Francisco de Assis de Carvalho Pinto

Dr. Francisco de Assis de Carvalho Pinto

orcid

Research Focus & Metrics

Academic Career Length

26Years (2001-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 May 2019 in Plant Science
Verified
Journal Article
Closed access
RMReyazul Rouf Mir
Reyazul Rouf Mir
MRMatthew Reynolds
Matthew Reynolds
FPFrancisco Pinto
Francisco Pinto
MKMohd Anwar Khan
Mohd Anwar Khan
MBMohd Ashraf Bhat
Mohd Ashraf Bhat

3 July 2015 in Global Change Biology
Verified
Journal Article
Closed access
PDF file
URUwe Rascher
Uwe Rascher
LALuis Alonso
Luis Alonso
ABA. Burkart
A. Burkart
CCC. Cilia
C. Cilia
Sergio CogliatiSergio Cogliati
Sergio Cogliati
FZFrantišek Zemek
František Zemek

1 June 2020 in Plant Science
Verified
Journal Article
Open access
MRMatthew Reynolds
Matthew Reynolds
SCScott Chapman
Scott Chapman
LCLeonardo A. Crespo-Herrera
Leonardo A. Crespo-Herrera
GMGemma Molero
Gemma Molero
SMSuchismita Mondal
Suchismita Mondal
SSSivakumar Sukumaran
Sivakumar Sukumaran
The word phenotyping can nowadays invoke visions of a drone or phenocart moving swiftly across research plots collecting high-resolution data sets on a wide array of traits. This has been made possible by recent advances in sensor technology and data processing. Nonetheless, more comprehensive often destructive phenotyping still has much to offer in breeding as well as research. This review considers the 'breeder friendliness' of phenotyping within three main domains: (i) the 'minimum data set', where being 'handy' or accessible and easy to collect and use is paramount, visual assessment often being preferred; (ii) the high throughput phenotyping (HTP), relatively new for most breeders, and requiring significantly greater investment with technical hurdles for implementation and a steeper learning curve than the minimum data set; (iii) detailed characterization or 'precision' phenotyping, typically customized for a set of traits associated with a target environment and requiring significant time and resources. While having been the subject of debate in the past, extra investment for phenotyping is becoming more accepted to capitalize on recent developments in crop genomics and prediction models, that can be built from the high-throughput and detailed precision phenotypes. This review considers different contexts for phenotyping, including breeding, exploration of genetic resources, parent building and translational research to deliver other new breeding resources, and how the different categories of phenotyping listed above apply to each. Some of the same tools and rules of thumb apply equally well to phenotyping for genetic analysis of complex traits and gene discovery.

20 February 2015 in Geophysical Research Letters
Verified
Journal Article
Open access
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Micol RossiniMicol Rossini
Micol Rossini
LNL. Nedbal
L. Nedbal
LGLuis Guanter
Luis Guanter
AAAlexander Ac
Alexander Ac
LALuis Alonso
Luis Alonso
URUwe Rascher
Uwe Rascher
Remote estimation of Sun‐induced chlorophyll fluorescence emitted by terrestrial vegetation can provide an unparalleled opportunity to track spatiotemporal variations of photosynthetic efficiency. Here we provide the first direct experimental evidence that the two peaks of the chlorophyll fluorescence spectrum can be accurately mapped from high‐resolution radiance spectra and that the signal is linked to variations in actual photosynthetic efficiency. Red and far red fluorescence measured using a novel airborne imaging spectrometer over a grass carpet treated with an herbicide known to inhibit photosynthesis was significantly higher than the corresponding signal from an equivalent untreated grass carpet. The reflectance signal of the two grass carpets was indistinguishable, confirming that the fast dynamic changes in fluorescence emission were related to variations in the functional status of actual photosynthesis induced by herbicide application. Our results from a controlled experiment at the local scale illustrate the potential for the global mapping of terrestrial photosynthesis through space‐borne measurements of chlorophyll fluorescence.

1 May 2019 in Plant Science
Verified
Journal Article
Open access
TRThomas Roitsch
Thomas Roitsch
LCLlorenç Cabrera-Bosquet
Llorenç Cabrera-Bosquet
AFAntoine Fournier
Antoine Fournier
Kioumars GhamkharKioumars Ghamkhar
Kioumars Ghamkhar
JJJosé Jiménez-Berni
José Jiménez-Berni
EOEric Ober
Eric Ober
At the 4th International Plant Phenotyping Symposium meeting of the International Plant Phenotyping Network (IPPN) in 2016 at CIMMYT in Mexico, a workshop was convened to consider ways forward with sensors for phenotyping. The increasing number of field applications provides new challenges and requires specialised solutions. There are many traits vital to plant growth and development that demand phenotyping approaches that are still at early stages of development or elude current capabilities. Further, there is growing interest in low-cost sensor solutions, and mobile platforms that can be transported to the experiments, rather than the experiment coming to the platform. Various types of sensors are required to address diverse needs with respect to targets, precision and ease of operation and readout. Converting data into knowledge, and ensuring that those data (and the appropriate metadata) are stored in such a way that they will be sensible and available to others now and for future analysis is also vital. Here we are proposing mechanisms for "next generation phenomics" based on our learning in the past decade, current practice and discussions at the IPPN Symposium, to encourage further thinking and collaboration by plant scientists, physicists and engineering experts.

1 January 2021 in Plant Phenomics
Verified
Journal Article
Open access
PDF file
EDEtienne David
Etienne David
MSMario Serouart
Mario Serouart
DSDaniel Smith
Daniel Smith
SMSimon Madec
Simon Madec
KVKaaviya Velumani
Kaaviya Velumani
Wei GuoWei Guo
Wei Guo
The Global Wheat Head Detection (GWHD) dataset was created in 2020 and has assembled 193,634 labelled wheat heads from 4700 RGB images acquired from various acquisition platforms and 7 countries/institutions. With an associated competition hosted in Kaggle, GWHD_2020 has successfully attracted attention from both the computer vision and agricultural science communities. From this first experience, a few avenues for improvements have been identified regarding data size, head diversity, and label reliability. To address these issues, the 2020 dataset has been reexamined, relabeled, and complemented by adding 1722 images from 5 additional countries, allowing for 81,553 additional wheat heads. We now release in 2021 a new version of the Global Wheat Head Detection dataset, which is bigger, more diverse, and less noisy than the GWHD_2020 version.