg/ml. Our results highlight the ongoing evolution within a single antibody lineage and describe more potent and broadly neutralizing members with potential clinical utility, particularly in areas where clade C is prevalent.

10 May 2013 in Science
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Journal Article
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IGIvelin S. Georgiev
Ivelin S. Georgiev
NDNicole A. Doria-Rose
Nicole A. Doria-Rose
TZTongqing Zhou
Tongqing Zhou
PKPeter Kwong
Peter Kwong
RSRyan Staupe
Ryan Staupe
PKPeter D. Kwong
Peter D. Kwong
Building Better Vaccines: In the past few years, several highly potent, broadly neutralizing antibodies (bNAbs) specific for the gp120 envelope protein of HIV-1 have been discovered. The goal of this work is to use this information to inform the design of vaccines that are able to induce such antibodies (see the Perspective by Crowe ). However, because of extensive somatic hypermutation, the epitope bound by these antibodies often does not bind to the germline sequence. Jardine et al. (p. 711 , published online 28 March; see the cover) used computational analysis and in vitro screening to design an immunogen that could bind to VRC01-class bNAbs and to their germline precursors. Georgiev et al. (p. 751 ) took advantage of the fact that only four sites on the HIV viral envelope protein seem to bind bNAbs, and sera that contain particular bNAbs show characteristic patterns of neutralization. An algorithm was developed that could successfully delineate the neutralization specificity of antibodies present in polyclonal sera from HIV-infected patients.