José Manuel Paredes

Dr. José Manuel Paredes

Department of physical chemistry, Faculty of Pharmacy, University of Granada.
orcid

Research Focus & Metrics

Academic Career Length

20Years (2007-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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17 May 2016 in Chemical Science
Verified
Journal Article
Open access
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SMSara P. Morcillo
Sara P. Morcillo
DMDelia Miguel
Delia Miguel
Luis Alvarez de CienfuegosLuis Alvarez de Cienfuegos
Luis Alvarez de Cienfuegos
JJJosé Justicia
José Justicia
SASergio Abbate
Sergio Abbate
JGJuan Manuel García-Ruiz
Juan Manuel García-Ruiz
Chiral stapled o -OPEs show excellent circular polarized luminescence responses ( g lum of 1.1 × 10 −2 ) which can be modulated by carbophilic interactions.

21 September 2012 in The Journal of Physical Chemistry A
Verified
Journal Article
Closed access
NBNoël Boens
Noël Boens
VLVolker Leen
Volker Leen
WDWim Dehaen
Wim Dehaen
LWLina Wang
Lina Wang
KRKoen Robeyns
Koen Robeyns
JAJose M. Alvarez-Pez
Jose M. Alvarez-Pez

25 June 2013 in The Journal of Physical Chemistry B
Verified
Journal Article
Closed access
JPJosé Manuel Paredes
José Manuel Paredes
María Dolores Girón GonzálezMaría Dolores Girón González
María Dolores Girón González
Maria J. Ruedas-RamaMaria J. Ruedas-Rama
Maria J. Ruedas-Rama
Angel OrteAngel Orte
Angel Orte
LGLuis Crovetto González
Luis Crovetto González
Jose Maria Alvarez PezJose Maria Alvarez Pez
Jose Maria Alvarez Pez

7 April 2016 in ACS Chemical Biology
Verified
Journal Article
Closed access
JPJosé Manuel Paredes
José Manuel Paredes
AIAurora Irene idilli
Aurora Irene idilli
LMLetizia Mariotti
Letizia Mariotti
GLGabriele Losi
Gabriele Losi
LALyaysan R. Arslanbaeva
Lyaysan R. Arslanbaeva
DADaniele Arosio
Daniele Arosio

9 January 2017 in Scientific Reports
Verified
Journal Article
Open access
FCFabio Castello
Fabio Castello
JPJosé Manuel Paredes
José Manuel Paredes
Maria J. Ruedas-RamaMaria J. Ruedas-Rama
Maria J. Ruedas-Rama
MMMiguel Martin
Miguel Martin
MRMar Roldan
Mar Roldan
Angel OrteAngel Orte
Angel Orte
The self-assembly of proteins into fibrillar structures called amyloid fibrils underlies the onset and symptoms of neurodegenerative diseases, such as Alzheimer’s and Parkinson’s. However, the molecular basis and mechanism of amyloid aggregation are not completely understood. For many amyloidogenic proteins, certain oligomeric intermediates that form in the early aggregation phase appear to be the principal cause of cellular toxicity. Recent computational studies have suggested the importance of nonspecific interactions for the initiation of the oligomerization process prior to the structural conversion steps and template seeding, particularly at low protein concentrations. Here, using advanced single-molecule fluorescence spectroscopy and imaging of a model SH3 domain, we obtained direct evidence that nonspecific aggregates are required in a two-step nucleation mechanism of amyloid aggregation. We identified three different oligomeric types according to their sizes and compactness and performed a full mechanistic study that revealed a mandatory rate-limiting conformational conversion step. We also identified the most cytotoxic species, which may be possible targets for inhibiting and preventing amyloid aggregation.

1 March 2019 in Journal of Biological Chemistry
Verified
Journal Article
Open access
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QZQiangmin Zhang
Qiangmin Zhang
KXKunhong Xiao
Kunhong Xiao
JPJosé Manuel Paredes
José Manuel Paredes
TMTatyana Mamonova
Tatyana Mamonova
WSW. Bruce Sneddon
W. Bruce Sneddon
PFPeter A. Friedman
Peter A. Friedman
Na+-H+ exchanger regulatory factor-1 (NHERF1) is a PDZ protein that scaffolds membrane proteins, including Na–phosphate co-transport protein 2A (NPT2A) at the plasma membrane. NHERF1 is a phosphoprotein with 40 Ser and Thr residues. Here, using tandem MS analysis, we characterized the sites of parathyroid hormone (PTH)-induced NHERF1 phosphorylation and identified 10 high-confidence phosphorylation sites. Ala replacement at Ser46, Ser162, Ser181, Ser269, Ser280, Ser291, Thr293, Ser299, and Ser302 did not affect phosphate uptake, but Ser290Ala substitution abolished PTH-dependent phosphate transport. Unexpectedly, Ser290 was rapidly dephosphorylated and rephosphorylated after PTH stimulation, and we found that protein phosphatase 1α (PP1α), which binds NHERF1 through a conserved VxF/W PP1 motif, dephosphorylates Ser290. Mutating 257VPF259 eliminated PP1 binding and blunted dephosphorylation. Tautomycetin blocked PP1 activity and abrogated PTH-sensitive phosphate transport. Using fluorescence lifetime imaging (FLIM), we observed that PTH paradoxically and transiently elevates intracellular phosphate. Added phosphate blocked PP1α-mediated Ser290 dephosphorylation of recombinant NHERF1. Hydrogen–deuterium exchange MS revealed that β-sheets in NHERF1’s PDZ2 domain display lower deuterium uptake than those in the structurally similar PDZ1, implying that PDZ1 is more cloistered. Dephosphorylated NHERF1 exhibited faster exchange at C-terminal residues suggesting that NHERF1 dephosphorylation precedes Ser290 rephosphorylation. Our results show that PP1α and NHERF1 form a holoenzyme and that a multiprotein kinase cascade involving G protein–coupled receptor kinase 6A controls the Ser290 phosphorylation status of NHERF1 and regulates PTH-sensitive, NPT2A-mediated phosphate uptake. These findings reveal how reversible phosphorylation modifies protein conformation and function and the biochemical mechanisms underlying PTH control of phosphate transport.