Identifying reliable geochemical signals that reflect crustal stress evolution remains a major challenge in earthquake monitoring. Spring fluids, due to their deep circulation and rapid response, provide an important window into fault-zone processes. This study presents three years (May 2022–March 2025) of hourly hydrogen gas (H₂) concentration monitoring in spring gases from the Muji Basin on the northern Pamir Plateau, integrated with meteorological and seismic data. H₂ concentrations exhibited a stable diurnal pattern, positively correlated with water and air temperatures and negatively correlated with atmospheric pressure. Short-term anomalies during seismically quiet periods may reflect a combination of temperature-dependent solubility effects and transient degassing caused by localized gas accumulation and sudden release under heterogeneous fault and aquifer conditions. During seismically active phases, sustained increases in H₂ concentrations were also recorded; however, such anomalies did not consistently precede earthquakes, instead reflecting broader phases of tectonic instability and episodic fault-zone degassing. These findings highlight the potential of long-term H₂ monitoring to improve our understanding of the coupling between crustal stress, fluid transport, and degassing processes in tectonically active regions.