Hanieh Heydarlou

Mrs. Hanieh Heydarlou


Research Focus & Metrics

Academic Career Length

3Years (2024-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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28 January 2025 in Cancers
Verified
Journal Article
Open access
PDF file
HHHanieh Heydarlou
Hanieh Heydarlou
LHLeigh Hodson
Leigh Hodson
MDMohsen Dorraki
Mohsen Dorraki
THTheresa Elizabeth Hickey
Theresa Elizabeth Hickey
WTWayne Tilley
Wayne Tilley
Ali Farajpour OuderjiAli Farajpour Ouderji
Ali Farajpour Ouderji
Background: To progress research into the biological mechanisms that link mammographic breast density to breast cancer risk, fibroglandular breast density can be used as a surrogate measure. This study aimed to develop a computational tool to classify fibroglandular breast density in hematoxylin and eosin (H&E)-stained breast tissue sections using deep learning approaches that would assist future mammographic density research. Methods: Four different architectural configurations of transferred MobileNet-v2 convolutional neural networks (CNNs) and four different models of vision transformers were developed and trained on a database of H&E-stained normal human breast tissue sections (965 tissue blocks from 93 patients) that had been manually classified into one of five fibroglandular density classes, with class 1 being very low fibroglandular density and class 5 being very high fibroglandular density. Results: The MobileNet-Arc 1 and ViT model 1 achieved the highest overall F1 scores of 0.93 and 0.94, respectively. Both models exhibited the lowest false positive rate and highest true positive rate in class 5, while the most challenging classification was class 3, where images from classes 2 and 4 were mistakenly classified as class 3. The area under the curves (AUCs) for all classes were higher than 0.98. Conclusions: Both the ViT and MobileNet models showed promising performance in the accurate classification of H&E-stained tissue sections across all five fibroglandular density classes, providing a rapid and easy-to-use computational tool for breast density analysis.

13 December 2024 in Preprints.org
Verified
Preprint
Open access
PDF file
HHHanieh Heydarlou
Hanieh Heydarlou
LHLeigh Hodson
Leigh Hodson
MDMohsen Dorraki
Mohsen Dorraki
THTheresa Elizabeth Hickey
Theresa Elizabeth Hickey
WTWayne Tilley
Wayne Tilley
AFAli Farajpour
Ali Farajpour
Background: To study the biological underpinning of mammographic breast density, fibroglandular breast density can be used as a surrogate marker of breast cancer risk. This study aimed to develop a computational tool to classify fibroglandular breast density in hematoxylin and eosin (H&E)-stained breast tissue sections using deep learning approaches that would assist future mammographic density research. Methods: Four different architectural configurations of transferred MobileNet-v2 convolutional neural networks (CNNs) and four different models of vision transformers (ViTs) were developed and trained on a database of H&E-stained normal human breast tissue sections (965 tissue blocks from 93 patients) that had been manually classified into one of five fibroglandular density classes, with class 1 being very low fibroglandular density and class 5 being very high fibroglandular density. Results: The MobileNet-Arc 1 and ViT model 1 achieved the highest overall F1-scores of 0.93 and 0.94, respectively. Both models exhibited the lowest false positive rate and highest true positive rate in class 5, while the most challenging classification was class 3, where images from classes 2 and 4 were mistakenly classified as class 3. The area under the curves (AUCs) for all classes were higher than 0.98. Conclusions: Both the ViT and MobileNet models showed promising performance in the accurate classification of H&E-stained tissue sections across all five fibroglandular density classes, providing a rapid and easy-to-use computational tool for breast density analysis.