Sadia Bari

Dr. Sadia Bari


Research Focus & Metrics

Academic Career Length

21Years (2006-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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9 July 2014 in Nature
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Journal Article
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CKChristopher Kupitz
Christopher Kupitz
Shibom BasuShibom Basu
Shibom Basu
IGIngo Grotjohann
Ingo Grotjohann
RFRaimund Fromme
Raimund Fromme
NZNadia A. Zatsepin
Nadia A. Zatsepin
PFPetra Fromme
Petra Fromme

10 August 2014 in Nature Methods
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Journal Article
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DADavid Arnlund
David Arnlund
LJLinda C Johansson
Linda C Johansson
CWCecilia Wickstrand
Cecilia Wickstrand
ABAnton Barty
Anton Barty
GWGarth J Williams
Garth J Williams
RNRichard Neutze
Richard Neutze
A 'protein quake' is directly monitored on the picosecond timescale using the method of time-resolved wide-angle X-ray scattering at an X-ray free-electron laser. We describe a method to measure ultrafast protein structural changes using time-resolved wide-angle X-ray scattering at an X-ray free-electron laser. We demonstrated this approach using multiphoton excitation of the Blastochloris viridis photosynthetic reaction center, observing an ultrafast global conformational change that arises within picoseconds and precedes the propagation of heat through the protein. This provides direct structural evidence for a 'protein quake': the hypothesis that proteins rapidly dissipate energy through quake-like structural motions.

2 October 2018 in Nature Communications
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MWMax O. Wiedorn
Max O. Wiedorn
DODominik Oberthür
Dominik Oberthür
RBRichard Bean
Richard Bean
RSRobin Schubert
Robin Schubert
NWNadine Werner
Nadine Werner
ABAnton Barty
Anton Barty
The new European X-ray Free-Electron Laser is the first X-ray free-electron laser capable of delivering X-ray pulses with a megahertz inter-pulse spacing, more than four orders of magnitude higher than previously possible. However, to date, it has been unclear whether it would indeed be possible to measure high-quality diffraction data at megahertz pulse repetition rates. Here, we show that high-quality structures can indeed be obtained using currently available operating conditions at the European XFEL. We present two complete data sets, one from the well-known model system lysozyme and the other from a so far unknown complex of a β-lactamase from K. pneumoniae involved in antibiotic resistance. This result opens up megahertz serial femtosecond crystallography (SFX) as a tool for reliable structure determination, substrate screening and the efficient measurement of the evolution and dynamics of molecular structures using megahertz repetition rate pulses available at this new class of X-ray laser source.

12 January 2011 in The Journal of Chemical Physics
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Journal Article
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SBSadia Bari
Sadia Bari
OGO. Gonzalez-Magaña
O. Gonzalez-Magaña
GRG. Reitsma
G. Reitsma
JWJ. Werner
J. Werner
SSStefan Schippers
Stefan Schippers
STSchlatholter Thomas
Schlatholter Thomas
Until now, photodissociation studies on free complex protonated peptides were limited to the UV wavelength range accessible by intense lasers. We have studied photodissociation of gas-phase protonated leucine–enkephalin cations for vacuum ultraviolet (VUV) photons energies ranging from 8 to 40 eV. We report time-of–flight mass spectra of the photofragments and various photofragment-yields as a function of photon energy. For sub-ionization energies our results are in line with existing studies on UV photodissociation of leucine–enkephalin. For photon energies exceeding 10 eV we could identify a new dissociation scheme in which photoabsorption leads to a fast loss of the tyrosine side chain. This loss process leads to the formation of a residual peptide that is remarkably cold internally.

6 November 2006 in Chemphyschem
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STSchlatholter Thomas
Schlatholter Thomas
FAFresia Alvarado
Fresia Alvarado
SBSadia Bari
Sadia Bari
ALAurelie Lecointre
Aurelie Lecointre
Ronnie HoekstraRonnie Hoekstra
Ronnie Hoekstra
BHBernd Huber
Bernd Huber

28 November 2018 in The Journal of Chemical Physics
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FAFelix Allum
Felix Allum
MBMichael Burt
Michael Burt
KAKasra Amini
Kasra Amini
RBRebecca Boll
Rebecca Boll
HKHansjochen Köckert
Hansjochen Köckert
DRDaniel Rolles
Daniel Rolles
The photodissociation dynamics of CH3I and CH2ClI at 272 nm were investigated by time-resolved Coulomb explosion imaging, with an intense non-resonant 815 nm probe pulse. Fragment ion momenta over a wide m/z range were recorded simultaneously by coupling a velocity map imaging spectrometer with a pixel imaging mass spectrometry camera. For both molecules, delay-dependent pump-probe features were assigned to ultraviolet-induced carbon-iodine bond cleavage followed by Coulomb explosion. Multi-mass imaging also allowed the sequential cleavage of both carbon-halogen bonds in CH2ClI to be investigated. Furthermore, delay-dependent relative fragment momenta of a pair of ions were directly determined using recoil-frame covariance analysis. These results are complementary to conventional velocity map imaging experiments and demonstrate the application of time-resolved Coulomb explosion imaging to photoinduced real-time molecular motion.