Understanding seasonal water acquisition strategies of desert plants is critical for predicting vegetation resilience under increasing hydrological stress in arid inland river basins. In hyper-arid oases, strong evaporative demand and declining groundwater levels impose tightly coupled constraints on plant water uptake across soil–plant–atmosphere continua. In this study, we combined hydrogen and oxygen stable isotopes, Bayesian mixing models, soil moisture measurements and groundwater monitoring, and leaf δ¹³C analysis to quantify monthly water-source contributions and long-term water-use efficiency of three dominant species (Reaumuria soongarica, Tamarix ramosissima, and Populus euphratica) in the Ejina Oasis. Clear ecohydrological niche differentiation was evident among the three species. R. soongarica exhibited moderate temporal flexibility by integrating shallow and deep soil water with episodic groundwater use, whereas T. ramosissima adopted a vertically integrated and hydraulically plastic strategy combining precipitation, multi-depth soil water, and groundwater. In contrast, P. euphratica followed a conservative strategy, relying predominantly on deep soil water with only minor and transient inputs from precipitation and groundwater. Across species and seasons, deep vadose-zone soil water (120–200 cm) consistently acted as the most stable and influential reservoir, buffering seasonal drought and sustaining transpiration. T. ramosissima maintained the highest intrinsic water-use efficiency, and P. euphratica exhibited consistently lower efficiency associated with sustained access to stable deep soil water. These contrasting strategies reveal multiple pathways of hydraulic stability and plasticity that underpin vegetation persistence under progressive groundwater depletion. By linking water-source partitioning with physiological regulation, this study provides a mechanistic basis for understanding plant water-use strategies and informs ecological water management and species-specific restoration in hyper-arid inland oases.

Groundwater harbors phylogenetically diverse Candidate Phyla Radiation (CPR) bacteria, representing an ideal ecosystem for studying this microbial dark matter. However, no CPR strains have been successfully isolated from groundwater, severely limiting further research. This study employed a multi-metagenome approach, integrating time-resolved sampling, antibiotic/nutrient interventions, and microbial correlation networks to unravel CPR ecological roles in groundwater and provide insights into their subsequent cultivation. Through 36 metagenomes from a groundwater system containing at least 68 CPR phyla, we revealed the time-sensitive collapse of CPR communities: total abundance plummeted from 7.9% to 0.15% within 48 h post-sampling, driven by competition with rapidly dividing non-CPR bacteria, such as members of Pseudomonadota. Ampicillin (100 mg/L) stabilized CPR communities by suppressing competitors, whereas low-nutrient conditions paradoxically reversed this effect. Long-term enrichment (14 months) recovered 63 CPR phyla (0.35% abundance), revealing their survival resilience despite nutrient deprivation. Correlation networks prioritized Actinomyces, a novel Acidimicrobiaceae genus, Aestuariivirga, Baekduia and Caedimonadaceae as potential CPR partners, providing actionable targets for co-culture trials. Here, we propose actionable recommendations spanning groundwater sampling, activation status, identification of CPR symbiotic partners, and optimization of culture conditions, which bypass traditional blind cultivation and are critical for future efforts to cultivate CPR bacterial strains from groundwater. Cultivating CPR bacteria will contribute to clarifying their diversity, ecological roles, evolutionary mechanisms, metabolic pathways, and genetic potential.

We report the complete genome sequence of Roseomonas sp. WA12, a strain isolated from the rhizosphere soil of Artemisia ordosica , which is grown in Jungar Banner, China. The genome consists of a circular chromosome (4,787,499 bp; GC content: 69.70%) and three circular plasmids, which are named plasmid A (731,044 bp; GC: 66.04%), plasmid B (219,984 bp; GC: 65.08%), and plasmid C (44,809 bp; GC: 67.83%), respectively.

We isolated a strain of the genus Alkalibacterium from Daihai Lake in Inner Mongolia. The complete genome size is 2,614,554 bp, with a genomic DNA G + C content of 39.3%. Metabolic pathway analysis indicates that strain f15 is a potential lactic acid-fermenting bacterium with industrial applications in lactate fermentation.