Dongbin Li

Dr. Dongbin Li


Research Focus & Metrics

Academic Career Length

5Years (2022-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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9 September 2024 in Horticulturae
Verified
Journal Article
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YQYi Qin
Yi Qin
GYGuoxia Yang
Guoxia Yang
DLDongbin Li
Dongbin Li
DZDanyidie Zhang
Danyidie Zhang
ZCZhihui Chen
Zhihui Chen
YWyueyan wu
yueyan wu
Rhododendron, a globally popular ornamental flower, is nevertheless limited in our understanding of the mechanisms underlying its fragrance formation. Notably, terpenoids are the most prevalent volatile metabolite produced by plants. In this study, gas chromatography–mass spectrometry (GC–MS), liquid chromatography–mass spectrometry (LC–MS) and transcriptomics sequencing were conducted to analyze the synthesis mechanisms of terpenoid fragrance compounds of petals in fragrant R. fortunei Lindl. (YJ) and non-fragrant R. “Nova Zembla” (NW). The results identified that (-)-myrtenol, linalool, pinene, myrtenyl acetate, and terpineol were key floral aroma substances in YJ. Furthermore, an analysis of KEGG enrichment and differentially expressed genes (DEGs) revealed that the bud and decay stages exhibited the highest number of enriched DEGs among different aroma types, indicating these as critical stages for the synthesis of terpenoid floral compounds. In this study, a structural gene, denoted as RfFDPS, was identified as a negative regulatory gene for monoterpene accumulation and a positive regulatory gene for sesquiterpene accumulation in YJ. Utilizing subcellular localization technology, we determined that RfFDPS proteins are located in the cytoplasm. A functional analysis through transient expression and gene silencing of RfFDPS demonstrated its ability to regulate the accumulation of monoterpenes and sesquiterpenes. The overexpression of RfFDPS led to an increase in the expression of structural genes related to terpenoid synthesis, resulting in a decrease in monoterpenes and an increase in sesquiterpenes. Conversely, gene silencing had the opposite effect. In conclusion, RfFDPS plays a pivotal role in the synthesis and release of terpenoid volatile compounds in YJ petals, laying a solid theoretical foundation for the cultivation and enhancement of aromatic R. species.

15 June 2022 in Agronomy
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Journal Article
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LQLei Qin
Lei Qin
CLChengyuan Li
Chengyuan Li
DLDongbin Li
Dongbin Li
JWJiayan Wang
Jiayan Wang
LYLi Yang
Li Yang
QWQingfei Wu
Qingfei Wu
As a medicinal and edible plant, basil (Ocimum basilicum Linn. var. pilosum (Willd.) Benth.) has rich nutrition and significant economic value. The increase in heat stress caused by global warming adversely affects the growth and yield of plants. However, the response mechanism of basil to heat stress is poorly understood. This work investigated the changes in phenotype, metabolome, and transcriptome in basil under heat stress. The results showed that heat stress triggered severe oxidative damage and photosynthesis inhibition in basil. Metabonomic analysis showed that, compared to the control group, 29 significantly differentially accumulated metabolites (DAMs) were identified after 1 d of heat treatment, and 37 DAMs after the treatment of 3 d. The DAMs were significantly enriched by several pathways such as glycolysis or gluconeogenesis; aminoacyl-tRNA biosynthesis; and alanine, aspartate, and glutamate metabolism. In addition, transcriptomic analysis revealed that 15,066 and 15,445 genes were differentially expressed after 1 d and 3 d of heat treatment, respectively. Among them, 11,183 differentially expressed genes (DEGs) were common response genes under 1 d and 3 d heat treatment, including 5437 down-regulated DEGs and 6746 up-regulated DEGs. All DEGs were significantly enriched in various KEGG (Kyoto Encyclopedia of Genes and Genomes) pathways, most dominated by glyoxylate and dicarboxylate metabolism, followed by starch and sucrose metabolism, and by the biosynthesis and metabolism of other secondary metabolites. Overall, all the above results provided some valuable insights into the molecular mechanism of basil in response to heat stress.

10 October 2024 in Biomolecules
Verified
Journal Article
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FXFengjiao Xu
Fengjiao Xu
SXShican Xu
Shican Xu
LYLi Yang
Li Yang
AQAili Qu
Aili Qu
DLDongbin Li
Dongbin Li
WQWang Qiang
Wang Qiang
(1) Background: Methyl jasmonate-treated D. morbifera adventitious root extract (MeJA-DMARE), enriched with phenolics, has enhanced bioactivities. However, phenolics possess low stability and bioavailability. Substantial evidence indicates that plant extract–phospholipid complex assemblies, known as phytosomes, represent an innovative drug delivery system. (2) Methods: The phytosome complex was created by combining MeJA-DMARE with Soy-L-α-phosphatidylcholine (PC) using three different ratios through two distinct methods (co-solvency method: A1, A2, and A3; thin-layer film method: B1, B2, and B3). (3) Results: Initial evaluation based on UV-Vis, entrapment efficiency (EE%), and loading content (LC%) indicated that B2 exhibited the highest EE% (79.98 ± 1.45) and LC% (69.17 ± 0.14). The phytosome displayed a spherical morphology with a particle size of 210 nm, a notably low polydispersity index of 0.16, and a superior zeta potential value at −25.19 mV. The synthesized phytosome exhibited superior anti-inflammatory activities by inhibiting NO and ROS production (reduced to 8.9% and 55.1% at 250 μg/mL) in RAW cells and adjusting the expression of related inflammatory cytokines; they also slowed lung tumor cell migration (only 2.3% of A549 cells migrated after treatment with phytosomes at 250 μg/mL), promoting ROS generation in A549 cell lines (123.7% compared to control) and stimulating apoptosis of lung cancer-related genes. (4) Conclusions: In conclusion, the MeJA-DMARE phytosome offers stable, economically efficient, and environmentally friendly nanoparticles with superior inflammation and lung tumor inhibition properties. Thus, the MeJA-DMARE phytosome holds promise as an applicable and favorable creation for drug delivery and lung cancer treatment.

21 May 2025 in Plants
Verified
Journal Article
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Hong ZhuHong Zhu
Hong Zhu
DLDongbin Li
Dongbin Li
CYChunlei Yue
Chunlei Yue
HLHepeng Li
Hepeng Li
The genus Rhododendron presents significant challenges for systematic classification due to extensive hybridization and adaptive radiation. Here, we employed double-digest restriction site-associated DNA sequencing (ddRAD-seq) to resolve phylogenetic relationships among nine ecologically significant Rhododendron species (34 accessions) endemic to Zhejiang Province, China, a biodiversity hotspot for this genus. Using R. simsii as the reference genome, we generated 39.40 Gb of high-quality sequencing data with a Q30 score of 96.65% and a GC content of 39.63%, achieving an average alignment rate of 92.79%. Through stringent filtering (QD ≥ 2, MQ ≥ 40), we identified 14,048,702 genome-wide single nucleotide polymorphism (SNP), predominantly characterized by the mutation types T:A>C:G and C:G>T:A. The widespread R. simsii and R. simsii var. putuoense exhibited significant genetic diversity, whereas the low-altitude widespread R. molle and the endemic R. simiarum exhibited lower genetic diversity. Moderate genetic differentiation (Fst = 0.097) was observed between R. simsii and R. simsii var. putuoense, while substantial genetic differentiation was detected among the other Rhododendron species. Principal component analysis (PCA), combined with phylogenomic reconstruction, demonstrated that the Rhododendron genus can be stratified into six well-supported genetic clades. Furthermore, this study provides the first genomic validation of the sibling relationship between R. simsii and its variety, R. simsii var. putuoense, and clarifies the systematic position of R. huadingense, suggesting that it should be classified as a new subgenus. This study establishes ddRAD-seq as a cost-effective tool, providing both a theoretical framework for SNP-based phylogenetics and critical insights for conserving China’s azalea biodiversity.

5 January 2025 in Forests
Verified
Journal Article
Open access
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DLDongbin Li
Dongbin Li
HLHepeng Li
Hepeng Li
Hong ZhuHong Zhu
Hong Zhu
The genetic characteristics of postintroduced Metasequoia glyptostroboides from three forest areas in Ningbo Forest Farm, China, were analyzed by using polymorphic SSR markers. High genetic diversity at the species level (Na = 5.306, Ne = 3.411, I = 1.269, Ho = 0.604 and He = 0.640) was detected. No significant difference in diversity was observed between mother trees and seedlings, indicating random mating or the absence of a founder effect. The group with the highest diversity was Shangliang seedlings (SLGS). Inbreeding was detected in two groups (SLGM and LXS), possibly due to biased sampling and selective pressures on these groups. AMOVA disclosed most genetic variation within groups (88%), with moderate differentiation (Fst = 0.117) and some gene flow (Nm = 1.887) between groups. Population structure analysis classified the six groups into distinct units, highlighting the need for tailored conservation strategies. These findings inform conservation and management practices for the introduced M. glyptostroboides.