Radiyati Umi Partan

Prof. Dr. Radiyati Umi Partan

orcid

Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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30 November 2021 in Sensors
Verified
Journal Article
Open access
PDF file
Siti NurmainiSiti Nurmaini
Siti Nurmaini
NRNaufal Rachmatullah
Naufal Rachmatullah
AIade iriani
ade iriani
ADAnnisa Darmawahyuni
Annisa Darmawahyuni
BTBambang Tutuko
Bambang Tutuko
NBNuswil Bernolian
Nuswil Bernolian
Accurate segmentation of fetal heart in echocardiography images is essential for detecting the structural abnormalities such as congenital heart defects (CHDs). Due to the wide variations attributed to different factors, such as maternal obesity, abdominal scars, amniotic fluid volume, and great vessel connections, this process is still a challenging problem. CHDs detection with expertise in general are substandard; the accuracy of measurements remains highly dependent on humans’ training, skills, and experience. To make such a process automatic, this study proposes deep learning-based computer-aided fetal heart echocardiography examinations with an instance segmentation approach, which inherently segments the four standard heart views and detects the defect simultaneously. We conducted several experiments with 1149 fetal heart images for predicting 24 objects, including four shapes of fetal heart standard views, 17 objects of heart-chambers in each view, and three cases of congenital heart defect. The result showed that the proposed model performed satisfactory performance for standard views segmentation, with a 79.97% intersection over union and 89.70% Dice coefficient similarity. It also performed well in the CHDs detection, with mean average precision around 98.30% for intra-patient variation and 82.42% for inter-patient variation. We believe that automatic segmentation and detection techniques could make an important contribution toward improving congenital heart disease diagnosis rates.

31 October 2022 in Journal of Clinical Medicine
Verified
Journal Article
Open access
PDF file
Siti NurmainiSiti Nurmaini
Siti Nurmaini
RPRadiyati Umi Partan
Radiyati Umi Partan
NBNuswil Bernolian
Nuswil Bernolian
AIade iriani
ade iriani
BTBambang Tutuko
Bambang Tutuko
JMJohanes Mose
Johanes Mose
Early prenatal screening with an ultrasound (US) can significantly lower newborn mortality caused by congenital heart diseases (CHDs). However, the need for expertise in fetal cardiologists and the high volume of screening cases limit the practically achievable detection rates. Hence, automated prenatal screening to support clinicians is desirable. This paper presents and analyses potential deep learning (DL) techniques to diagnose CHDs in fetal USs. Four convolutional neural network architectures were compared to select the best classifier with satisfactory results. Hence, dense convolutional network (DenseNet) 201 architecture was selected for the classification of seven CHDs, such as ventricular septal defect, atrial septal defect, atrioventricular septal defect, Ebstein’s anomaly, tetralogy of Fallot, transposition of great arteries, hypoplastic left heart syndrome, and a normal control. The sensitivity, specificity, and accuracy of the DenseNet201 model were 100%, 100%, and 100%, respectively, for the intra-patient scenario and 99%, 97%, and 98%, respectively, for the inter-patient scenario. We used the intra-patient DL prediction model to validate our proposed model against the prediction results of three expert fetal cardiologists. The proposed model produces a satisfactory result, which means that our model can support expert fetal cardiologists to interpret the decision to improve CHD diagnostics. This work represents a step toward the goal of assisting front-line sonographers with CHD diagnoses at the population level.

16 November 2023 in Journal of Clinical Medicine
Verified
Journal Article
Open access
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RPRadiyati Umi Partan
Radiyati Umi Partan
Khoirun Mukhsinin PutraKhoirun Mukhsinin Putra
Khoirun Mukhsinin Putra
NKNarisa Felinka Kusuma
Narisa Felinka Kusuma
SDSurya Darma
Surya Darma
MRMuhammad Reagan
Muhammad Reagan
ESEddy Mart Salim
Eddy Mart Salim
(1) Background: The current treatment for osteoarthritis is ineffective due to its focus on pain relief and lack of cartilage repair. Viscosupplementation such as hyaluronic acid improves symptoms but remains unnoticed for several months. Researchers are exploring cell-based therapies such as mesenchymal stem cells secretome and mesenchymal stem cells, which can repair cartilage damage. The objective of the research is to evaluate and compare the effectiveness of the secretome derived from umbilical cord mesenchymal stem cells (UC-MSCs) with hyaluronic acid (HA). (2) Methods: An open-label clinical trial involving 30 knee osteoarthritis patients divided into two groups received UC-MSC secretome and hyaluronic acid doses. The study assessed clinical outcomes using VAS and WOMAC and measured MMP-3 and TGF-β1 levels before and after treatment. (3) Results: A study of 30 subjects found that the UC-MSC secretome group showed a decrease in pain in the OA knee compared to the HA group. The therapy was most effective after the third injection, and the group showed a decrease in the MMP-3 ratio and an increase in TGF-β1 compared to the hyaluronic acid group. (4) Conclusions: UC-MSC secretome intra-articular injections showed superior clinical improvement, biomarker changes, and no side effects compared to hyaluronic acid over a 5-week interval.

29 July 2023 in Medicina
Verified
Journal Article
Open access
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FPFebriyanti Panjaitan
Febriyanti Panjaitan
Siti NurmainiSiti Nurmaini
Siti Nurmaini
RPRadiyati Umi Partan
Radiyati Umi Partan
Sudden cardiac death (SCD) is a significant global health issue that affects individuals with and without a history of heart disease. Early identification of SCD risk factors is crucial in reducing mortality rates. This study aims to utilize electrocardiogram (ECG) tools, specifically focusing on heart rate variability (HRV), to detect early SCD risk factors. In this study, we expand the comparison group dataset to include five groups: Normal Sinus Rhythm (NSR), coronary artery disease (CAD), Congestive Heart Failure (CHF), Ventricular Tachycardia (VT), and SCD. ECG signals were recorded for 30 min and segmented into 5 min intervals, following the recommended HRV feature analysis guidelines. We introduce an innovative approach to HRV signal analysis by utilizing Convolutional Neural Networks (CNN). The CNN model was optimized by tuning hyperparameters such as the number of layers, learning rate, and batch size, significantly impacting the prediction accuracy. The findings demonstrate that the HRV approach, in conjunction with linear features and the DL method, achieved a higher accuracy rate, averaging 99.30%, reaching 97% sensitivity, 99.60% specificity, and 97.87% precision. Future research should focus on further exploring and refining DL methods in the context of HRV analysis to improve SCD prediction.

17 March 2022 in Sensors
Verified
Journal Article
Open access
PDF file
BTBambang Tutuko
Bambang Tutuko
NRNaufal Rachmatullah
Naufal Rachmatullah
ADAnnisa Darmawahyuni
Annisa Darmawahyuni
Siti NurmainiSiti Nurmaini
Siti Nurmaini
ATAlexander Edo Tondas
Alexander Edo Tondas
Firdaus FirdausFirdaus Firdaus
Firdaus Firdaus
Physicians manually interpret an electrocardiogram (ECG) signal morphology in routine clinical practice. This activity is a monotonous and abstract task that relies on the experience of understanding ECG waveform meaning, including P-wave, QRS-complex, and T-wave. Such a manual process depends on signal quality and the number of leads. ECG signal classification based on deep learning (DL) has produced an automatic interpretation; however, the proposed method is used for specific abnormality conditions. When the ECG signal morphology change to other abnormalities, it cannot proceed automatically. To generalize the automatic interpretation, we aim to delineate ECG waveform. However, the output of delineation process only ECG waveform duration classes for P-wave, QRS-complex, and T-wave. It should be combined with a medical knowledge rule to produce the abnormality interpretation. The proposed model is applied for atrial fibrillation (AF) identification. This study meets the AF criteria with RR irregularities and the absence of P-waves in essential oscillations for even more accurate identification. The QT database by Physionet is utilized for developing the delineation model, and it validates with The Lobachevsky University Database. The results show that our delineation model works properly, with 98.91% sensitivity, 99.01% precision, 99.79% specificity, 99.79% accuracy, and a 98.96% F1 score. We use about 4058 normal sinus rhythm records and 1804 AF records from the experiment to identify AF conditions that are taken from three datasets. The comprehensive testing has produced higher negative predictive value and positive predictive value. This means that the proposed model can identify AF conditions from ECG signal delineation. Our approach can considerably contribute to AF diagnosis with these results.

31 May 2022 in Applied Sciences
Verified
Journal Article
Open access
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AMA. Haidar Mirza
A. Haidar Mirza
Siti NurmainiSiti Nurmaini
Siti Nurmaini
RPRadiyati Umi Partan
Radiyati Umi Partan
Impaired blood flow caused by coronary artery occlusion due to thrombus can cause damage to the heart muscle which is often called Myocardial Infarction (MI). To avoid the complexity of MI diseases such as heart failure or arrhythmias that can cause death, it is necessary to diagnose and detect them early. An electrocardiogram (ECG) signal is a diagnostic medium that can be used to detect acute MI. Diagnostics with the help of data science is very useful in detecting MI in ECG signals. The purpose of study is to propose an automatic classification framework for Myocardial Infarction (MI) with 15 lead ECG signals consisting of 12 standard leads and 3 Frank leads. This research contributes to the improvement of classification performance for 10 MI classes and normal classes. The PTB dataset trained with the proposed 1D-CNN architecture was able to produce average accuracy, sensitivity, specificity, precision and F1-score of 99.98%, 99.91%, 99.99%, 99.91, and 99.91%. From the evaluation results, it can be concluded that the proposed 1D-CNN architecture is able to provide excellent performance in detecting MI attacks.