Marios Pattichis

Marios Pattichis

orcid

Research Focus & Metrics

Academic Career Length

32Years (1995-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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2 February 2010 in IEEE Transactions on Medical Imaging
Verified
Journal Article
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CACarla Agurto
Carla Agurto
Víctor MurrayVíctor Murray
Víctor Murray
EBEduardo Barriga
Eduardo Barriga
SMSergio Murillo
Sergio Murillo
MPMarios Pattichis
Marios Pattichis
PSPeter Soliz
Peter Soliz
In this paper, we propose the use of multiscale amplitude-modulation-frequency-modulation (AM-FM) methods for discriminating between normal and pathological retinal images. The method presented in this paper is tested using standard images from the early treatment diabetic retinopathy study. We use 120 regions of 40 × 40 pixels containing four types of lesions commonly associated with diabetic retinopathy (DR) and two types of normal retinal regions that were manually selected by a trained analyst. The region types included microaneurysms, exudates, neovascularization on the retina, hemorrhages, normal retinal background, and normal vessels patterns. The cumulative distribution functions of the instantaneous amplitude, the instantaneous frequency magnitude, and the relative instantaneous frequency angle from multiple scales are used as texture feature vectors. We use distance metrics between the extracted feature vectors to measure interstructure similarity. Our results demonstrate a statistical differentiation of normal retinal structures and pathological lesions based on AM-FM features. We further demonstrate our AM-FM methodology by applying it to classification of retinal images from the MESSIDOR database. Overall, the proposed methodology shows significant capability for use in automatic DR screening.

1 July 2011 in Investigative Ophthalmology & Visual Science
Verified
Journal Article
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CACarla Agurto
Carla Agurto
EBE. Simon Barriga
E. Simon Barriga
Víctor MurrayVíctor Murray
Víctor Murray
SNSheila Nemeth
Sheila Nemeth
RCRobert Crammer
Robert Crammer
PSPeter Soliz
Peter Soliz
Purpose.: To describe and evaluate the performance of an algorithm that automatically classifies images with pathologic features commonly found in diabetic retinopathy (DR) and age-related macular degeneration (AMD). Methods.: Retinal digital photographs (N = 2247) of three fields of view (FOV) were obtained of the eyes of 822 patients at two centers: The Retina Institute of South Texas (RIST, San Antonio, TX) and The University of Texas Health Science Center San Antonio (UTHSCSA). Ground truth was provided for the presence of pathologic conditions, including microaneurysms, hemorrhages, exudates, neovascularization in the optic disc and elsewhere, drusen, abnormal pigmentation, and geographic atrophy. The algorithm was used to report on the presence or absence of disease. A detection threshold was applied to obtain different values of sensitivity and specificity with respect to ground truth and to construct a receiver operating characteristic (ROC) curve. Results.: The system achieved an average area under the ROC curve (AUC) of 0.89 for detection of DR and of 0.92 for detection of sight-threatening DR (STDR). With a fixed specificity of 0.50, the system's sensitivity ranged from 0.92 for all DR cases to 1.00 for clinically significant macular edema (CSME). Conclusions.: A computer-aided algorithm was trained to detect different types of pathologic retinal conditions. The cases of hard exudates within 1 disc diameter (DD) of the fovea (surrogate for CSME) were detected with very high accuracy (sensitivity = 1, specificity = 0.50), whereas mild nonproliferative DR was the most challenging condition (sensitivity= 0.92, specificity = 0.50). The algorithm was also tested on images with signs of AMD, achieving a performance of AUC of 0.84 (sensitivity = 0.94, specificity = 0.50).

18 October 2013 in IEEE Transactions on Computers
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Journal Article
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FSFareena Saqib
Fareena Saqib
ADAindrik Dutta
Aindrik Dutta
JPJim Plusquellic
Jim Plusquellic
POPhilip Ortiz
Philip Ortiz
MPMarios Pattichis
Marios Pattichis
Decision tree classification (DTC) is a widely used technique in data mining algorithms known for its high accuracy in forecasting. As technology has progressed and available storage capacity in modern computers increased, the amount of data available to be processed has also increased substantially, resulting in much slower induction and classification times. Many parallel implementations of DTC algorithms have already addressed the issues of reliability and accuracy in the induction process. In the classification process, larger amounts of data require proportionately more execution time, thus hindering the performance of legacy systems. We have devised a pipelined architecture for the implementation of axis parallel binary DTC that dramatically improves the execution time of the algorithm while consuming minimal resources in terms of area. Scalability is achieved when connected to a high-speed communication unit capable of performing data transfers at a rate similar to that of the DTC engine. We propose a hardware accelerated solution composed of parallel processing nodes capable of independently processing data from a streaming source. Each engine processes the data in a pipelined fashion to use resources more efficiently and increase the achievable throughput. The results show that this system is 3.5 times faster than the existing hardware implementation of classification.

17 July 2007 in Applied Intelligence
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Journal Article
Open access
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EKEfthyvoulos Kyriacou
Efthyvoulos Kyriacou
MPMarios Pattichis
Marios Pattichis
Constantinos PattichisConstantinos Pattichis
Constantinos Pattichis
AMA. Mavrommatis
A. Mavrommatis
CCC. I. Christodoulou
C. I. Christodoulou
ANA. Nicolaides
A. Nicolaides
The aim of this study was to investigate the usefulness of multilevel binary and gray scale morphological analysis in the assessment of atherosclerotic carotid plaques. Ultrasound images were recorded from 137 asymptomatic and 137 symptomatic plaques (Stroke, Transient Ischaemic Attack (TIA), Amaurosis Fugax (AF)). We carefully develop the clinical motivation behind our approach. We do this by relating the proposed L-images, M-images and H-images in terms of the clinically established hypoechoic, isoechoic and hyperechoic classification. Normalized pattern spectra were computed for both a structural, multilevel binary morphological model, and a direct gray scale morphology model. From the plots of the average pattern spectra, it is clear that we have significant differences between the symptomatic and asymptomatic spectra. Here, we note that the morphological measurements appear to be in agreement with the clinical assertion that symptomatic plaques tend to have large lipid cores while the asymptomatic plaques tend to have small lipid cores. The derived pattern spectra were used as classification features with two different classifiers, the Probabilistic Neural Network (PNN) and the Support Vector Machine (SVM). Both classifiers were used for classifying the pattern spectra into either a symptomatic or an asymptomatic class. The highest percentage of correct classifications score was 73.7% for multilevel binary morphological image analysis and 66.8% for gray scale morphological analysis. Both were achieved using the SVM classifier. Among all features, the L-image pattern spectra, that also measure the distributions of the lipid core components (and some non-lipid components) gave the best classification results.

12 January 2010 in IEEE Transactions on Image Processing
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Journal Article
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Víctor MurrayVíctor Murray
Víctor Murray
PRPaul Rodriguez
Paul Rodriguez
MPMarios Pattichis
Marios Pattichis
We develop new multiscale amplitude-modulation frequency-modulation (AM-FM) demodulation methods for image processing. The approach is based on three basic ideas: (i) AM-FM demodulation using a new multiscale filterbank, (ii) new, accurate methods for instantaneous frequency (IF) estimation, and (iii) multiscale least squares AM-FM reconstructions. In particular, we introduce a variable-spacing local linear phase (VS-LLP) method for improved instantaneous frequency (IF) estimation and compare it to an extended quasilocal method and the quasi-eigen function approximation (QEA). It turns out that the new VS-LLP method is a generalization of the QEA method where we choose the best integer spacing between the samples to adapt as a function of frequency. We also introduce a new quasi-local method (QLM) for IF and IA estimation and discuss some of its advantages and limitations. The new IF estimation methods lead to significantly improved estimates. We present different multiscale decompositions to show that the proposed methods can be used to reconstruct and analyze general images.

2 January 2014 in IEEE Journal of Biomedical and Health Informatics
Verified
Journal Article
Closed access
CACarla Agurto
Carla Agurto
Víctor MurrayVíctor Murray
Víctor Murray
HYHonggang Yu
Honggang Yu
JWJeffrey Wigdahl
Jeffrey Wigdahl
MPMarios Pattichis
Marios Pattichis
PSPeter Soliz
Peter Soliz
Pathologies that occur on or near the fovea, such as clinically significant macular edema (CSME), represent high risk for vision loss. The presence of exudates, lipid residues of serous leakage from damaged capillaries, has been associated with CSME, in particular if they are located one optic disc-diameter away from the fovea. In this paper, we present an automatic system to detect exudates in the macula. Our approach uses optimal thresholding of instantaneous amplitude (IA) components that are extracted from multiple frequency scales to generate candidate exudate regions. For each candidate region, we extract color, shape, and texture features that are used for classification. Classification is performed using partial least squares (PLS). We tested the performance of the system on two different databases of 652 and 400 images. The system achieved an area under the receiver operator characteristic curve (AUC) of 0.96 for the combination of both databases and an AUC of 0.97 for each of them when they were evaluated independently.