Sulfur deficiency-induced proteins SDI1 and SDI2 play a fundamental role in sulfur homeostasis under sulfate-deprived conditions (−S) by downregulating glucosinolates. Here, we identified that besides glucosinolate regulation under –S, SDI1 downregulates another sulfur pool, the S-rich 2S seed storage proteins in Arabidopsis (Arabidopsis thaliana) seeds. We identified that MYB28 directly regulates 2S seed storage proteins by binding to the At2S4 promoter. We also showed that SDI1 downregulates 2S seed storage proteins by forming a ternary protein complex with MYB28 and MYC2, another transcription factor involved in the regulation of seed storage proteins. These findings have significant implications for the understanding of plant responses to sulfur deficiency.

SUMMARY: Senescence is a highly regulated process driven by developmental age and environmental factors. Although leaf senescence is accelerated by nitrogen (N) deficiency, the underlying physiological and molecular mechanisms are largely unknown. Here, we reveal that BBX14, a previously uncharacterized BBX‐type transcription factor in Arabidopsis, is crucial for N starvation‐induced leaf senescence. We find that inhibiting BBX14 by artificial miRNA (amiRNA) accelerates senescence during N starvation and in darkness, while BBX14 overexpression (BBX14‐OX) delays it, identifying BBX14 as a negative regulator of N starvation‐ and dark‐induced senescence. During N starvation, nitrate and amino acids like glutamic acid, glutamine, aspartic acid, and asparagine were highly retained in BBX14‐OX leaves compared to the wild type. Transcriptome analysis showed a large number of senescence‐associated genes (SAGs) to be differentially expressed between BBX14‐OX and wild‐type plants, including ETHYLENE INSENSITIVE3 (EIN3) which regulates N signaling and leaf senescence. Chromatin immunoprecipitation (ChIP) showed that BBX14 directly regulates EIN3 transcription. Furthermore, we revealed the upstream transcriptional cascade of BBX14. By yeast one‐hybrid screen and ChIP, we found that MYB44, a stress‐responsive MYB transcription factor, directly binds to the promoter of BBX14 and activates its expression. In addition, Phytochrome Interacting Factor 4 (PIF4) binds to the promoter of BBX14 to repress BBX14 transcription. Thus, BBX14 functions as a negative regulator of N starvation‐induced senescence through EIN3 and is directly regulated by PIF4 and MYB44.

Many solanaceous crops are an important part of the human daily diet. Fruit polyphenolics are plant specialized metabolites that are recognized for their human health benefits and their defensive role against plant abiotic and biotic stressors. Flavonoids and chlorogenates are the major polyphenolic compounds found in solanaceous fruits that vary in quantity, physiological function, and structural diversity among and within plant species. Despite their biological significance, the elucidation of metabolic shifts of polyphenols during fruit ripening in different fruit tissues, has not yet been well-characterized in solanaceous crops, especially at a cross-species and cross-cultivar level. Here, we performed a cross-species comparison of fruit-metabolomics to elucidate the metabolic regulation of fruit polyphenolics from three representative crops of Solanaceae (tomato, eggplant, and pepper), and a cross-cultivar comparison among different pepper cultivars (Capsicum annuum cv.) using liquid chromatography-mass spectrometry (LC-MS). We observed a metabolic trade-off between hydroxycinnamates and flavonoids in pungent pepper and anthocyanin-type pepper cultivars and identified metabolic signatures of fruit polyphenolics in each species from each different tissue-type and fruit ripening stage. Our results provide additional information for metabolomics-assisted crop improvement of solanaceous fruits towards their improved nutritive properties and enhanced stress tolerance.

The capacity for optimising grain yield depends largely on the timing of senescence and the processes underlying efficient remobilisation and cycling of nutrients from source tissues to the developing grain. This study describes how metabolism is adjusted during senescence in response to varying nitrogen application rates after anthesis. A comprehensive metabolite analysis was performed in field-grown Avalon/Cadenza using segregating doubled haploid wheat genotypes having contrasting traits relating to timing of the onset of senescence. Correlative matrices of metabolites and yield parameters determined the metabolic networks that underlie these phenotypes, and were helpful for identifying unique metabolites that are indicative of timing of senescence. They also revealed robust correlations between steady increases in hexose levels, a late senescence phenotype and high straw yield associated with low N fertiliser levels. Tryptophan, cis-aconitate, phosphate and 1-kestose demonstrated strong perturbations in response to nitrogen availability and progression towards developmental senescence. A comprehensive metabolic map of wheat leaf primary metabolites yielded a cumulative readout of processes that occur during developmental ripening and contribute to grain filling in plants with differential senescence timing.