Saif Nirzhor

Mr. Saif Nirzhor

orcid

Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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29 June 2018 in Biomolecules
Verified
Journal Article
Open access
PDF file
RKRubayat Islam Khan
Rubayat Islam Khan
SNSaif Nirzhor
Saif Nirzhor
RARaushanara Akter
Raushanara Akter
Sirtuin 6 (SIRT6) is a nicotinamide adenine dinucleotide+ (NAD+) dependent enzyme and stress response protein that has sparked the curiosity of many researchers in different branches of the biomedical sciences. A unique member of the known Sirtuin family, SIRT6 has several different functions in multiple different molecular pathways related to DNA repair, glycolysis, gluconeogenesis, tumorigenesis, neurodegeneration, cardiac hypertrophic responses, and more. Only in recent times, however, did the potential usefulness of SIRT6 come to light as we learned more about its biochemical activity, regulation, biological roles, and structure Frye (2000). Even until very recently, SIRT6 was known more for chromatin signaling but, being a nascent topic of study, more information has been ascertained and its potential involvement in major human diseases including diabetes, cancer, neurodegenerative diseases, and heart disease. It is pivotal to explore the mechanistic workings of SIRT6 since future research may hold the key to engendering strategies involving SIRT6 that may have significant implications for human health and expand upon possible treatment options. In this review, we are primarily concerned with exploring the latest advances in understanding SIRT6 and how it can alter the course of several life-threatening diseases such as processes related to aging, cancer, neurodegenerative diseases, heart disease, and diabetes (SIRT6 has also shown to be involved in liver disease, inflammation, and bone-related issues) and any recent promising pharmacological investigations or potential therapeutics that are of interest.

10 September 2018 in Biomolecules
Verified
Journal Article
Open access
PDF file
SNSaif Nirzhor
Saif Nirzhor
RKRubayat Islam Khan
Rubayat Islam Khan
SNSharmind Neelotpol
Sharmind Neelotpol
Even though Alzheimer’s disease (AD) is of significant interest to the scientific community, its pathogenesis is very complicated and not well-understood. A great deal of progress has been made in AD research recently and with the advent of these new insights more therapeutic benefits may be identified that could help patients around the world. Much of the research in AD thus far has been very neuron-oriented; however, recent studies suggest that glial cells, i.e., microglia, astrocytes, oligodendrocytes, and oligodendrocyte progenitor cells (NG2 glia), are linked to the pathogenesis of AD and may offer several potential therapeutic targets against AD. In addition to a number of other functions, glial cells are responsible for maintaining homeostasis (i.e., concentration of ions, neurotransmitters, etc.) within the central nervous system (CNS) and are crucial to the structural integrity of neurons. This review explores the: (i) role of glial cells in AD pathogenesis; (ii) complex functionalities of the components involved; and (iii) potential therapeutic targets that could eventually lead to a better quality of life for AD patients.

26 August 2025
Verified
Book Chapter
Open access
Don RoosanDon Roosan
Don Roosan
RKRubayat Islam Khan
Rubayat Islam Khan
TKTiffany Khou
Tiffany Khou
SNSaif Nirzhor
Saif Nirzhor
FHFahmida Hai
Fahmida Hai
BPBrian Provencher
Brian Provencher
The objective of this paper is to investigate the structural stability, dynamic properties, and potential interactions among Amyloid Precursor Protein (APP), Tau, and Alpha-synuclein through a series of molecular dynamics simulations that integrate publicly available structural data, detailed force-field parameters, and comprehensive analytical protocols. By focusing on these three proteins, which are each implicated in various neurodegenerative disorders, the study aims to elucidate how their conformational changes and interprotein contact sites may influence larger biological processes. Through rigorous evaluation of their folding behaviors, energetic interactions, and residue-specific functions, this work contributes to the broader understanding of protein aggregation mechanisms and offers insights that may ultimately guide therapeutic intervention strategies.

26 August 2025
Verified
Book Chapter
Open access
Don RoosanDon Roosan
Don Roosan
RKRubayat Islam Khan
Rubayat Islam Khan
MAMd Rahatul Ashakin
Md Rahatul Ashakin
TKTiffany Khou
Tiffany Khou
SNSaif Nirzhor
Saif Nirzhor
MHMohammad Rifat Haider
Mohammad Rifat Haider
Accurate prediction of cancer type and primary tumor site is critical for effective diagnosis, personalized treatment, and improved outcomes. Traditional models struggle with the complexity of genomic and clinical data, but quantum computing offers enhanced computational capabilities. This study develops a hybrid quantum-classical transformer model, incorporating quantum attention mechanisms via variational quantum circuits (VQCs) to improve prediction accuracy. Using 30,000 anonymized cancer samples from the Genome Warehouse (GWH), data preprocessing included cleaning, encoding, and feature selection. Classical self-attention modules were replaced with quantum attention layers, with classical data encoded into quantum states via amplitude encoding. The model, trained using hybrid backpropagation and quantum gradient calculations, outperformed the classical transformer model, achieving 92.8% accuracy and an AUC of 0.96 compared to 87.5% accuracy and an AUC of 0.89. It also demonstrated 35% faster training and 25% fewer parameters, highlighting computational efficiency. These findings showcase the potential of quantum-enhanced transformers to advance biomedical data analysis, enabling more accurate diagnostics and personalized medicine.

29 August 2018 in Preprints.org
Verified
Preprint
Open access
RKRubayat Islam Khan
Rubayat Islam Khan
SNSaif Nirzhor
Saif Nirzhor
RARaushanara Akter
Raushanara Akter
SIRT6 is a NAD+ dependent enzyme and stress response protein that has sparked the curiosity of a plethora of researchers in different branches of the biomedical sciences. A unique member of the known Sirtuin family, SIRT6 has several different functions in several different molecular pathways related to DNA repair, glycolysis, gluconeogenesis, tumorigenesis, neurodegeneration, cardiac hypertrophic responses and so on. Only in recent times however did the potential usefulness of SIRT6 come to light as we learned more about its biochemical activity, regulation, biological roles and structure [1]. Even until very recently, SIRT6 was known more for chromatin signaling but being a nascent topic of study, more information has been ascertained and its potential involvement in major human diseases namely, diabetes, cancer, neurodegenerative diseases and heart disease has been demonstrated. It is pivotal to explore the mechanistic workings of SIRT6 since future research may hold the key to engendering strategies, involving SIRT6, that may have significant implications for human health and expand upon possible treatment options. In this review, we are primarily concerned with exploring the latest understanding of SIRT6 and how it can alter the course of several life-threatening diseases that cripple today’s society such as processes related to aging, cancer, neurodegenerative diseases, heart disease and diabetes. In addition, SIRT6 has shown to be involved in liver disease, inflammation and bone related issues but more emphasis is given to the former. Lastly, any recent promising pharmacological investigations and study of potential therapeutic targets are also delineated in this review.

29 April 2025 in Blockchain in Healthcare Today
Verified
Journal Article
Open access
PDF file
Don RoosanDon Roosan
Don Roosan
RKRubayat Islam Khan
Rubayat Islam Khan
SNSaif Nirzhor
Saif Nirzhor
FHFahmida Hai
Fahmida Hai
ContextThe study proposes and evaluates a novel cybersecurity architecture for telehealth, resilient against future quantum computing cyber threats. By integrating Post-Quantum Cryptography (PQC) with Quantum Key Distribution (QKD) and privacy-preserving mechanisms, data confidentiality and immutability for patient records in a post-quantum era are ensured. MethodsA multi-layered design approach was adopted. PQC algorithms (e.g., CRYSTALS-Dilithium) were integrated at the blockchain consensus layer to resist quantum attacks. A Directed Acyclic Graph (DAG)-based ledger managed high transaction throughput and latency constraints typical of telehealth. A QKD-enhanced key management protocol leveraged quantum channels for secure exchanges. Zero-knowledge proofs (ZKPs) and secure multiparty computation (MPC) verified transactions without exposing sensitive patient data. A granular access control model used attribute-based encryption (ABE) and smart contracts to govern which participants could view or modify encrypted medical records. ResultsThe prototype was developed within a simulated telehealth network comprising hospitals, clinics, and patient devices. PQC signatures at the consensus layer provided effective resistance to both classical and anticipated quantum attacks. QKD facilitated secure key distribution, while ZKPs and MPC enabled validation of healthcare transactions without compromising patient privacy. Despite increased computational overhead, the DAG approach efficiently handled parallel transactions, indicating improved scalability compared to traditional linear blockchains. ConclusionA QKD-enhanced, PQC-driven framework successfully addresses critical security and privacy requirements, safeguarding medical data from emerging quantum threats. Although overhead and infrastructural costs are significant, sustained cryptographic resilience and robust patient confidentiality underscore its suitability for next-generation healthcare systems. Future studies should explore additional optimizations, homomorphic encryption, and larger-scale pilots under regulatory standards.