Water–fat separation is a non-linear non-convex parameter estimation problem in magnetic resonance imaging typically solved using spatial constraints. However, there is still limited knowledge on how to separate in vivo three chemical species in the presence of magnetic field inhomogeneities. The proposed method uses multiple graph-cuts in a hierarchical multi-resolution framework to perform robust chemical species separation in the breast for subjects with and without silicone implants. Experimental results show that the proposed method can decrease the computational time for water–fat separation and perform accurate water–fat–silicone separation with only a limited number of acquired echo images at 3 T. The silicone-separated images have an improved spatial resolution and image contrast compared to conventional scans used for regular monitoring of the silicone implant’s integrity.
Background: Proton-density fat fraction (PDFF) and T2* of the vertebrae, as well as the cross-sectional area (CSA) of the paraspinal musculature (PSM), have been suggested as biomarkers for bone fragility. The aim of this study was to longitudinally assess changes in PDFF, T2* and CSA of the PSM over 6 months in patients with and without osteoporosis. Methods: Opportunistic bone mineral density (BMD) measurements (BMD < 120 mg/cm3) were obtained from a CT acquired during the clinical routine work up in osteoporotic/osteopenic patients (n = 29, mean age 72.37 ± 10.12 years, 16 women). These patients were frequency-matched for age and sex to subjects with normal BMD values (n = 29). All study patients underwent 3T MR imaging at baseline and 6-month follow up, including spoiled gradient echo sequences for chemical shift encoding-based water-fat separation, from which T2* and PDFF values of the lumbar spine and the PSM were obtained. Moreover, the CSA of the PSM was assessed longitudinally. Changes in T2*, PDFF and CSA over 6 months were calculated for the vertebrae and PSM and associations with baseline BMD values were assessed. Results: The change in CSA of the PSM over 6 months was significantly lower in the osteoporotic/osteopenic group (−91.5 ± 311.7 mm2), compared to the non-osteoporotic group, in which the CSA increased (29.9 ± 164.0 mm2, p = 0.03). In a further analysis, patients with higher vertebral PDFF at baseline showed a significantly stronger increase in vertebral T2*, compared to those patients with lower vertebral PDFF at baseline (0.9 ± 1.6 ms vs. 0.0 ± 1.8 ms, p = 0.04). Moreover, patients with higher PSM PDFF at baseline showed a significantly stronger increase in vertebral T2*, compared to those patients with lower PSM PDFF at baseline (0.9 ± 2.0 ms vs. 0.0 ± 1.3 ms, p = 0.03). Conclusion: The PSM CSA decreased significantly longitudinally in patients with osteoporosis/osteopenia, compared to those without. Additionally, higher vertebral and PSM PDFF at baseline were associated with stronger changes in vertebral bone marrow T2*. Therefore, longitudinal PDFF and T2* mapping may be useful quantitative radiation-free tools for the assessment and prediction of muscle and bone health in patients with suspected osteoporosis/osteopenia.
Purpose: To develop and validate a data acquisition scheme combined with a motion‐resolved reconstruction and dictionary‐matching‐based parameter estimation to enable free‐breathing isotropic resolution self‐navigated whole‐liver simultaneous water‐specific ( ) and ( ) mapping for the characterization of diffuse and oncological liver diseases.Methods: The proposed data acquisition consists of a magnetization preparation pulse and a two‐echo gradient echo readout with a radial stack‐of‐stars trajectory, repeated with different preparations to achieve different and contrasts in a fixed acquisition time of 6 min. Regularized reconstruction was performed using self‐navigation to account for motion during the free‐breathing acquisition, followed by water–fat separation. Bloch simulations of the sequence were applied to optimize the sequence timing for insensitivity at 3 T, to correct for relaxation‐induced blurring, and to map and using a dictionary. The proposed method was validated on a water–fat phantom with varying relaxation properties and in 10 volunteers against imaging and spectroscopy reference values. The performance and robustness of the proposed method were evaluated in five patients with abdominal pathologies.Results: Simulations demonstrate good insensitivity of the proposed method in measuring and values. The proposed method produces co‐registered and maps with a good agreement with reference methods (phantom: ; ). The proposed and mapping exhibits good repeatability and can be robustly performed in patients with pathologies.Conclusions: The proposed method allows whole‐liver and quantification with high accuracy at isotropic resolution in a fixed acquisition time during free‐breathing.
5 September 2025 in Magnetic Resonance in Medicine
Purpose: To develop a method for abdominal simultaneous 3D water () and () mapping with isotropic resolution using a free‐breathing Cartesian acquisition with spiral profile ordering (CASPR) at 3 T. Methods: The proposed data acquisition combines a Look‐Locker scheme with the modified BIR‐4 adiabatic preparation pulse for simultaneous and mapping. CASPR is employed for efficient and flexible k‐space sampling at isotropic resolution during free breathing. The imaging pipeline includes subspace reconstruction, water‐fat separation, and ‐specific dictionary matching. The proposed method was validated in a water‐fat relaxometry phantom using spin echo‐based reference techniques and was compared with MOLLI and GRASE mapping in 10 volunteers. The method's flexibility was assessed at isotropic resolutions of 2.5, 3, and 3.5 mm, with corresponding scan times of 7:19, 5:23, and 3:52 min. Additionally, the method was applied to 9 oncological patients with abdominal pathologies. Results: Phantom experiments demonstrated good agreement between the proposed method and spin echo‐based reference techniques across a wide range of and values. The volunteer study assessed in vivo quantification performance and demonstrated the flexibility of the proposed method at different spatial resolutions. The 3 mm method was successively performed in patients with abdominal pathologies, whereby lesions with diameters below 1 cm could be assessed. Conclusion: The proposed Look‐Locker‐based method using CASPR enables efficient, flexible, and simultaneous and mapping at isotropic resolution in a fixed scan time during free breathing.
Neural implicit k-space representations (NIK) have shown promising results for dynamic magnetic resonance imaging (MRI) at high temporal resolutions. Yet, reducing acquisition time, and thereby available training data, results in severe performance drops due to overfitting. To address this, we introduce a novel self-supervised k-space loss function LPISCO, applicable for regularization of NIK-based reconstructions. The proposed loss function is based on the concept of parallel imaging-inspired self-consistency (PISCO), enforcing a consistent global k-space neighborhood relationship without requiring additional data. Quantitative and qualitative evaluations on static and dynamic MR reconstructions show that integrating PISCO significantly improves NIK representations, making it a competitive dynamic reconstruction method without constraining the temporal resolution. Particularly at high acceleration factors (R ≥ 50), NIK with PISCO can avoid temporal oversmoothing of state-of-the-art methods and achieves superior spatio-temporal reconstruction quality. Furthermore, an extensive analysis of the loss assumptions and stability shows PISCO's potential as versatile self-supervised k-space loss function for further applications and architectures. Code is available at: https://github.com/compai-lab/2025-pisco-spieker.
Longitudinally orientated dipoles and microstrip antennas have both demonstrated superior results as RF transmit elements for body imaging at 7 T MRI, and are as of today the most commonly used transmit elements. In this study, the performances of the two antenna concepts were compared for use in local RF antenna arrays by numerical simulations. Antenna elements investigated are the fractionated dipole and the microstrip line with meander structures. Phantom simulations with a single antenna element were performed and evaluated with regard to specific absorption rate (SAR) efficiency in the center of the subject. Simulations of array configurations with 8 and 16 elements were performed with anatomical body models. Both antenna elements were combined with a loop coil to compare hybrid configurations. Singular value decomposition of the B1+ fields, RF shimming, and calculation of the voxel‐wise power and SAR efficiencies were performed in regions of interest with varying sizes to evaluate the transmit performance. The signal‐to‐noise ratio (SNR) was evaluated to estimate the receive performance. Simulated data show similar transmit profiles for the two antenna types in the center of the phantom (penetration depth > 20 mm). For body imaging, no considerable differences were determined for the different antenna configurations with regard to the transmit performance. Results show the advantage of 16 transmit channels compared with today's commonly used 8‐channel systems (minimum RF shimming excitation error of 4.7% (4.3%) versus 2.7% (2.8%) for the 8‐channel and 16‐channel configurations with the microstrip antennas in a (5 cm)3 cube in the center of a male (female) body model). Highest SNR is achieved for the 16‐channel configuration with fractionated dipoles. The combination of either fractionated dipoles or microstrip antennas with loop coils is more favorable with regard to the transmit performance compared with only increasing the number of elements.