Jonathan Thiessen

Dr. Jonathan Thiessen

orcid

Research Focus & Metrics

Academic Career Length

17Years (2010-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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13 August 2013 in NMR in Biomedicine
Verified
Journal Article
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JTJonathan Thiessen
Jonathan Thiessen
YZYanbo Zhang
Yanbo Zhang
HZHandi Zhang
Handi Zhang
LWLingyan Wang
Lingyan Wang
RBRichard Buist
Richard Buist
MMMelanie Martin
Melanie Martin

1 May 2019 in BMC Musculoskeletal Disorders
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Journal Article
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HAHayden F. Atkinson
Hayden F. Atkinson
TBTrevor B. Birmingham
Trevor B. Birmingham
RMRebecca Moyer
Rebecca Moyer
DYDaniel Yacoub
Daniel Yacoub
LKLauren E. Kanko
Lauren E. Kanko
RTR. Terry Thompson
R. Terry Thompson
Magnetic resonance imaging (MRI) T2 and T1ρ relaxation are increasingly being proposed as imaging biomarkers potentially capable of detecting biochemical changes in articular cartilage before structural changes are evident. We aimed to: 1) summarize MRI methods of published studies investigating T2 and T1ρ relaxation time in participants at risk for but without radiographic knee OA; and 2) compare T2 and T1ρ relaxation between participants at-risk for knee OA and healthy controls. We conducted a systematic review of studies reporting T2 and T1ρ relaxation data that included both participants at risk for knee OA and healthy controls. Participant characteristics, MRI methodology, and T1ρ and T2 relaxation data were extracted. Standardized mean differences (SMDs) were calculated within each study. Pooled effect sizes were then calculated for six commonly segmented knee compartments. 55 articles met eligibility criteria. There was considerable variability between scanners, coils, software, scanning protocols, pulse sequences, and post-processing. Moderate risk of bias due to lack of blinding was common. Pooled effect sizes indicated participants at risk for knee OA had lengthened T2 relaxation time in all compartments (SMDs from 0.33 to 0.74; p < 0.01) and lengthened T1ρ relaxation time in the femoral compartments (SMD from 0.35 to 0.40; p < 0.001). T2 and T1ρ relaxation distinguish participants at risk for knee OA from healthy controls. Greater standardization of MRI methods is both warranted and required for progress towards biomarker validation.

1 January 2018 in NeuroImage: Clinical
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UAUdunna Anazodo
Udunna Anazodo
EFElizabeth Finger
Elizabeth Finger
BKBenjamin Yin Ming Kwan
Benjamin Yin Ming Kwan
WPWilliam Pavlosky
William Pavlosky
JWJames Claude Warrington
James Claude Warrington
KLKeith S. St. Lawrence
Keith S. St. Lawrence
The clinical utility of FDG-PET in diagnosing frontotemporal dementia (FTD) has been well demonstrated over the past decades. On the contrary, the diagnostic value of arterial spin labelling (ASL) MRI - a relatively new technique - in clinical diagnosis of FTD has yet to be confirmed. Using simultaneous PET/MRI, we evaluated the diagnostic performance of ASL in identifying pathological abnormalities in FTD (FTD) to determine whether ASL can provide similar diagnostic value as FDG-PET. ASL and FDG-PET images were compared in 10 patients with FTD and 10 healthy older adults. Qualitative and quantitative measures of diagnostic equivalency were used to determine the diagnostic utility of ASL compared to FDG-PET. Sensitivity, specificity, and inter-rater reliability were calculated for each modality from scores of subjective visual ratings and from analysis of regional mean values in thirteen a priori regions of interest (ROI). To determine the extent of concordance between modalities in each patient, individual statistical maps generated from comparison of each patient to controls were compared between modalities using the Jaccard similarity index (JI). Visual assessments revealed lower sensitivity, specificity and inter-rater reliability for ASL (66.67%/62.12%/0.2) compared to FDG-PET (88.43%/90.91%/0.61). Across all regions, ASL performed lower than FDG-PET in discriminating patients from controls (areas under the receiver operating curve: ASL = 0.75 and FDG-PET = 0.87). In all patients, ASL identified patterns of reduced perfusion consistent with FTD, but areas of hypometabolism exceeded hypoperfused areas (group-mean JI = 0.30 ± 0.22). This pilot study demonstrated that ASL can detect similar spatial patterns of abnormalities in individual FTD patients compared to FDG-PET, but its sensitivity and specificity for discriminant diagnosis of a patient from healthy individuals remained unmatched to FDG-PET. Further studies at the individual level are required to confirm the clinical role of ASL in FTD management.

6 June 2016 in IEEE Transactions on Nuclear Science
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Journal Article
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AGAndrew L. Goertzen
Andrew L. Goertzen
GSGreg Stortz
Greg Stortz
JTJonathan Thiessen
Jonathan Thiessen
DBDaryl Bishop
Daryl Bishop
MKMuhammad Salman Khan
Muhammad Salman Khan
CTChristopher J. Thompson
Christopher J. Thompson
We present the initial results from a small animal PET insert designed to be operated inside a 7T MRI. The insert fits within the 114 mm inner diameter of the Bruker BGA-12S gradient coil while accommodating the Bruker 35 mm volume RF coil (outer diameter 60 mm), both used in the Bruker 70/20 MRI systems. The PET insert is a ring comprising 16 detectors. Each detector has a dual-layer offset (DLO) lutetium-yttrium oxyorthsilicate (LYSO) scintillator array read out by two SensL SPMArray4B SiPM arrays. The DLO scintillator has bottom (top) layers of: $22\times 10$ ( $21 \times 9$ ) crystals of size $1.2 \times 1.2 \times 6$ (4) mm 3 for a total of 409 crystals per block, providing an axial extent of 28.17 mm. The detector outputs are multiplexed to four signals using a custom readout board and digitized using the OpenPET data acquisition platform. The detector flood images successfully resolve over 99% of the crystals, with average energy resolution of 12.5 ± 2.0% at 511 keV. Testing of the PET system inside the MRI showed that the PET insert had no effect on MRI image homogeneity and only a small effect on echo planar images (EPI) signal to noise ratio (SNR) (-9%), with neither PET nor MRI images showing obvious artefacts. These acquisitions used the OpenPET operating in “oscilloscope mode” with USB2.0 interface, allowing a maximum total singles event rate of 280 kcps, strongly limiting the count rate capabilities of the system. The PET radial spatial resolution (as measured with a 22 Na point source and FBP-3DRP reconstruction) is 1.17 mm at the centre, degrading to 1.86 mm at a 15 mm radial offset. Simultaneous phantom and mouse PET/MR imaging produced good quality images that were free of any obvious artefacts.

5 January 2015 in Frontiers in Neuroscience
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Journal Article
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UAUdunna C. Anazodo
Udunna C. Anazodo
JTJonathan Thiessen
Jonathan Thiessen
TSTracy Ssali
Tracy Ssali
JMJonathan Mandel
Jonathan Mandel
MGMatthias Gã¼Nther
Matthias Gã¼Nther
KLKeith S. St. Lawrence
Keith S. St. Lawrence
Purpose: To evaluate a potential approach for improved attenuation correction (AC) of PET in simultaneous PET and MRI brain imaging, a straightforward approach that adds bone information missing on Dixon AC was explored. Methods: Bone information derived from individual T1-weighted MRI data using segmentation tools in SPM8, were added to the standard Dixon AC map. Percent relative difference between PET reconstructed with Dixon+bone and with Dixon AC maps were compared across brain regions of 13 oncology patients. The clinical potential of the improved Dixon AC was investigated by comparing relative perfusion (rCBF) measured with arterial spin labeling to relative glucose uptake (rPETdxbone) measured simultaneously with 18F-flurodexoyglucose in several regions across the brain. Results: A gradual increase in PET signal from center to the edge of the brain was observed in PET reconstructed with Dixon+bone. A 5–20% reduction in regional PET signals were observed in data corrected with standard Dixon AC maps. These regional underestimations of PET were either reduced or removed when Dixon+bone AC was applied. The mean relative correlation coefficient between rCBF and rPETdxbone was r = 0.53 (p < 0.001). Marked regional variations in rCBF-to-rPET correlation were observed, with the highest associations in the caudate and cingulate and the lowest in limbic structures. All findings were well matched to observations from previous studies conducted with PET data reconstructed with computed tomography derived AC maps. Conclusion: Adding bone information derived from T1-weighted MRI to Dixon AC maps can improve underestimation of PET activity in hybrid PET-MRI neuroimaging.

1 August 2010 in Neuroscience
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Journal Article
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GOG.L. Odero
G.L. Odero
KOK. Oikawa
K. Oikawa
KGK.A.C. Glazner
K.A.C. Glazner
JSJ. Schapansky
J. Schapansky
DGD. Grossman
D. Grossman
Benedict C. AlbensiBenedict C. Albensi
Benedict C. Albensi