Annisa Darmawahyuni

Mrs. Annisa Darmawahyuni

orcid

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
10 January 2020 in Electronics
Verified
Journal Article
Open access
PDF file
Siti NurmainiSiti Nurmaini
Siti Nurmaini
ADAnnisa Darmawahyuni
Annisa Darmawahyuni
AMAkhmad Noviar Sakti Mukti
Akhmad Noviar Sakti Mukti
NRNaufal Rachmatullah
Naufal Rachmatullah
Firdaus FirdausFirdaus Firdaus
Firdaus Firdaus
BTBambang Tutuko
Bambang Tutuko
The electrocardiogram (ECG) is a widely used, noninvasive test for analyzing arrhythmia. However, the ECG signal is prone to contamination by different kinds of noise. Such noise may cause deformation on the ECG heartbeat waveform, leading to cardiologists’ mislabeling or misinterpreting heartbeats due to varying types of artifacts and interference. To address this problem, some previous studies propose a computerized technique based on machine learning (ML) to distinguish between normal and abnormal heartbeats. Unfortunately, ML works on a handcrafted, feature-based approach and lacks feature representation. To overcome such drawbacks, deep learning (DL) is proposed in the pre-training and fine-tuning phases to produce an automated feature representation for multi-class classification of arrhythmia conditions. In the pre-training phase, stacked denoising autoencoders (DAEs) and autoencoders (AEs) are used for feature learning; in the fine-tuning phase, deep neural networks (DNNs) are implemented as a classifier. To the best of our knowledge, this research is the first to implement stacked autoencoders by using DAEs and AEs for feature learning in DL. Physionet’s well-known MIT-BIH Arrhythmia Database, as well as the MIT-BIH Noise Stress Test Database (NSTDB). Only four records are used from the NSTDB dataset: 118 24 dB, 118 −6 dB, 119 24 dB, and 119 −6 dB, with two levels of signal-to-noise ratio (SNRs) at 24 dB and −6 dB. In the validation process, six models are compared to select the best DL model. For all fine-tuned hyperparameters, the best model of ECG heartbeat classification achieves an accuracy, sensitivity, specificity, precision, and F1-score of 99.34%, 93.83%, 99.57%, 89.81%, and 91.44%, respectively. As the results demonstrate, the proposed DL model can extract high-level features not only from the training data but also from unseen data. Such a model has good application prospects in clinical practice.

1 December 2020 in Future Generation Computer Systems
Verified
Journal Article
Open access
Siti NurmainiSiti Nurmaini
Siti Nurmaini
ATAlexander Edo Tondas
Alexander Edo Tondas
ADAnnisa Darmawahyuni
Annisa Darmawahyuni
MRMuhammad Naufal Rachmatullah
Muhammad Naufal Rachmatullah
RPRadiyati Umi Partan
Radiyati Umi Partan
RKRahmi Khoirani
Rahmi Khoirani

30 November 2021 in Sensors
Verified
Journal Article
Open access
PDF file
Siti NurmainiSiti Nurmaini
Siti Nurmaini
NRNaufal Rachmatullah
Naufal Rachmatullah
AIade iriani
ade iriani
ADAnnisa Darmawahyuni
Annisa Darmawahyuni
BTBambang Tutuko
Bambang Tutuko
NBNuswil Bernolian
Nuswil Bernolian
Accurate segmentation of fetal heart in echocardiography images is essential for detecting the structural abnormalities such as congenital heart defects (CHDs). Due to the wide variations attributed to different factors, such as maternal obesity, abdominal scars, amniotic fluid volume, and great vessel connections, this process is still a challenging problem. CHDs detection with expertise in general are substandard; the accuracy of measurements remains highly dependent on humans’ training, skills, and experience. To make such a process automatic, this study proposes deep learning-based computer-aided fetal heart echocardiography examinations with an instance segmentation approach, which inherently segments the four standard heart views and detects the defect simultaneously. We conducted several experiments with 1149 fetal heart images for predicting 24 objects, including four shapes of fetal heart standard views, 17 objects of heart-chambers in each view, and three cases of congenital heart defect. The result showed that the proposed model performed satisfactory performance for standard views segmentation, with a 79.97% intersection over union and 89.70% Dice coefficient similarity. It also performed well in the CHDs detection, with mean average precision around 98.30% for intra-patient variation and 82.42% for inter-patient variation. We believe that automatic segmentation and detection techniques could make an important contribution toward improving congenital heart disease diagnosis rates.

22 July 2019 in Applied Sciences
Verified
Journal Article
Open access
PDF file
Siti NurmainiSiti Nurmaini
Siti Nurmaini
RPRadiyati Umi Partan
Radiyati Umi Partan
Wahyu CaesarendraWahyu Caesarendra
Wahyu Caesarendra
TDTresna Dewi
Tresna Dewi
NRNaufal Rachmatullah
Naufal Rachmatullah
Firdaus FirdausFirdaus Firdaus
Firdaus Firdaus
An automated classification system based on a Deep Learning (DL) technique for Cardiac Disease (CD) monitoring and detection is proposed in this paper. The proposed DL architecture is divided into Deep Auto-Encoders (DAEs) as an unsupervised form of feature learning and Deep Neural Networks (DNNs) as a classifier. The objective of this study is to improve on the previous machine learning technique that consists of several data processing steps such as feature extraction and feature selection or feature reduction. It is also noticed that the previously used machine learning technique required human interference and expertise in determining robust features, yet was time-consuming in the labeling and data processing steps. In contrast, DL enables an embedded feature extraction and feature selection in DAEs pre-training and DNNs fine-tuning process directly from raw data. Hence, DAEs is able to extract high-level of features not only from the training data but also from unseen data. The proposed model uses 10 classes of imbalanced data from ECG signals. Since it is related to the cardiac region, abnormality is usually considered for an early diagnosis of CD. In order to validate the result, the proposed model is compared with the shallow models and DL approaches. Results found that the proposed method achieved a promising performance with 99.73% accuracy, 91.20% sensitivity, 93.60% precision, 99.80% specificity, and a 91.80% F1-Score. Moreover, both the Receiver Operating Characteristic (ROC) curve and the Precision-Recall (PR) curve from the confusion matrix showed that the developed model is a good classifier. The developed model based on unsupervised feature extraction and deep neural network is ready to be used on a large population before its installation for clinical usage.

31 October 2022 in Journal of Clinical Medicine
Verified
Journal Article
Open access
PDF file
Siti NurmainiSiti Nurmaini
Siti Nurmaini
RPRadiyati Umi Partan
Radiyati Umi Partan
NBNuswil Bernolian
Nuswil Bernolian
AIade iriani
ade iriani
BTBambang Tutuko
Bambang Tutuko
JMJohanes Mose
Johanes Mose
Early prenatal screening with an ultrasound (US) can significantly lower newborn mortality caused by congenital heart diseases (CHDs). However, the need for expertise in fetal cardiologists and the high volume of screening cases limit the practically achievable detection rates. Hence, automated prenatal screening to support clinicians is desirable. This paper presents and analyses potential deep learning (DL) techniques to diagnose CHDs in fetal USs. Four convolutional neural network architectures were compared to select the best classifier with satisfactory results. Hence, dense convolutional network (DenseNet) 201 architecture was selected for the classification of seven CHDs, such as ventricular septal defect, atrial septal defect, atrioventricular septal defect, Ebstein’s anomaly, tetralogy of Fallot, transposition of great arteries, hypoplastic left heart syndrome, and a normal control. The sensitivity, specificity, and accuracy of the DenseNet201 model were 100%, 100%, and 100%, respectively, for the intra-patient scenario and 99%, 97%, and 98%, respectively, for the inter-patient scenario. We used the intra-patient DL prediction model to validate our proposed model against the prediction results of three expert fetal cardiologists. The proposed model produces a satisfactory result, which means that our model can support expert fetal cardiologists to interpret the decision to improve CHD diagnostics. This work represents a step toward the goal of assisting front-line sonographers with CHD diagnoses at the population level.

7 June 2019 in Algorithms
Verified
Journal Article
Open access
PDF file
ADAnnisa Darmawahyuni
Annisa Darmawahyuni
Siti NurmainiSiti Nurmaini
Siti Nurmaini
SUSukemi
Sukemi
Wahyu CaesarendraWahyu Caesarendra
Wahyu Caesarendra
VBVicko Bhayyu
Vicko Bhayyu
Firdaus FirdausFirdaus Firdaus
Firdaus Firdaus
The interpretation of Myocardial Infarction (MI) via electrocardiogram (ECG) signal is a challenging task. ECG signals’ morphological view show significant variation in different patients under different physical conditions. Several learning algorithms have been studied to interpret MI. However, the drawback of machine learning is the use of heuristic features with shallow feature learning architectures. To overcome this problem, a deep learning approach is used for learning features automatically, without conventional handcrafted features. This paper presents sequence modeling based on deep learning with recurrent network for ECG-rhythm signal classification. The recurrent network architecture such as a Recurrent Neural Network (RNN) is proposed to automatically interpret MI via ECG signal. The performance of the proposed method is compared to the other recurrent network classifiers such as Long Short-Term Memory (LSTM) and Gated Recurrent Unit (GRU). The objective is to obtain the best sequence model for ECG signal processing. This paper also aims to study a proper data partitioning ratio for the training and testing sets of imbalanced data. The large imbalanced data are obtained from MI and healthy control of PhysioNet: The PTB Diagnostic ECG Database 15-lead ECG signals. According to the comparison result, the LSTM architecture shows better performance than standard RNN and GRU architecture with identical hyper-parameters. The LSTM architecture also shows better classification compared to standard recurrent networks and GRU with sensitivity, specificity, precision, F1-score, BACC, and MCC is 98.49%, 97.97%, 95.67%, 96.32%, 97.56%, and 95.32%, respectively. Apparently, deep learning with the LSTM technique is a potential method for classifying sequential data that implements time steps in the ECG signal.